FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4464, 486 aa 1>>>pF1KE4464 486 - 486 aa - 486 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2453+/-0.000992; mu= 13.2483+/- 0.060 mean_var=76.5477+/-15.196, 0's: 0 Z-trim(104.9): 19 B-trim: 0 in 0/48 Lambda= 0.146591 statistics sampled from 8158 (8166) to 8158 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.251), width: 16 Scan time: 3.040 The best scores are: opt bits E(32554) CCDS6864.1 MAPKAP1 gene_id:79109|Hs108|chr9 ( 486) 3186 683.5 1.4e-196 CCDS35140.1 MAPKAP1 gene_id:79109|Hs108|chr9 ( 522) 2130 460.2 2.4e-129 CCDS35139.1 MAPKAP1 gene_id:79109|Hs108|chr9 ( 475) 2121 458.3 8.4e-129 CCDS48020.1 MAPKAP1 gene_id:79109|Hs108|chr9 ( 323) 2115 456.9 1.4e-128 CCDS35141.1 MAPKAP1 gene_id:79109|Hs108|chr9 ( 330) 1073 236.6 3.2e-62 >>CCDS6864.1 MAPKAP1 gene_id:79109|Hs108|chr9 (486 aa) initn: 3186 init1: 3186 opt: 3186 Z-score: 3643.0 bits: 683.5 E(32554): 1.4e-196 Smith-Waterman score: 3186; 100.0% identity (100.0% similar) in 486 aa overlap (1-486:1-486) 10 20 30 40 50 60 pF1KE4 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 MKEILLKAVKRRKGSQKVSGSRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 MKEILLKAVKRRKGSQKVSGSRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 YLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 YLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKE 430 440 450 460 470 480 pF1KE4 KKSGQQ :::::: CCDS68 KKSGQQ >>CCDS35140.1 MAPKAP1 gene_id:79109|Hs108|chr9 (522 aa) initn: 2114 init1: 2114 opt: 2130 Z-score: 2435.5 bits: 460.2 E(32554): 2.4e-129 Smith-Waterman score: 3077; 93.1% identity (93.1% similar) in 518 aa overlap (1-482:1-518) 10 20 30 40 50 60 pF1KE4 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 250 260 270 280 290 300 310 320 pF1KE4 MKEILLKAVKRRKGSQKVSG------------------------------------SRAD :::::::::::::::::::: :::: CCDS35 MKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRAD 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE4 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKAS 370 380 390 400 410 420 390 400 410 420 430 440 pF1KE4 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVL 430 440 450 460 470 480 450 460 470 480 pF1KE4 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ :::::::::::::::::::::::::::::::::::::: CCDS35 KVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 490 500 510 520 >>CCDS35139.1 MAPKAP1 gene_id:79109|Hs108|chr9 (475 aa) initn: 2869 init1: 2114 opt: 2121 Z-score: 2425.9 bits: 458.3 E(32554): 8.4e-129 Smith-Waterman score: 2859; 91.8% identity (94.9% similar) in 486 aa overlap (1-486:1-475) 10 20 30 40 50 60 pF1KE4 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 MKEILLKAVKRRKGSQKVSGSRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRF :::::::::::::::::::: . .:..:. ..:. :. :. . .: .: CCDS35 MKEILLKAVKRRKGSQKVSGPQYR--LEKQSEPNVAV--DLDSTLESQS-------AWEF 310 320 330 340 370 380 390 400 410 420 pF1KE4 TTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLT . .::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 CLVRENSISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLT 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE4 YLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 YLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKE 410 420 430 440 450 460 pF1KE4 KKSGQQ :::::: CCDS35 KKSGQQ 470 >>CCDS48020.1 MAPKAP1 gene_id:79109|Hs108|chr9 (323 aa) initn: 2115 init1: 2115 opt: 2115 Z-score: 2421.8 bits: 456.9 E(32554): 1.4e-128 Smith-Waterman score: 2115; 99.7% identity (100.0% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE4 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKIHPPSMPGDSGSEIQGSNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 TQGYVYAQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNIQWKERNSKQSAQEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 KSLFEKKSLKEKPPISGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 LPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 VDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 MKEILLKAVKRRKGSQKVSGSRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRF ::::::::::::::::::::. CCDS48 MKEILLKAVKRRKGSQKVSGACD 310 320 >>CCDS35141.1 MAPKAP1 gene_id:79109|Hs108|chr9 (330 aa) initn: 1073 init1: 1073 opt: 1073 Z-score: 1230.6 bits: 236.6 E(32554): 3.2e-62 Smith-Waterman score: 1820; 89.1% identity (89.1% similar) in 330 aa overlap (193-486:1-330) 170 180 190 200 210 220 pF1KE4 FDGKGHVGTTATKKIDVYLPLHSSQDRLLPMTVVTMASARVQDLIGLICWQYTSEGREPK :::::::::::::::::::::::::::::: CCDS35 MTVVTMASARVQDLIGLICWQYTSEGREPK 10 20 30 230 240 250 260 270 280 pF1KE4 LNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 LNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVR 40 50 60 70 80 90 290 300 310 320 pF1KE4 INAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKVSG---------------------- :::::::::::::::::::::::::::::::::::::: CCDS35 INAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAVDLDSTLE 100 110 120 130 140 150 330 340 350 360 pF1KE4 --------------SRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQL :::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SQSAWEFCLVRENSSRADGVFEEDSQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQL 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE4 GISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHD 220 230 240 250 260 270 430 440 450 460 470 480 pF1KE4 YKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 YKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 280 290 300 310 320 330 486 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:56:30 2016 done: Sun Nov 6 00:56:31 2016 Total Scan time: 3.040 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]