FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3642, 316 aa 1>>>pF1KE3642 316 - 316 aa - 316 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8943+/-0.000822; mu= 12.1991+/- 0.049 mean_var=63.7386+/-12.556, 0's: 0 Z-trim(106.8): 34 B-trim: 42 in 1/51 Lambda= 0.160647 statistics sampled from 9181 (9212) to 9181 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.283), width: 16 Scan time: 2.420 The best scores are: opt bits E(32554) CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 ( 316) 2095 494.1 5.9e-140 CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 ( 313) 1452 345.1 4.2e-95 CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 ( 329) 1356 322.8 2.2e-88 CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 ( 260) 253 67.2 1.6e-11 CCDS2891.1 KCTD6 gene_id:200845|Hs108|chr3 ( 237) 245 65.3 5.3e-11 >>CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 (316 aa) initn: 2095 init1: 2095 opt: 2095 Z-score: 2626.2 bits: 494.1 E(32554): 5.9e-140 Smith-Waterman score: 2095; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316) 10 20 30 40 50 60 pF1KE3 MSGDTCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRHDTMLKAMFSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MSGDTCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRHDTMLKAMFSGR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 MEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNMC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSDDHLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSDDHLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQTKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQTKVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FPEARIYEETLNVLLYETPRVPDNSLLEATSRSRSQASPSEDEETFELRDRVRRIHVKRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FPEARIYEETLNVLLYETPRVPDNSLLEATSRSRSQASPSEDEETFELRDRVRRIHVKRY 250 260 270 280 290 300 310 pF1KE3 STYDDRQLGHQSTHRD :::::::::::::::: CCDS11 STYDDRQLGHQSTHRD 310 >>CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 (313 aa) initn: 880 init1: 780 opt: 1452 Z-score: 1820.9 bits: 345.1 E(32554): 4.2e-95 Smith-Waterman score: 1452; 70.7% identity (88.2% similar) in 314 aa overlap (1-311:4-313) 10 20 30 40 50 pF1KE3 MSGDTCLCPA-SGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRHDTMLKAM :::.. . : .: . ..::: . ..:::.:::::.:::::...::..::::::: CCDS91 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 FSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGL ::::::::::.:::::::::::::::::::::: .. ::..:.::.::.:::::::.::: CCDS91 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 VNMCQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSD :. ::.:::.: :.:.: :..:.::: :::..:: .:.::.::::::::::::::::::: CCDS91 VEECQAALQNK-DTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSD 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 DHLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQ :..::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: CCDS91 DNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQ 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 TKVEFPEARIYEETLNVLLYETP--RVPDNSLLEATSRSRSQASPSEDEETFELRDRVRR ::::::::::::::::.::::. : :::.:::::. . ... ...: : .:::: CCDS91 TKVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRR 240 250 260 270 280 290 300 310 pF1KE3 IHVKRYSTYDDRQLGHQSTHRD ::.:: ::: :: CCDS91 IHIKRP---DDRAHLHQ 300 310 >>CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 (329 aa) initn: 1389 init1: 1343 opt: 1356 Z-score: 1700.2 bits: 322.8 E(32554): 2.2e-88 Smith-Waterman score: 1361; 64.4% identity (84.4% similar) in 326 aa overlap (2-316:6-329) 10 20 30 40 pF1KE3 MSGDTCLCPASGAKPKLSGFKGG----GL-----GNKYVQLNVGGSLYYTTVRALT :: . : :: ::.. : :: ..:::.:::::::.:::.:.:: CCDS10 MSAEASGPAAAAAPSLEAPKPSGLEPGPAAYGLKPLTPNSKYVKLNVGGSLHYTTLRTLT 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 RHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAE .:::::::::::.::::: ::.:::: :.::::::::::: .. ::.. .:. ::..: CCDS10 GQDTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGE 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 AKYYLIQGLVNMCQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNN :.:::.:::.. :: :::.:... .:.: ::..:: .::..:. :..:::::::.::::: CCDS10 ARYYLVQGLIEDCQLALQQKRETLSPLCLIPMVTSPREEQQLLASTSKPVVKLLHNRSNN 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 KYSYTSNSDDHLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTS ::::::.:::.:::::::::::.:::.::.::.:::.:::::::::::::::.::::::: CCDS10 KYSYTSTSDDNLLKNIELFDKLALRFHGRLLFLKDVLGDEICCWSFYGQGRKIAEVCCTS 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE3 IVYATEKKQTKVEFPEARIYEETLNVLLYETPRVPDNSLLEATSRSRSQ--ASPSEDEET :::::::::::::::::::.:::::.:.::::: :: .:::::. . . :. .::::. CCDS10 IVYATEKKQTKVEFPEARIFEETLNILIYETPRGPDPALLEATGGAAGAGGAGRGEDEEN 250 260 270 280 290 300 290 300 310 pF1KE3 FELRDRVRRIHVKRYSTYDDRQLGHQSTHRD : :::::::.:. :.:.: :.: . .: CCDS10 RE--HRVRRIHVRRHITHDERPHGQQIVFKD 310 320 >>CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 (260 aa) initn: 275 init1: 200 opt: 253 Z-score: 320.4 bits: 67.2 E(32554): 1.6e-11 Smith-Waterman score: 260; 34.3% identity (61.0% similar) in 172 aa overlap (30-199:5-164) 10 20 30 40 50 pF1KE3 MSGDTCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRH-DTMLKAMFSG . :::::.:: :.. .:: :.:: ::::: CCDS31 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSG 10 20 30 60 70 80 90 100 110 pF1KE3 RMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNM .: . :..: .::: :: : :::.:: . . ::.. ::. : :: .: .: :.. CCDS31 KMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIE- 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 CQSALQDKK-DSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSDDH :::.:. . . : . .:... . .. ... . .. :: .:.: . CCDS31 ---ALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQI--------YSLSSSSMEV 100 110 120 130 140 180 190 200 210 220 230 pF1KE3 LLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQTK . :: . : :.. : :: CCDS31 FNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTKQ 150 160 170 180 190 200 >>CCDS2891.1 KCTD6 gene_id:200845|Hs108|chr3 (237 aa) initn: 242 init1: 167 opt: 245 Z-score: 311.1 bits: 65.3 E(32554): 5.3e-11 Smith-Waterman score: 245; 37.1% identity (63.6% similar) in 140 aa overlap (23-161:7-140) 10 20 30 40 50 pF1KE3 MSGDTCLCPASGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRH-DTMLKAMFSG : . . : ::::: :: :.. .:::. :.:: :::.: CCDS28 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGG 10 20 30 40 60 70 80 90 100 110 pF1KE3 RMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNM . . : .: .::: : : .::.:: . .::: . .:. : :: .: :. :.. CCDS28 DFPTARDPQGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQ- 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 CQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSDDHL : :.: : : :. .. .. :. ..: . :. ::. .. CCDS28 C---LNDPKPLY-PMDTFEEVVELSSTRKLSKYSN-PVAVIITQLTITTKVHSLLEGISN 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 LKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQTKV CCDS28 YFTKWNKHMMDTRDCQVSFTFGPCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERAN 160 170 180 190 200 210 316 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:47:34 2016 done: Mon Nov 7 02:47:35 2016 Total Scan time: 2.420 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]