Result of FASTA (omim) for
pFN21AE5610
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5610, 584 aa
1>>>pF1KE5610 584 - 584 aa - 584 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4819+/-0.000354; mu= 13.5297+/- 0.022
mean_var=95.6406+/-19.490, 0's: 0 Z-trim(115.7): 18 B-trim: 807 in 1/51
Lambda= 0.131145
statistics sampled from 26246 (26263) to 26246 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.308), width: 16
Scan time: 8.090
The best scores are: opt bits E(85289)
NP_008824 (OMIM: 613709) eukaryotic translation in ( 584) 3871 742.9 6.5e-214
XP_011507559 (OMIM: 613709) PREDICTED: eukaryotic ( 581) 3721 714.6 2.3e-205
XP_006711259 (OMIM: 613709) PREDICTED: eukaryotic ( 434) 2890 557.3 3.8e-158
XP_005277566 (OMIM: 613709) PREDICTED: eukaryotic ( 534) 2316 448.7 2.2e-125
XP_011507560 (OMIM: 613709) PREDICTED: eukaryotic ( 326) 1990 386.9 5.4e-107
NP_001188407 (OMIM: 613709) eukaryotic translation ( 460) 1902 370.4 7.5e-102
XP_016856019 (OMIM: 613709) PREDICTED: eukaryotic ( 424) 1890 368.1 3.4e-101
XP_016856021 (OMIM: 613709) PREDICTED: eukaryotic ( 384) 1335 263.0 1.3e-69
XP_016856020 (OMIM: 613709) PREDICTED: eukaryotic ( 410) 1220 241.3 4.7e-63
NP_054779 (OMIM: 300587) malignant T-cell-amplifie ( 181) 212 50.4 6.1e-06
NP_001131026 (OMIM: 300587) malignant T-cell-ampli ( 182) 210 50.0 7.9e-06
>>NP_008824 (OMIM: 613709) eukaryotic translation initia (584 aa)
initn: 3871 init1: 3871 opt: 3871 Z-score: 3961.4 bits: 742.9 E(85289): 6.5e-214
Smith-Waterman score: 3871; 100.0% identity (100.0% similar) in 584 aa overlap (1-584:1-584)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
490 500 510 520 530 540
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
NP_008 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
550 560 570 580
>>XP_011507559 (OMIM: 613709) PREDICTED: eukaryotic tran (581 aa)
initn: 3744 init1: 3719 opt: 3721 Z-score: 3808.0 bits: 714.6 E(85289): 2.3e-205
Smith-Waterman score: 3721; 98.1% identity (98.6% similar) in 575 aa overlap (1-573:1-575)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
490 500 510 520 530 540
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLP--RKHIQGLEKALKPGKKK
:::::::::::::::::::::.. .:: :
XP_011 KDSLQVQIQGNQVHHLGWLLLDNKTEAEFKKHACGPLLVRS
550 560 570 580
>>XP_006711259 (OMIM: 613709) PREDICTED: eukaryotic tran (434 aa)
initn: 2890 init1: 2890 opt: 2890 Z-score: 2960.2 bits: 557.3 E(85289): 3.8e-158
Smith-Waterman score: 2890; 100.0% identity (100.0% similar) in 434 aa overlap (151-584:1-434)
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::
XP_006 MSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
10 20 30
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
280 290 300 310 320 330
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
340 350 360 370 380 390
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
400 410 420 430
>>XP_005277566 (OMIM: 613709) PREDICTED: eukaryotic tran (534 aa)
initn: 2316 init1: 2316 opt: 2316 Z-score: 2371.9 bits: 448.7 E(85289): 2.2e-125
Smith-Waterman score: 3414; 91.4% identity (91.4% similar) in 584 aa overlap (1-584:1-534)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPR---------
310 320 330 340 350
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
:::::::::::::::::::
XP_005 -----------------------------------------KGSFLEGSEVRTIVINYAK
360 370
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
380 390 400 410 420 430
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
440 450 460 470 480 490
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
XP_005 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
500 510 520 530
>>XP_011507560 (OMIM: 613709) PREDICTED: eukaryotic tran (326 aa)
initn: 1982 init1: 1982 opt: 1990 Z-score: 2041.8 bits: 386.9 E(85289): 5.4e-107
Smith-Waterman score: 1990; 97.7% identity (99.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
: :. ...
XP_011 CFAGHTISVATARCCHCSTNVTIDSR
310 320
>>NP_001188407 (OMIM: 613709) eukaryotic translation ini (460 aa)
initn: 3037 init1: 1902 opt: 1902 Z-score: 1949.6 bits: 370.4 E(85289): 7.5e-102
Smith-Waterman score: 2793; 78.8% identity (78.8% similar) in 584 aa overlap (1-584:1-460)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHL----
130 140 150 160 170
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
NP_001 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
NP_001 ------------------------------------------------------------
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
180 190 200 210 220 230
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
240 250 260 270 280 290
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
300 310 320 330 340 350
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
360 370 380 390 400 410
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
420 430 440 450 460
>>XP_016856019 (OMIM: 613709) PREDICTED: eukaryotic tran (424 aa)
initn: 2796 init1: 1889 opt: 1890 Z-score: 1937.8 bits: 368.1 E(85289): 3.4e-101
Smith-Waterman score: 2479; 72.4% identity (72.4% similar) in 584 aa overlap (1-584:1-424)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::
XP_016 PAGLPQVQKGDLCAISLVGNS---------------------------------------
130 140
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
XP_016 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
XP_016 ------------------------------------------------------------
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -PEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
150 160 170 180 190 200
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
210 220 230 240 250 260
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
270 280 290 300 310 320
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
330 340 350 360 370 380
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
390 400 410 420
>>XP_016856021 (OMIM: 613709) PREDICTED: eukaryotic tran (384 aa)
initn: 1335 init1: 1335 opt: 1335 Z-score: 1371.0 bits: 263.0 E(85289): 1.3e-69
Smith-Waterman score: 2433; 88.5% identity (88.5% similar) in 434 aa overlap (151-584:1-384)
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::
XP_016 MSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
10 20 30
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPR---------
160 170 180 190 200
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
:::::::::::::::::::
XP_016 -----------------------------------------KGSFLEGSEVRTIVINYAK
210 220
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
230 240 250 260 270 280
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
290 300 310 320 330 340
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
350 360 370 380
>>XP_016856020 (OMIM: 613709) PREDICTED: eukaryotic tran (410 aa)
initn: 2355 init1: 1220 opt: 1220 Z-score: 1253.0 bits: 241.3 E(85289): 4.7e-63
Smith-Waterman score: 2336; 70.2% identity (70.2% similar) in 584 aa overlap (1-584:1-410)
10 20 30 40 50 60
pF1KE5 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHL----
130 140 150 160 170
190 200 210 220 230 240
pF1KE5 NKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSE
XP_016 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE5 APEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSC
XP_016 ------------------------------------------------------------
310 320 330 340 350 360
pF1KE5 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPRITSFVIPEP
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWKHPR---------
180 190 200 210 220
370 380 390 400 410 420
pF1KE5 SPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAK
:::::::::::::::::::
XP_016 -----------------------------------------KGSFLEGSEVRTIVINYAK
230 240
430 440 450 460 470 480
pF1KE5 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQE
250 260 270 280 290 300
490 500 510 520 530 540
pF1KE5 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGA
310 320 330 340 350 360
550 560 570 580
pF1KE5 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK
370 380 390 400 410
>>NP_054779 (OMIM: 300587) malignant T-cell-amplified se (181 aa)
initn: 127 init1: 127 opt: 212 Z-score: 227.7 bits: 50.4 E(85289): 6.1e-06
Smith-Waterman score: 212; 28.0% identity (56.6% similar) in 182 aa overlap (1-177:1-175)
10 20 30 40 50
pF1KE5 MFAKAFRVKSNTA----IKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAH
:: : : : :.. .: : . .. .. :: . .....: :. ..::. . :
NP_054 MF-KKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGI-EPWLNQIMPKKDPVKIVRCHEH
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 KGDAVTVYVSGGNPILF-ELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLP
. . . .:. ..: . : .:::. : .:: .:: . ... ...::..: :
NP_054 ----IEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 GLVMPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDH
::. : : : . . :: :.. . .:: :: :: . . :: :. .: .:
NP_054 GLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMS-AEDIEKVNKGIGIENIHYLNDG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 LWRSGNKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHMTLEGEEENGEVHQARED
::
NP_054 LWHMKTYK
180
584 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:07:37 2016 done: Tue Nov 8 05:07:39 2016
Total Scan time: 8.090 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]