FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4337, 348 aa 1>>>pF1KE4337 348 - 348 aa - 348 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1706+/-0.000917; mu= 16.8502+/- 0.055 mean_var=63.8062+/-13.020, 0's: 0 Z-trim(105.0): 15 B-trim: 0 in 0/50 Lambda= 0.160562 statistics sampled from 8153 (8167) to 8153 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.251), width: 16 Scan time: 2.360 The best scores are: opt bits E(32554) CCDS242.1 GALE gene_id:2582|Hs108|chr1 ( 348) 2343 551.5 3.7e-157 >>CCDS242.1 GALE gene_id:2582|Hs108|chr1 (348 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2935.0 bits: 551.5 E(32554): 3.7e-157 Smith-Waterman score: 2343; 100.0% identity (100.0% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 pF1KE4 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR 250 260 270 280 290 300 310 320 330 340 pF1KE4 EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA :::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA 310 320 330 340 348 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:12:36 2016 done: Sun Nov 6 02:12:37 2016 Total Scan time: 2.360 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]