FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1389, 383 aa 1>>>pF1KE1389 383 - 383 aa - 383 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4561+/-0.000911; mu= 15.8328+/- 0.055 mean_var=66.4701+/-13.403, 0's: 0 Z-trim(106.1): 22 B-trim: 0 in 0/50 Lambda= 0.157312 statistics sampled from 8759 (8765) to 8759 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.269), width: 16 Scan time: 2.490 The best scores are: opt bits E(32554) CCDS1763.1 BRE gene_id:9577|Hs108|chr2 ( 383) 2626 604.9 3.8e-173 CCDS1764.1 BRE gene_id:9577|Hs108|chr2 ( 415) 2497 575.6 2.7e-164 CCDS1765.1 BRE gene_id:9577|Hs108|chr2 ( 376) 2494 574.9 3.9e-164 >>CCDS1763.1 BRE gene_id:9577|Hs108|chr2 (383 aa) initn: 2626 init1: 2626 opt: 2626 Z-score: 3221.9 bits: 604.9 E(32554): 3.8e-173 Smith-Waterman score: 2626; 100.0% identity (100.0% similar) in 383 aa overlap (1-383:1-383) 10 20 30 40 50 60 pF1KE1 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 310 320 330 340 350 360 370 380 pF1KE1 RAKAYFKTFVPQFQEAAFANGKL ::::::::::::::::::::::: CCDS17 RAKAYFKTFVPQFQEAAFANGKL 370 380 >>CCDS1764.1 BRE gene_id:9577|Hs108|chr2 (415 aa) initn: 2494 init1: 2494 opt: 2497 Z-score: 3063.2 bits: 575.6 E(32554): 2.7e-164 Smith-Waterman score: 2497; 95.8% identity (96.6% similar) in 385 aa overlap (1-382:1-385) 10 20 30 40 50 60 pF1KE1 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 310 320 330 340 350 360 370 380 pF1KE1 RAKA---YFKTFVPQFQEAAFANGKL :::. . : : ::: .: CCDS17 RAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERTAQ 370 380 390 400 410 >>CCDS1765.1 BRE gene_id:9577|Hs108|chr2 (376 aa) initn: 2494 init1: 2494 opt: 2494 Z-score: 3060.2 bits: 574.9 E(32554): 3.9e-164 Smith-Waterman score: 2494; 100.0% identity (100.0% similar) in 363 aa overlap (1-363:1-363) 10 20 30 40 50 60 pF1KE1 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 310 320 330 340 350 360 370 380 pF1KE1 RAKAYFKTFVPQFQEAAFANGKL ::: CCDS17 RAKRESNRDGEESSSA 370 383 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:52:48 2016 done: Mon Nov 7 02:52:48 2016 Total Scan time: 2.490 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]