FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9139, 487 aa 1>>>pF1KB9139 487 - 487 aa - 487 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1356+/-0.00075; mu= 15.0062+/- 0.045 mean_var=94.4667+/-19.096, 0's: 0 Z-trim(110.9): 3 B-trim: 0 in 0/54 Lambda= 0.131958 statistics sampled from 11931 (11933) to 11931 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.367), width: 16 Scan time: 3.130 The best scores are: opt bits E(32554) CCDS7696.1 PTDSS2 gene_id:81490|Hs108|chr11 ( 487) 3477 672.0 4e-193 CCDS6271.1 PTDSS1 gene_id:9791|Hs108|chr8 ( 473) 844 170.7 3e-42 >>CCDS7696.1 PTDSS2 gene_id:81490|Hs108|chr11 (487 aa) initn: 3477 init1: 3477 opt: 3477 Z-score: 3580.7 bits: 672.0 E(32554): 4e-193 Smith-Waterman score: 3477; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487) 10 20 30 40 50 60 pF1KB9 MRRGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MRRGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 WRAHTLTVLFILTCTLGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 WRAHTLTVLFILTCTLGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 HPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 HPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 NETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 CWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 CWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 VRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 AMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 VLALTWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VLALTWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEG 430 440 450 460 470 480 pF1KB9 EGAPTPN ::::::: CCDS76 EGAPTPN >>CCDS6271.1 PTDSS1 gene_id:9791|Hs108|chr8 (473 aa) initn: 733 init1: 400 opt: 844 Z-score: 871.9 bits: 170.7 E(32554): 3e-42 Smith-Waterman score: 844; 34.4% identity (64.8% similar) in 395 aa overlap (44-429:22-404) 20 30 40 50 60 70 pF1KB9 PESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFFWRAHTLTVLFILT : .:..: .: : ::.: ::.:.: . CCDS62 MASCVGSRTLSKDDVNYKMHFRMINEQQV-EDITIDFFYRPHTITLLSFTI 10 20 30 40 50 80 90 100 110 120 130 pF1KB9 CTLGYVTLLEE--TPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCV .: : .. .. .:.: : :::.. :. :: ..: .:::.::::: ::. . . CCDS62 VSLMYFAFTRDDSVPED---NIWRGILSVIFFFLIISVLAFPNGPFTRPHPALWRMVFGL 60 70 80 90 100 140 150 160 170 180 pF1KB9 SVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERD---YGGNCLIYDPDNETDPFHN ::.: :::.:.:: . .. .... ..::.: : : :. :: . .. CCDS62 SVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATREADVMEYAVNCHVIT-------WER 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 IWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIM : ...: :. .:: :: .:.:.::.. .: ::. .:. : . : ::::.:::::. :. CCDS62 IISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWELTELFFMHLLPNFAECWWDQVIL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 DVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSWVRFEW-KP :.:.::: ::. :: . ..: ..::.: .. .: : ::.:: ..:::: ::. .: : CCDS62 DILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFDP 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 ASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYD ::..: .: ..... :.:::::.:: .. . : : :..:. .. . ..:. : CCDS62 KSSFQRVAGVYLFMIIWQLTELNTFFLKHIFVFQASHPLSWGRILFIGGITAPTVRQYYA 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 FMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQ---CWTLGSVLAL .. : . :..: : :. ..: : .. .:. .. . .:. : .. . : : CCDS62 YLTDTQ-CKRVGTQCWVFGVIGFLEAIVCIKFGQDLFSKTQILYVVLWLLCVAFTTFLCL 350 360 370 380 390 430 440 450 460 470 480 pF1KB9 TWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEGEGAP .: CCDS62 YGMIWYAEHYGHREKTYSECEDGTYSPEISWHHRKGTKGSEDSPPKHAGNNESHSSRRRN 400 410 420 430 440 450 487 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 20:56:38 2016 done: Mon Nov 7 20:56:39 2016 Total Scan time: 3.130 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]