Result of FASTA (ccds) for
pFN21AE6107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6107, 157 aa
1>>>pF1KE6107 157 - 157 aa - 157 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9697+/-0.000768; mu= 13.4242+/- 0.046
mean_var=56.4552+/-11.291, 0's: 0 Z-trim(106.5): 34 B-trim: 10 in 1/49
Lambda= 0.170696
statistics sampled from 8964 (8997) to 8964 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.276), width: 16
Scan time: 1.250
The best scores are: opt bits E(32554)
CCDS14173.1 AP1S2 gene_id:8905|Hs108|chrX ( 157) 1021 259.2 7.5e-70
CCDS75958.1 AP1S2 gene_id:8905|Hs108|chrX ( 160) 1005 255.3 1.2e-68
CCDS47669.1 AP1S1 gene_id:1174|Hs108|chr7 ( 158) 927 236.1 7e-63
CCDS42827.1 AP1S3 gene_id:130340|Hs108|chr2 ( 154) 766 196.4 5.9e-51
CCDS33062.1 AP2S1 gene_id:1175|Hs108|chr19 ( 142) 460 121.0 2.7e-28
CCDS77322.1 AP2S1 gene_id:1175|Hs108|chr19 ( 144) 460 121.0 2.7e-28
CCDS77321.1 AP2S1 gene_id:1175|Hs108|chr19 ( 158) 460 121.1 2.9e-28
CCDS45093.1 AP4S1 gene_id:11154|Hs108|chr14 ( 144) 389 103.6 4.9e-23
CCDS10357.1 AP3S2 gene_id:10239|Hs108|chr15 ( 193) 349 93.8 5.8e-20
CCDS83021.1 AP3S1 gene_id:1176|Hs108|chr5 ( 162) 346 93.0 8.4e-20
CCDS4123.1 AP3S1 gene_id:1176|Hs108|chr5 ( 193) 344 92.5 1.4e-19
CCDS77323.1 AP2S1 gene_id:1175|Hs108|chr19 ( 156) 335 90.3 5.3e-19
CCDS58309.1 AP4S1 gene_id:11154|Hs108|chr14 ( 149) 301 81.9 1.7e-16
CCDS9642.1 AP4S1 gene_id:11154|Hs108|chr14 ( 159) 301 81.9 1.8e-16
CCDS55977.1 AP3S2 gene_id:100526783|Hs108|chr15 ( 394) 302 82.4 3.3e-16
CCDS58310.1 AP4S1 gene_id:11154|Hs108|chr14 ( 135) 280 76.7 5.6e-15
>>CCDS14173.1 AP1S2 gene_id:8905|Hs108|chrX (157 aa)
initn: 1021 init1: 1021 opt: 1021 Z-score: 1367.6 bits: 259.2 E(32554): 7.5e-70
Smith-Waterman score: 1021; 100.0% identity (100.0% similar) in 157 aa overlap (1-157:1-157)
10 20 30 40 50 60
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
70 80 90 100 110 120
130 140 150
pF1KE6 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
:::::::::::::::::::::::::::::::::::::
CCDS14 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
130 140 150
>>CCDS75958.1 AP1S2 gene_id:8905|Hs108|chrX (160 aa)
initn: 954 init1: 940 opt: 1005 Z-score: 1346.2 bits: 255.3 E(32554): 1.2e-68
Smith-Waterman score: 1005; 98.1% identity (98.1% similar) in 160 aa overlap (1-157:1-160)
10 20 30 40 50 60
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
70 80 90 100 110 120
130 140 150
pF1KE6 EVQETSKKNVLKAIEQADLLQE---EAETPRSVLEEIGLT
:::::::::::::::::::::: :::::::::::::::
CCDS75 EVQETSKKNVLKAIEQADLLQEDAKEAETPRSVLEEIGLT
130 140 150 160
>>CCDS47669.1 AP1S1 gene_id:1174|Hs108|chr7 (158 aa)
initn: 927 init1: 927 opt: 927 Z-score: 1242.4 bits: 236.1 E(32554): 7e-63
Smith-Waterman score: 927; 87.8% identity (97.4% similar) in 156 aa overlap (1-156:2-157)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
:.:::::::::::::::::. ::::.::..:::.:.::::::::::::::::::.:::
CCDS47 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
:::::::::::: :::::::::.:::::::::::::::::::::::::::::::::::.:
CCDS47 RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG
70 80 90 100 110 120
120 130 140 150
pF1KE6 GEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
:.::.::::.:::::::::::::: :.:::::::.::
CCDS47 GDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
130 140 150
>>CCDS42827.1 AP1S3 gene_id:130340|Hs108|chr2 (154 aa)
initn: 785 init1: 753 opt: 766 Z-score: 1028.3 bits: 196.4 E(32554): 5.9e-51
Smith-Waterman score: 766; 75.2% identity (93.1% similar) in 145 aa overlap (1-145:2-146)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
..:.:::::::::::::::. : :::.::::::.:: .:.: . ::..:..::.:::
CCDS42 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
::::::::::::.:::::.::::.::::::::::::.::::::::::::::::::::..:
CCDS42 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
70 80 90 100 110 120
120 130 140 150
pF1KE6 GEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
::.:::::: ..::::..:.::: :
CCDS42 GEIQETSKKIAVKAIEDSDMLQETMEEYMNKPTF
130 140 150
>>CCDS33062.1 AP2S1 gene_id:1175|Hs108|chr19 (142 aa)
initn: 437 init1: 437 opt: 460 Z-score: 621.6 bits: 121.0 E(32554): 2.7e-28
Smith-Waterman score: 460; 47.8% identity (80.6% similar) in 134 aa overlap (1-134:2-135)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
..:.:. .: :: :: :::. ..: ::.:. .:. .: .: : .:.:.:..::.:.
CCDS33 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
:::.:::: .. .::.: :: :: .::.:..:: .:::::..::: :.: ..::..:.
CCDS33 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA
70 80 90 100 110 120
120 130 140 150
pF1KE6 GEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
::..:::. .::: .
CCDS33 GEIRETSQTKVLKQLLMLQSLE
130 140
>>CCDS77322.1 AP2S1 gene_id:1175|Hs108|chr19 (144 aa)
initn: 437 init1: 437 opt: 460 Z-score: 621.5 bits: 121.0 E(32554): 2.7e-28
Smith-Waterman score: 460; 47.8% identity (80.6% similar) in 134 aa overlap (1-134:4-137)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIV
..:.:. .: :: :: :::. ..: ::.:. .:. .: .: : .:.:.:..::.
CCDS77 MVWIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKII
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 YKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL
:.:::.:::: .. .::.: :: :: .::.:..:: .:::::..::: :.: ..::..
CCDS77 YRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF
70 80 90 100 110 120
120 130 140 150
pF1KE6 LGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
:.::..:::. .::: .
CCDS77 LAGEIRETSQTKVLKQLLMLQSLE
130 140
>>CCDS77321.1 AP2S1 gene_id:1175|Hs108|chr19 (158 aa)
initn: 437 init1: 437 opt: 460 Z-score: 620.9 bits: 121.1 E(32554): 2.9e-28
Smith-Waterman score: 460; 47.8% identity (80.6% similar) in 134 aa overlap (1-134:18-151)
10 20 30 40
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKP
..:.:. .: :: :: :::. ..: ::.:. .:. .: .:
CCDS77 MKLKGLGKRCKRREDLEIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 KMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDII
: .:.:.:..::.:.:::.:::: .. .::.: :: :: .::.:..:: .:::::..
CCDS77 KHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLV
70 80 90 100 110 120
110 120 130 140 150
pF1KE6 FNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
::: :.: ..::..:.::..:::. .::: .
CCDS77 FNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE
130 140 150
>>CCDS45093.1 AP4S1 gene_id:11154|Hs108|chr14 (144 aa)
initn: 380 init1: 360 opt: 389 Z-score: 527.0 bits: 103.6 E(32554): 4.9e-23
Smith-Waterman score: 389; 36.6% identity (78.9% similar) in 142 aa overlap (1-142:2-143)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
..:.:. ..::. ::.:.: .. ... . :.... :.:. ..:::.:..:.:..:.
CCDS45 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
.::.:.. ...: .::. :.:: .::.::.::. : ::::.::..:...::::..:.
CCDS45 QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLN
70 80 90 100 110 120
120 130 140 150
pF1KE6 GEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
: . ::.. .: . : ..:
CCDS45 GCIVETNRARILAPLLILDKMSES
130 140
>>CCDS10357.1 AP3S2 gene_id:10239|Hs108|chr15 (193 aa)
initn: 331 init1: 227 opt: 349 Z-score: 471.8 bits: 93.8 E(32554): 5.8e-20
Smith-Waterman score: 349; 37.2% identity (72.3% similar) in 148 aa overlap (1-142:2-149)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEW------RD
.: .:.:. .:: :: ..: . .. ...:.:: . :: : ..:.::: :
CCDS10 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 LKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFIL
:..:..::.::: ......:: :..:. .:: ::: : .:::::.::...:...::
CCDS10 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL
70 80 90 100 110 120
120 130 140 150
pF1KE6 DEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
.: ..:: : ::. .... :: . :..
CCDS10 QEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEIPRNINIG
130 140 150 160 170 180
>>CCDS83021.1 AP3S1 gene_id:1176|Hs108|chr5 (162 aa)
initn: 340 init1: 213 opt: 346 Z-score: 469.0 bits: 93.0 E(32554): 8.4e-20
Smith-Waterman score: 346; 38.2% identity (70.4% similar) in 152 aa overlap (1-146:2-152)
10 20 30 40 50
pF1KE6 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEW------RD
.. .:.:. .:: ::.:.: : :. ...: :: . : : ..:.::: :
CCDS83 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 LKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFIL
:..:..::.::: ......:: :..:. .:: ::: : .:::::.::. .:.. ::
CCDS83 NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL
70 80 90 100 110 120
120 130 140 150
pF1KE6 DEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
:...:: : ::. .... :. . : :..::
CCDS83 AEMVMGGMVLETNMNEIVTQIDAQNKL-EKSETFIFQSPRQDR
130 140 150 160
157 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 09:30:29 2016 done: Tue Nov 8 09:30:29 2016
Total Scan time: 1.250 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]