FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1460, 333 aa 1>>>pF1KE1460 333 - 333 aa - 333 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6201+/-0.000982; mu= 6.6054+/- 0.059 mean_var=158.5279+/-31.115, 0's: 0 Z-trim(110.2): 16 B-trim: 13 in 1/49 Lambda= 0.101864 statistics sampled from 11443 (11451) to 11443 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.352), width: 16 Scan time: 2.280 The best scores are: opt bits E(32554) CCDS13231.1 EIF2S2 gene_id:8894|Hs108|chr20 ( 333) 2199 334.8 6e-92 >>CCDS13231.1 EIF2S2 gene_id:8894|Hs108|chr20 (333 aa) initn: 2199 init1: 2199 opt: 2199 Z-score: 1764.3 bits: 334.8 E(32554): 6e-92 Smith-Waterman score: 2199; 99.7% identity (100.0% similar) in 333 aa overlap (1-333:1-333) 10 20 30 40 50 60 pF1KE1 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MSGDEMIFDPTMSKKKKKKKKPFMLDEEGDTQTEETQPSETKEVEPEPTEDKDLEADEED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TRKKDASDDLDDLNFFNQKKKKKKTKKIFDIDEAEEGVKDLKIESDVQEPTEPEDDLDIM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYDELL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: CCDS13 LGNKKKKKKNVKFPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSERDYTYEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQPKHLLAFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFTDICKLLHRQPKHLLAFL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLYFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLYFL 250 260 270 280 290 300 310 320 330 pF1KE1 QCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN ::::::::::::::::::::::::::::::::: CCDS13 QCETCHSRCSVASIKTGFQAVTGKRAQLRAKAN 310 320 330 333 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:58:50 2016 done: Mon Nov 7 02:58:51 2016 Total Scan time: 2.280 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]