FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2223, 338 aa 1>>>pF1KE2223 338 - 338 aa - 338 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3665+/-0.000673; mu= 15.8342+/- 0.041 mean_var=68.2090+/-13.551, 0's: 0 Z-trim(110.5): 24 B-trim: 0 in 0/50 Lambda= 0.155294 statistics sampled from 11679 (11690) to 11679 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.359), width: 16 Scan time: 2.650 The best scores are: opt bits E(32554) CCDS2830.1 HEMK1 gene_id:51409|Hs108|chr3 ( 338) 2316 527.4 6.2e-150 >>CCDS2830.1 HEMK1 gene_id:51409|Hs108|chr3 (338 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2805.2 bits: 527.4 E(32554): 6.2e-150 Smith-Waterman score: 2316; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338) 10 20 30 40 50 60 pF1KE2 MELWGRMLWALLSGPGRRGSTRGWAFSSWQPQPPLAGLSSAIELVSHWTGVFEKRGIPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MELWGRMLWALLSGPGRRGSTRGWAFSSWQPQPPLAGLSSAIELVSHWTGVFEKRGIPEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RESSEYIVAHVLGAKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEWDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 RESSEYIVAHVLGAKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEWDFQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 GLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSLLSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTHLPWGPMDLIVSNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 LPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTHLPWGPMDLIVSNP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 PYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDPRHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 PYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDPRHP 250 260 270 280 290 300 310 320 330 pF1KE2 ELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRRSGP :::::::::::::::::::::::::::::::::::::: CCDS28 ELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRRSGP 310 320 330 338 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:00:00 2016 done: Mon Nov 7 03:00:00 2016 Total Scan time: 2.650 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]