FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5119, 154 aa
  1>>>pF1KE5119 154 - 154 aa - 154 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3621+/-0.000754; mu= 10.7196+/- 0.045
 mean_var=52.0689+/-10.306, 0's: 0 Z-trim(107.2): 12  B-trim: 251 in 1/50
 Lambda= 0.177740
 statistics sampled from 9439 (9445) to 9439 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.29), width:  16
 Scan time:  1.740

The best scores are:                                      opt bits E(32554)
CCDS11099.1 EIF5A gene_id:1984|Hs108|chr17         ( 154) 1017 268.3 1.4e-72
CCDS45601.1 EIF5A gene_id:1984|Hs108|chr17         ( 184) 1017 268.3 1.6e-72
CCDS53546.1 EIF5AL1 gene_id:143244|Hs108|chr10     ( 154)  992 261.9 1.2e-70
CCDS3214.1 EIF5A2 gene_id:56648|Hs108|chr3         ( 153)  865 229.3 7.3e-61


>>CCDS11099.1 EIF5A gene_id:1984|Hs108|chr17              (154 aa)
 initn: 1017 init1: 1017 opt: 1017  Z-score: 1416.8  bits: 268.3 E(32554): 1.4e-72
Smith-Waterman score: 1017; 100.0% identity (100.0% similar) in 154 aa overlap (1-154:1-154)

               10        20        30        40        50        60
pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG
               70        80        90       100       110       120

              130       140       150    
pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
       ::::::::::::::::::::::::::::::::::
CCDS11 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
              130       140       150    

>>CCDS45601.1 EIF5A gene_id:1984|Hs108|chr17              (184 aa)
 initn: 1017 init1: 1017 opt: 1017  Z-score: 1415.4  bits: 268.3 E(32554): 1.6e-72
Smith-Waterman score: 1017; 100.0% identity (100.0% similar) in 154 aa overlap (1-154:31-184)

                                             10        20        30
pF1KE5                               MADDLDFETGDAGASATFPMQCSALRKNGF
                                     ::::::::::::::::::::::::::::::
CCDS45 MCGTGGTDSKTRRPPHRASFLKRLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGF
               10        20        30        40        50        60

               40        50        60        70        80        90
pF1KE5 VVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ
               70        80        90       100       110       120

              100       110       120       130       140       150
pF1KE5 LIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK
              130       140       150       160       170       180

           
pF1KE5 AMAK
       ::::
CCDS45 AMAK
           

>>CCDS53546.1 EIF5AL1 gene_id:143244|Hs108|chr10          (154 aa)
 initn: 992 init1: 992 opt: 992  Z-score: 1382.1  bits: 261.9 E(32554): 1.2e-70
Smith-Waterman score: 992; 98.1% identity (98.7% similar) in 154 aa overlap (1-154:1-154)

               10        20        30        40        50        60
pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
       ::::::::::::::::::::::::::::::::::: ::::::::.:::::::::::::::
CCDS53 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG
       :::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
CCDS53 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG
               70        80        90       100       110       120

              130       140       150    
pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
       ::::::::::::::::::::::::::::::::::
CCDS53 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
              130       140       150    

>>CCDS3214.1 EIF5A2 gene_id:56648|Hs108|chr3              (153 aa)
 initn: 865 init1: 865 opt: 865  Z-score: 1206.2  bits: 229.3 E(32554): 7.3e-61
Smith-Waterman score: 865; 84.0% identity (94.7% similar) in 150 aa overlap (1-150:1-150)

               10        20        30        40        50        60
pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
       :::..:: :::::::.:.::::::::::::::::::::::::::::::::::::::::::
CCDS32 MADEIDFTTGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG
       ::::::::::::::::::::::::::::.::: ::::::::: ..:::::::.::::.::
CCDS32 IDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICIQDGYLSLLTETGEVREDLKLPEGELG
               70        80        90       100       110       120

              130       140       150    
pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
       :::: ::. ::.. ..:. ::.:: :::::    
CCDS32 KEIEGKYNAGEDVQVSVMCAMSEEYAVAIKPCK 
              130       140       150    




154 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 21:35:31 2016 done: Mon Nov  7 21:35:32 2016
 Total Scan time:  1.740 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]