FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3924, 346 aa 1>>>pF1KE3924 346 - 346 aa - 346 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5592+/-0.000823; mu= 16.7152+/- 0.049 mean_var=138.2770+/-29.342, 0's: 0 Z-trim(111.6): 112 B-trim: 0 in 0/50 Lambda= 0.109068 statistics sampled from 12416 (12542) to 12416 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.385), width: 16 Scan time: 3.050 The best scores are: opt bits E(32554) CCDS41.1 PEX10 gene_id:5192|Hs108|chr1 ( 346) 2361 382.8 2.2e-106 CCDS44045.1 PEX10 gene_id:5192|Hs108|chr1 ( 326) 1346 223.1 2.5e-58 >>CCDS41.1 PEX10 gene_id:5192|Hs108|chr1 (346 aa) initn: 2361 init1: 2361 opt: 2361 Z-score: 2023.4 bits: 382.8 E(32554): 2.2e-106 Smith-Waterman score: 2361; 100.0% identity (100.0% similar) in 346 aa overlap (1-346:1-346) 10 20 30 40 50 60 pF1KE3 MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQELQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQELQAD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLRAVFVLRQGLACLQRLHVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLRAVFVLRQGLACLQRLHVA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 WFYIHGVFYHLAKRLTGITYQALRPDPLRVLMSVAPSALQLRVRSLPGEDLRARVSYRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 WFYIHGVFYHLAKRLTGITYQALRPDPLRVLMSVAPSALQLRVRSLPGEDLRARVSYRLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 GVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEER 250 260 270 280 290 300 310 320 330 340 pF1KE3 RHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR :::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR 310 320 330 340 >>CCDS44045.1 PEX10 gene_id:5192|Hs108|chr1 (326 aa) initn: 1341 init1: 1341 opt: 1346 Z-score: 1160.5 bits: 223.1 E(32554): 2.5e-58 Smith-Waterman score: 2183; 94.2% identity (94.2% similar) in 346 aa overlap (1-346:1-326) 10 20 30 40 50 60 pF1KE3 MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQELQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQELQAD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLRAVFVLRQGLACLQRLHVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLRAVFVLRQGLACLQRLHVA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 WFYIHGVFYHLAKRLTGITYQALRPDPLRVLMSVAPSALQLRVRSLPGEDLRARVSYRLL :::::::::::::::::::: :::::::::::::::::::: CCDS44 WFYIHGVFYHLAKRLTGITY--------------------LRVRSLPGEDLRARVSYRLL 190 200 210 220 250 260 270 280 290 300 pF1KE3 GVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEER 230 240 250 260 270 280 310 320 330 340 pF1KE3 RHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR :::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR 290 300 310 320 346 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:53:59 2016 done: Sun Nov 6 08:54:00 2016 Total Scan time: 3.050 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]