FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4417, 430 aa 1>>>pF1KE4417 430 - 430 aa - 430 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2689+/-0.000376; mu= 17.1311+/- 0.023 mean_var=65.2093+/-12.991, 0's: 0 Z-trim(112.7): 17 B-trim: 0 in 0/54 Lambda= 0.158825 statistics sampled from 21673 (21689) to 21673 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.254), width: 16 Scan time: 8.620 The best scores are: opt bits E(85289) NP_002071 (OMIM: 138150) aspartate aminotransferas ( 430) 2889 671.0 1.6e-192 NP_001273149 (OMIM: 138150) aspartate aminotransfe ( 387) 2070 483.3 4.5e-136 NP_002070 (OMIM: 138180,614419) aspartate aminotra ( 413) 1324 312.4 1.4e-84 >>NP_002071 (OMIM: 138150) aspartate aminotransferase, m (430 aa) initn: 2889 init1: 2889 opt: 2889 Z-score: 3577.5 bits: 671.0 E(85289): 1.6e-192 Smith-Waterman score: 2889; 99.8% identity (100.0% similar) in 430 aa overlap (1-430:1-430) 10 20 30 40 50 60 pF1KE4 MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 NLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 LKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 YYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 FFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 FFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 AKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 AKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 NLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 NLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGY 370 380 390 400 410 420 430 pF1KE4 LAHAIHQATK :::::::.:: NP_002 LAHAIHQVTK 430 >>NP_001273149 (OMIM: 138150) aspartate aminotransferase (387 aa) initn: 2068 init1: 2068 opt: 2070 Z-score: 2564.0 bits: 483.3 E(85289): 4.5e-136 Smith-Waterman score: 2526; 89.8% identity (90.0% similar) in 430 aa overlap (1-430:1-387) 10 20 30 40 50 60 pF1KE4 MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEV :::::::::::::::::::::: NP_001 NLGVGAYRDDNGKPYVLPSVRK-------------------------------------- 70 80 130 140 150 160 170 180 pF1KE4 LKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 -----FVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYR 90 100 110 120 130 190 200 210 220 230 240 pF1KE4 YYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFA 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE4 FFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADE 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE4 AKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVS 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE4 NLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGY 320 330 340 350 360 370 430 pF1KE4 LAHAIHQATK :::::::.:: NP_001 LAHAIHQVTK 380 >>NP_002070 (OMIM: 138180,614419) aspartate aminotransfe (413 aa) initn: 1298 init1: 919 opt: 1324 Z-score: 1639.7 bits: 312.4 E(85289): 1.4e-84 Smith-Waterman score: 1324; 48.8% identity (78.2% similar) in 404 aa overlap (31-428:5-408) 10 20 30 40 50 60 pF1KE4 MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM : ...: .. : .. .: :..: . .:. NP_002 MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKV 10 20 30 70 80 90 100 110 pF1KE4 NLGVGAYRDDNGKPYVLPSVRKAEAQIAAKN-LDKEYLPIGGLAEFCKASAELALGENSE :::::::: :. .:.::: :.:.: .:: : :..::::: ::::: . ...::::..: NP_002 NLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSP 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE4 VLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRD----VFLPKPTWGNHTPIFRDAGMQ .:: : ::...:::::::::.:: :... . . :.. .::: ::. .: ::.. NP_002 ALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFK 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE4 -LQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVK ...:::.: . :.:. : ..:. . :: :...::::::::::.:: :::::.::.:.: NP_002 DIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMK 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE4 KRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMV .: :: ::: ::::::::. ..::::.:.:. .:.. ::..::.:::.:::: .:.: NP_002 HRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVV 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE4 CKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGM :. . .: ::.. ..: .:::: .::::.:. :..:.: ..: .::.:::::. : NP_002 GKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTM 280 290 300 310 320 330 360 370 380 390 400 410 pF1KE4 RTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVT :..: . :. . .:.::::::::: ::::.:.::: :..: ::. .:::.:.:.: NP_002 RSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLT 340 350 360 370 380 390 420 430 pF1KE4 SSNVGYLAHAIHQATK ..:. :.: .::.: NP_002 TKNLDYVATSIHEAVTKIQ 400 410 430 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:43:25 2016 done: Sun Nov 6 00:43:26 2016 Total Scan time: 8.620 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]