FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1309, 357 aa 1>>>pF1KE1309 357 - 357 aa - 357 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.2392+/-0.00128; mu= -11.1639+/- 0.078 mean_var=483.7671+/-99.383, 0's: 0 Z-trim(113.9): 11 B-trim: 0 in 0/54 Lambda= 0.058312 statistics sampled from 14478 (14485) to 14478 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.734), E-opt: 0.2 (0.445), width: 16 Scan time: 2.600 The best scores are: opt bits E(32554) CCDS7785.1 EIF3F gene_id:8665|Hs108|chr11 ( 357) 2319 208.9 5.3e-54 >>CCDS7785.1 EIF3F gene_id:8665|Hs108|chr11 (357 aa) initn: 2319 init1: 2319 opt: 2319 Z-score: 1083.0 bits: 208.9 E(32554): 5.3e-54 Smith-Waterman score: 2319; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357) 10 20 30 40 50 60 pF1KE1 MATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 QTPASAQAPAQTPAPALPGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVIGTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 QTPASAQAPAQTPAPALPGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVIGTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 EHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 YYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 YYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSA 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 DNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 310 320 330 340 350 357 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:05:03 2016 done: Mon Nov 7 03:05:03 2016 Total Scan time: 2.600 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]