Result of FASTA (omim) for pFN21AB5337
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5337, 258 aa
  1>>>pF1KB5337 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6111+/-0.000279; mu= 15.0672+/- 0.017
 mean_var=105.4413+/-21.079, 0's: 0 Z-trim(121.5): 89  B-trim: 0 in 0/52
 Lambda= 0.124902
 statistics sampled from 38041 (38136) to 38041 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.447), width:  16
 Scan time:  6.630

The best scores are:                                      opt bits E(85289)
NP_001543 (OMIM: 146733) insulin-like growth facto ( 258) 1897 351.5 8.6e-97
NP_000587 (OMIM: 146730) insulin-like growth facto ( 259)  530 105.2 1.2e-22
NP_000590 (OMIM: 146734) insulin-like growth facto ( 272)  450 90.8 2.8e-18
NP_001013416 (OMIM: 146732) insulin-like growth fa ( 297)  415 84.5 2.3e-16
XP_016867641 (OMIM: 146732) PREDICTED: insulin-lik ( 291)  398 81.5 1.9e-15
NP_000589 (OMIM: 146732) insulin-like growth facto ( 291)  398 81.5 1.9e-15
NP_000588 (OMIM: 146731) insulin-like growth facto ( 328)  324 68.2 2.2e-11
NP_002169 (OMIM: 146735) insulin-like growth facto ( 240)  286 61.2   2e-09
XP_016874753 (OMIM: 146735) PREDICTED: insulin-lik ( 136)  277 59.3 4.1e-09
NP_001300922 (OMIM: 146731) insulin-like growth fa ( 159)  266 57.4 1.8e-08
NP_001300921 (OMIM: 146731) insulin-like growth fa ( 159)  266 57.4 1.8e-08
NP_001300919 (OMIM: 146731) insulin-like growth fa ( 181)  266 57.5   2e-08
NP_002766 (OMIM: 600142,602194,610149,616779) seri ( 480)  194 44.9 0.00032
NP_001129076 (OMIM: 601521) endothelial cell-speci ( 134)  183 42.4 0.00052
NP_031387 (OMIM: 605399) nidogen-2 precursor [Homo (1375)  196 45.7 0.00052
XP_005267462 (OMIM: 605399) PREDICTED: nidogen-2 i (1402)  196 45.7 0.00053
XP_016859749 (OMIM: 606189) PREDICTED: cysteine-ri ( 955)  190 44.5 0.00085
NP_008967 (OMIM: 601521) endothelial cell-specific ( 184)  179 41.8  0.0011
XP_005267464 (OMIM: 605399) PREDICTED: nidogen-2 i (1327)  185 43.7   0.002
XP_005267463 (OMIM: 605399) PREDICTED: nidogen-2 i (1354)  185 43.7   0.002
XP_016870188 (OMIM: 610413) PREDICTED: insulin-lik ( 174)  173 40.7  0.0022
NP_001007564 (OMIM: 610413) insulin-like growth fa ( 278)  173 40.9   0.003
NP_001240764 (OMIM: 602867,614224) insulin-like gr ( 279)  170 40.4  0.0044
NP_001544 (OMIM: 602867,614224) insulin-like growt ( 282)  170 40.4  0.0044


>>NP_001543 (OMIM: 146733) insulin-like growth factor-bi  (258 aa)
 initn: 1897 init1: 1897 opt: 1897  Z-score: 1858.7  bits: 351.5 E(85289): 8.6e-97
Smith-Waterman score: 1897; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)

               10        20        30        40        50        60
pF1KB5 MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPVGCEELVREPGCGCCATCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPVGCEELVREPGCGCCATCA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 LGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEIEAIQESLQPSDKDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEIEAIQESLQPSDKDE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GDHPNNSFSPCSAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDHPNNSFSPCSAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 ALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGG
              190       200       210       220       230       240

              250        
pF1KB5 LEPKGELDCHQLADSFRE
       ::::::::::::::::::
NP_001 LEPKGELDCHQLADSFRE
              250        

>>NP_000587 (OMIM: 146730) insulin-like growth factor-bi  (259 aa)
 initn: 537 init1: 240 opt: 530  Z-score: 527.4  bits: 105.2 E(85289): 1.2e-22
Smith-Waterman score: 530; 34.7% identity (60.1% similar) in 248 aa overlap (10-250:14-252)

                   10        20        30        40          50    
pF1KB5     MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPVG--CEELVREPGCG
                    :::..  : . :    .: ::: :::: : :::.  : :..:  :::
NP_000 MSEVPVARVWLVLLLLTVQVGVTAG-APWQCAPCSAEKLALC-PPVSASCSEVTRSAGCG
               10        20         30        40         50        

           60        70        80        90       100       110    
pF1KB5 CCATCALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEIEAIQESLQ
       ::  ::: ::  ::: : ::. :: :    : ..:::.: .:::.:.. ..  :      
NP_000 CCPMCALPLGAACGVATARCARGLSCRALPGEQQPLHALTRGQGACVQESDASA------
       60        70        80        90       100       110        

          120       130       140       150          160       170 
pF1KB5 PSDKDEGDHPNNSFSPCSAHDRRCLQKHFAKIRDRSTS---GGKMKVNGAPREDARPVPQ
       :   . :. :..  :   ....   . :.    ... :    .    .:.    .  . .
NP_000 PHAAEAGS-PESPESTEITEEELLDNFHLMAPSEEDHSILWDAISTYDGSKALHVTNIKK
            120        130       140       150       160       170 

               180       190       200       210       220         
pF1KB5 GS--CQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCV
        .  :. ::.:..: :: .:  . :..  . .:::..:: .: .::. ..::. : ::::
NP_000 WKEPCRIELYRVVESLAKAQETSGEEISKFYLPNCNKNGFYHSRQCETSMDGEAGLCWCV
             180       190       200       210       220       230 

     230       240       250        
pF1KB5 DRKTGVKLPGGLEPKGELDCHQLADSFRE
          .: ..::. : .:. .:.        
NP_000 YPWNGKRIPGSPEIRGDPNCQIYFNVQN 
             240       250          

>>NP_000590 (OMIM: 146734) insulin-like growth factor-bi  (272 aa)
 initn: 623 init1: 373 opt: 450  Z-score: 449.2  bits: 90.8 E(85289): 2.8e-18
Smith-Waterman score: 658; 40.0% identity (62.9% similar) in 275 aa overlap (1-255:1-269)

               10         20        30        40         50        
pF1KB5 MLPLCLVAALLLA-AGPGPSLGDEAIHCPPCSEEKLARCRP-PVGCEELVREPGCGCCAT
       :. :  :  :: : :::. :::.  .:: ::.:. :. : : :.::: ::.::::::: :
NP_000 MVLLTAVLLLLAAYAGPAQSLGSF-VHCEPCDEKALSMCPPSPLGCE-LVKEPGCGCCMT
               10        20         30        40         50        

       60        70        80        90       100           110    
pF1KB5 CALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELA----EIEAIQESLQ
       :::. :. ::::: ::..:::: : .  :::::.:.::.:::..      ...  ..: .
NP_000 CALAEGQSCGVYTERCAQGLRCLPRQDEEKPLHALLHGRGVCLNEKSYREQVKIERDSRE
       60        70        80        90       100       110        

          120       130          140       150       160           
pF1KB5 PSDKDEGDHPNNSFSPC---SAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARP---
         .   ..  ....::      : :    :  :  .::  .  . :  :. .. :.:   
NP_000 HEEPTTSEMAEETYSPKIFRPKHTRISELKAEAVKKDRRKKLTQSKFVGGAENTAHPRII
      120       130       140       150       160       170        

       170              180       190       200       210       220
pF1KB5 -VP-------QGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALD
        .:       :: :. ... .:..: ::   . . .:.   :::::.: .. :::.:.  
NP_000 SAPEMRQESEQGPCRRHMEASLQELKASPRMVPRAVYL---PNCDRKGFYKRKQCKPSRG
      180       190       200       210          220       230     

              230       240       250        
pF1KB5 GQRGKCWCVDRKTGVKLPGGLEPKGELDCHQLADSFRE
        .:: ::::: : :.::::     :...:: . .:   
NP_000 RKRGICWCVD-KYGMKLPGMEYVDGDFQCHTFDSSNVE
         240        250       260       270  

>>NP_001013416 (OMIM: 146732) insulin-like growth factor  (297 aa)
 initn: 498 init1: 359 opt: 415  Z-score: 414.6  bits: 84.5 E(85289): 2.3e-16
Smith-Waterman score: 550; 35.2% identity (57.8% similar) in 270 aa overlap (13-250:31-290)

                                 10        20        30        40  
pF1KB5                   MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPV
                                     .:: ::     ...: ::. . ::.: :: 
NP_001 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGP-----VVRCEPCDARALAQCAPPP
               10        20        30             40        50     

              50        60        70        80        90       100 
pF1KB5 G-CEELVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCM
       . : ::::::::::: ::::. :.:::.:: :::::::: :     .::..:. :.:.:.
NP_001 AVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCV
          60        70        80        90       100       110     

             110       120       130                     140       
pF1KB5 ELAEIEAIQESLQPSDKDEGDHPNNSFSPCSAHDR--------------RCLQKHF----
       . . .  ..  : :.    :. :  . .  : .::              :  . .:    
NP_001 NASAVSRLRAYLLPAPPAPGEPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLH
         120       130       140       150       160       170     

               150       160                170       180       190
pF1KB5 AKI----RDRSTSGGKMKVNGAPR---------EDARPVPQGSCQSELHRALERLAASQS
       .::    . .. .. ..::.   .         :. : .  : :. :.. .:..:   . 
NP_001 SKIIIIKKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNV
         180       190       200       210       220       230     

              200       210       220       230       240       250
pF1KB5 RTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGGLEPKGELDCH
        . . ..:   ::::..: .. :::.:.   .:: ::::: : :  :::    ::. : :
NP_001 LSPRGVHI---PNCDKKGFYKKKQCRPSKGRKRGFCWCVD-KYGQPLPG-YTTKGKEDVH
         240          250       260       270        280        290

               
pF1KB5 QLADSFRE
               
NP_001 CYSMQSK 
               

>>XP_016867641 (OMIM: 146732) PREDICTED: insulin-like gr  (291 aa)
 initn: 563 init1: 337 opt: 398  Z-score: 398.2  bits: 81.5 E(85289): 1.9e-15
Smith-Waterman score: 556; 35.6% identity (59.5% similar) in 264 aa overlap (13-250:31-284)

                                 10        20        30        40  
pF1KB5                   MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPV
                                     .:: ::     ...: ::. . ::.: :: 
XP_016 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGP-----VVRCEPCDARALAQCAPPP
               10        20        30             40        50     

              50        60        70        80        90       100 
pF1KB5 G-CEELVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCM
       . : ::::::::::: ::::. :.:::.:: :::::::: :     .::..:. :.:.:.
XP_016 AVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCV
          60        70        80        90       100       110     

             110               120       130       140             
pF1KB5 ELAEIEAIQESLQP--------SDKDEGDHPNNSFSPCSAHDRRCLQKHF----AKI---
       . . .  ..  : :        :...:    ..  ::  .  .:  . .:    .::   
XP_016 NASAVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIII
         120       130       140       150       160       170     

         150       160                170       180       190      
pF1KB5 -RDRSTSGGKMKVNGAPR---------EDARPVPQGSCQSELHRALERLAASQSRTHEDL
        . .. .. ..::.   .         :. : .  : :. :.. .:..:   .  . . .
XP_016 KKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGV
         180       190       200       210       220       230     

        200       210       220       230       240       250      
pF1KB5 YIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGGLEPKGELDCHQLADSF
       .:   ::::..: .. :::.:.   .:: ::::: : :  :::    ::. : :      
XP_016 HI---PNCDKKGFYKKKQCRPSKGRKRGFCWCVD-KYGQPLPG-YTTKGKEDVHCYSMQS
            240       250       260        270        280       290

         
pF1KB5 RE
         
XP_016 K 
         

>>NP_000589 (OMIM: 146732) insulin-like growth factor-bi  (291 aa)
 initn: 563 init1: 337 opt: 398  Z-score: 398.2  bits: 81.5 E(85289): 1.9e-15
Smith-Waterman score: 556; 35.6% identity (59.5% similar) in 264 aa overlap (13-250:31-284)

                                 10        20        30        40  
pF1KB5                   MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPV
                                     .:: ::     ...: ::. . ::.: :: 
NP_000 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGP-----VVRCEPCDARALAQCAPPP
               10        20        30             40        50     

              50        60        70        80        90       100 
pF1KB5 G-CEELVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCM
       . : ::::::::::: ::::. :.:::.:: :::::::: :     .::..:. :.:.:.
NP_000 AVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPDEARPLQALLDGRGLCV
          60        70        80        90       100       110     

             110               120       130       140             
pF1KB5 ELAEIEAIQESLQP--------SDKDEGDHPNNSFSPCSAHDRRCLQKHF----AKI---
       . . .  ..  : :        :...:    ..  ::  .  .:  . .:    .::   
NP_000 NASAVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSSTHRVSDPKFHPLHSKIIII
         120       130       140       150       160       170     

         150       160                170       180       190      
pF1KB5 -RDRSTSGGKMKVNGAPR---------EDARPVPQGSCQSELHRALERLAASQSRTHEDL
        . .. .. ..::.   .         :. : .  : :. :.. .:..:   .  . . .
NP_000 KKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYGPCRREMEDTLNHLKFLNVLSPRGV
         180       190       200       210       220       230     

        200       210       220       230       240       250      
pF1KB5 YIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGGLEPKGELDCHQLADSF
       .:   ::::..: .. :::.:.   .:: ::::: : :  :::    ::. : :      
NP_000 HI---PNCDKKGFYKKKQCRPSKGRKRGFCWCVD-KYGQPLPG-YTTKGKEDVHCYSMQS
            240       250       260        270        280       290

         
pF1KB5 RE
         
NP_000 K 
         

>>NP_000588 (OMIM: 146731) insulin-like growth factor-bi  (328 aa)
 initn: 648 init1: 307 opt: 324  Z-score: 325.5  bits: 68.2 E(85289): 2.2e-11
Smith-Waterman score: 628; 37.4% identity (60.3% similar) in 302 aa overlap (1-258:17-318)

                               10          20        30        40  
pF1KB5                 MLPLCLVAALLLAA--GPGPSLGDEAIHCPPCSEEKLARCRPP-
                       .:::  .  :::.:  : : . ..  ..::::. :.:: : :: 
NP_000 MLPRVGCPALPLPPPPLLPLLPLLLLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPP
               10        20        30        40        50        60

                             50        60        70        80      
pF1KB5 ---------------VGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPPRGV
                      . : :::::::::::..::   :  :::::::::.::::::  : 
NP_000 VAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPHPGS
               70        80        90       100       110       120

         90       100         110         120              130     
pF1KB5 EKPLHTLMHGQGVCMEL--AEIEAIQESLQPS--DKDEG-------DHPNNSFSPCSAHD
       : ::..:. :.:.: .   ::  :  :..  .  :..::       :   : ..  ..  
NP_000 ELPLQALVMGEGTCEKRRDAEYGASPEQVADNGDDHSEGGLVENHVDSTMNMLGGGGSAG
              130       140       150       160       170       180

         140          150              160       170        180    
pF1KB5 RRCLQ---KHFAKIRDRST-------SGGKMKVNGAPREDARPVPQGS-CQSELHRALER
       :. :.   :..: .:.. :       .::: ...    .  :: :  . ::.:: ..:::
NP_000 RKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLER
              190       200       210       220       230       240

              190       200       210       220       230       240
pF1KB5 LAA----SQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKLPGG
       ...    ..    : :: . :::::..: .. :::. .:.::::.::::. .::  . :.
NP_000 ISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGA
              250       260       270       280       290       300

              250                  
pF1KB5 LEPKGELDCHQLADSFRE          
          .:. .:: . .  .:          
NP_000 PTIRGDPECHLFYNEQQEARGVHTQRMQ
              310       320        

>>NP_002169 (OMIM: 146735) insulin-like growth factor-bi  (240 aa)
 initn: 400 init1: 185 opt: 286  Z-score: 290.2  bits: 61.2 E(85289): 2e-09
Smith-Waterman score: 460; 35.5% identity (59.0% similar) in 251 aa overlap (3-249:9-234)

                     10        20        30        40          50  
pF1KB5       MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPVGC--EELVREPG
               :: :. ::::::.:: .:.    .:: :..   : :  : ::  ::    :.
NP_002 MTPHRLLPPLLLLLALLLAASPGGALA----RCPGCGQGVQAGC--PGGCVEEEDGGSPA
               10        20            30        40          50    

               60        70        80        90       100       110
pF1KB5 CGCCAT--CALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEIEAIQ
        ::  .  :    :. :::::: :. ::.:.::.  : ::..:. :.: :.  :.  :. 
NP_002 EGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCLP-ARAPAVA
           60        70        80        90       100        110   

              120       130       140       150       160       170
pF1KB5 ESLQPSDKDEGDHPNNSFSPCSAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARPVP
       :  .:..    ..:. . .  .  .::  :      :. .::    . :.:  .:..   
NP_002 EE-NPKE----SKPQAGTARPQDVNRRDQQ------RNPGTSTTPSQPNSAGVQDTE---
                120       130             140       150            

              180       190       200       210       220       230
pF1KB5 QGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVD
       .: :. .:  .:..: .   :  . ::.   ::::. : .. .::. .   .:: :::::
NP_002 MGPCRRHLDSVLQQLQTEVYRGAQTLYV---PNCDHRGFYRKRQCRSSQGQRRGPCWCVD
     160       170       180          190       200       210      

              240       250        
pF1KB5 RKTGVKLPGGLEPKGELDCHQLADSFRE
       :  : .:::. . .:  .:         
NP_002 R-MGKSLPGSPDGNGSSSCPTGSSG   
         220       230       240   

>>XP_016874753 (OMIM: 146735) PREDICTED: insulin-like gr  (136 aa)
 initn: 240 init1: 185 opt: 277  Z-score: 284.5  bits: 59.3 E(85289): 4.1e-09
Smith-Waterman score: 277; 43.0% identity (61.4% similar) in 114 aa overlap (3-112:9-115)

                     10        20        30        40          50  
pF1KB5       MLPLCLVAALLLAAGPGPSLGDEAIHCPPCSEEKLARCRPPVGC--EELVREPG
               :: :. ::::::.:: .:.    .:: :..   : :  : ::  ::    :.
XP_016 MTPHRLLPPLLLLLALLLAASPGGALA----RCPGCGQGVQAGC--PGGCVEEEDGGSPA
               10        20            30        40          50    

               60        70        80        90       100       110
pF1KB5 CGCCAT--CALGLGMPCGVYTPRCGSGLRCYPPRGVEKPLHTLMHGQGVCMELAEIEAIQ
        ::  .  :    :. :::::: :. ::.:.::.  : ::..:. :.: :.  :.  :. 
XP_016 EGCAEAEGCLRREGQECGVYTPNCAPGLQCHPPKDDEAPLRALLLGRGRCLP-ARAPAVL
           60        70        80        90       100        110   

              120       130       140       150       160       170
pF1KB5 ESLQPSDKDEGDHPNNSFSPCSAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARPVP
        :                                                          
XP_016 SSPRTLRKLSPEPGATCSCRGES                                     
           120       130                                           

>>NP_001300922 (OMIM: 146731) insulin-like growth factor  (159 aa)
 initn: 275 init1: 216 opt: 266  Z-score: 272.9  bits: 57.4 E(85289): 1.8e-08
Smith-Waterman score: 266; 36.9% identity (65.8% similar) in 111 aa overlap (153-258:39-149)

            130       140       150       160       170        180 
pF1KB5 HPNNSFSPCSAHDRRCLQKHFAKIRDRSTSGGKMKVNGAPREDARPVPQGS-CQSELHRA
                                     ::: ...    .  :: :  . ::.:: ..
NP_001 SAGRKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQV
       10        20        30        40        50        60        

                 190       200       210       220       230       
pF1KB5 LERLAA----SQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRKTGVKL
       :::...    ..    : :: . :::::..: .. :::. .:.::::.::::. .::  .
NP_001 LERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLI
       70        80        90       100       110       120        

       240       250                  
pF1KB5 PGGLEPKGELDCHQLADSFRE          
        :.   .:. .:: . .  .:          
NP_001 QGAPTIRGDPECHLFYNEQQEARGVHTQRMQ
      130       140       150         




258 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 01:56:38 2016 done: Sat Nov  5 01:56:39 2016
 Total Scan time:  6.630 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com