Result of FASTA (omim) for
pFN21AB8604
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8604, 413 aa
1>>>pF1KB8604 413 - 413 aa - 413 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1436+/-0.000317; mu= 5.5801+/- 0.020
mean_var=188.2596+/-37.428, 0's: 0 Z-trim(122.5): 45 B-trim: 7 in 2/57
Lambda= 0.093475
statistics sampled from 40750 (40803) to 40750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.797), E-opt: 0.2 (0.478), width: 16
Scan time: 9.120
The best scores are: opt bits E(85289)
XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-pr ( 413) 2726 379.5 8.2e-105
NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans ( 413) 2726 379.5 8.2e-105
NP_001295302 (OMIM: 604840) peptidyl-prolyl cis-tr ( 412) 2709 377.2 4e-104
XP_011526166 (OMIM: 604840) PREDICTED: peptidyl-pr ( 383) 2249 315.2 1.8e-85
XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-pr ( 414) 313 54.1 7.5e-07
NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans ( 459) 313 54.2 8.1e-07
NP_004108 (OMIM: 602623,608516) peptidyl-prolyl ci ( 457) 273 48.8 3.4e-05
NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 273 48.8 3.4e-05
NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl ( 457) 273 48.8 3.4e-05
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 265 47.6 6.1e-05
XP_016868230 (OMIM: 604839) PREDICTED: inactive pe ( 317) 233 43.2 0.0011
NP_001128683 (OMIM: 604839) inactive peptidyl-prol ( 322) 228 42.6 0.0017
NP_003593 (OMIM: 604839) inactive peptidyl-prolyl ( 327) 228 42.6 0.0018
NP_001268233 (OMIM: 604839) inactive peptidyl-prol ( 297) 209 40.0 0.0096
>>XP_011526165 (OMIM: 604840) PREDICTED: peptidyl-prolyl (413 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2002.7 bits: 379.5 E(85289): 8.2e-105
Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413)
10 20 30 40 50 60
pF1KB8 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
370 380 390 400 410
>>NP_036313 (OMIM: 604840) peptidyl-prolyl cis-trans iso (413 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2002.7 bits: 379.5 E(85289): 8.2e-105
Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413)
10 20 30 40 50 60
pF1KB8 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
370 380 390 400 410
>>NP_001295302 (OMIM: 604840) peptidyl-prolyl cis-trans (412 aa)
initn: 1484 init1: 1484 opt: 2709 Z-score: 1990.3 bits: 377.2 E(85289): 4e-104
Smith-Waterman score: 2709; 99.8% identity (99.8% similar) in 413 aa overlap (1-413:1-412)
10 20 30 40 50 60
pF1KB8 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQG-RSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
190 200 210 220 230
250 260 270 280 290 300
pF1KB8 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
300 310 320 330 340 350
370 380 390 400 410
pF1KB8 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
360 370 380 390 400 410
>>XP_011526166 (OMIM: 604840) PREDICTED: peptidyl-prolyl (383 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 1655.5 bits: 315.2 E(85289): 1.8e-85
Smith-Waterman score: 2249; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KB8 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRST
:::::::::::::::::::::::::::::::::::::::::
XP_011 EHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKLPLPSADDPRRALKAGEEA
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 ETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
XP_011 CGAAEHGDRLVPENAGQPQPAAC
370 380
>>XP_011519231 (OMIM: 600611) PREDICTED: peptidyl-prolyl (414 aa)
initn: 367 init1: 165 opt: 313 Z-score: 244.0 bits: 54.1 E(85289): 7.5e-07
Smith-Waterman score: 313; 27.5% identity (60.7% similar) in 262 aa overlap (113-369:115-370)
90 100 110 120 130 140
pF1KB8 EPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPE
: ..: .: .: : :. .. .. .. :
XP_011 FEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD--KLFDQRE
90 100 110 120 130 140
150 160 170 180 190
pF1KB8 LVFTLGD---CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEV
: : .:. :. .:. .. :. :: ..: .: .: :... :::.: : :.
XP_011 LRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYEL
150 160 170 180 190 200
200 210 220 230 240 250
pF1KB8 TLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVD
::. . . ....:.. .. .: :....... . : .: : :.: . .
XP_011 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQY----KKIVSWLEYE
210 220 230 240 250
260 270 280 290 300 310
pF1KB8 MTF-EEEAQLLQ-LKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVL
.: .:::: : :.. ::: .:::. . ::..::. .:: . .: :.:::.:..
XP_011 SSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAH
260 270 280 290 300 310
320 330 340 350 360 370
pF1KB8 AQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPSRLPA
... : .. .:.: :.::. ...:. .. : . : :: .:.
XP_011 LAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEEN
320 330 340 350 360 370
380 390 400 410
pF1KB8 KCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
XP_011 KAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
380 390 400 410
>>NP_002005 (OMIM: 600611) peptidyl-prolyl cis-trans iso (459 aa)
initn: 391 init1: 165 opt: 313 Z-score: 243.4 bits: 54.2 E(85289): 8.1e-07
Smith-Waterman score: 313; 27.5% identity (60.7% similar) in 262 aa overlap (113-369:160-415)
90 100 110 120 130 140
pF1KB8 EPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPE
: ..: .: .: : :. .. .. .. :
NP_002 FEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKD--KLFDQRE
130 140 150 160 170 180
150 160 170 180 190
pF1KB8 LVFTLGD---CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEV
: : .:. :. .:. .. :. :: ..: .: .: :... :::.: : :.
NP_002 LRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYEL
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB8 TLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVD
::. . . ....:.. .. .: :....... . : .: : :.: . .
NP_002 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQY----KKIVSWLEYE
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB8 MTF-EEEAQLLQ-LKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVL
.: .:::: : :.. ::: .:::. . ::..::. .:: . .: :.:::.:..
NP_002 SSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAH
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB8 AQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPSRLPA
... : .. .:.: :.::. ...:. .. : . : :: .:.
NP_002 LAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEEN
370 380 390 400 410 420
380 390 400 410
pF1KB8 KCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
NP_002 KAKAEASSGDHPTDTEMKEEQKSNTAGSQSQVETEA
430 440 450
>>NP_004108 (OMIM: 602623,608516) peptidyl-prolyl cis-tr (457 aa)
initn: 218 init1: 133 opt: 273 Z-score: 214.3 bits: 48.8 E(85289): 3.4e-05
Smith-Waterman score: 273; 23.7% identity (55.7% similar) in 287 aa overlap (95-378:141-422)
70 80 90 100 110 120
pF1KB8 EAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVT
:.. .: . ..: : : : : .: .:
NP_004 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGE-GYSNPNEGATVE
120 130 140 150 160
130 140 150 160 170 180
pF1KB8 VHLQTSLENGTRVQEEPELVFTLG---DCDVIQALDLSVPLMDVGETAMVTADSKYCYGP
.::. . : :. . ...::.: : :. ..: .. :. : .. .: .:
NP_004 IHLEG--RCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGE
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB8 QGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLA
:. . : :.: : :::::. . . . .:.. : .: :..... . .. :
NP_004 AGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQA
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB8 ANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLE
. .: .. . . .. .: .. . . ::: ::: .: :.. :. .:
NP_004 VIQYGKIVSWLE--MEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB8 HQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTE
. : :.:.:.:.. ..:. : .. .:...:.::. . ..: :: . .
NP_004 LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD
350 360 370 380 390 400
370 380 390 400 410
pF1KB8 TALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
.: .:. . .. ::
NP_004 RRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
410 420 430 440 450
>>NP_001139247 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 218 init1: 133 opt: 273 Z-score: 214.3 bits: 48.8 E(85289): 3.4e-05
Smith-Waterman score: 273; 23.7% identity (55.7% similar) in 287 aa overlap (95-378:141-422)
70 80 90 100 110 120
pF1KB8 EAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVT
:.. .: . ..: : : : : .: .:
NP_001 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGE-GYSNPNEGATVE
120 130 140 150 160
130 140 150 160 170 180
pF1KB8 VHLQTSLENGTRVQEEPELVFTLG---DCDVIQALDLSVPLMDVGETAMVTADSKYCYGP
.::. . : :. . ...::.: : :. ..: .. :. : .. .: .:
NP_001 IHLEG--RCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGE
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB8 QGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLA
:. . : :.: : :::::. . . . .:.. : .: :..... . .. :
NP_001 AGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQA
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB8 ANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLE
. .: .. . . .. .: .. . . ::: ::: .: :.. :. .:
NP_001 VIQYGKIVSWLE--MEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB8 HQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTE
. : :.:.:.:.. ..:. : .. .:...:.::. . ..: :: . .
NP_001 LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD
350 360 370 380 390 400
370 380 390 400 410
pF1KB8 TALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
.: .:. . .. ::
NP_001 RRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
410 420 430 440 450
>>NP_001139248 (OMIM: 602623,608516) peptidyl-prolyl cis (457 aa)
initn: 218 init1: 133 opt: 273 Z-score: 214.3 bits: 48.8 E(85289): 3.4e-05
Smith-Waterman score: 273; 23.7% identity (55.7% similar) in 287 aa overlap (95-378:141-422)
70 80 90 100 110 120
pF1KB8 EAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVT
:.. .: . ..: : : : : .: .:
NP_001 YAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGE-GYSNPNEGATVE
120 130 140 150 160
130 140 150 160 170 180
pF1KB8 VHLQTSLENGTRVQEEPELVFTLG---DCDVIQALDLSVPLMDVGETAMVTADSKYCYGP
.::. . : :. . ...::.: : :. ..: .. :. : .. .: .:
NP_001 IHLEG--RCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGE
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB8 QGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLA
:. . : :.: : :::::. . . . .:.. : .: :..... . .. :
NP_001 AGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQA
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB8 ANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLE
. .: .. . . .. .: .. . . ::: ::: .: :.. :. .:
NP_001 VIQYGKIVSWLE--MEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB8 HQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTE
. : :.:.:.:.. ..:. : .. .:...:.::. . ..: :: . .
NP_001 LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD
350 360 370 380 390 400
370 380 390 400 410
pF1KB8 TALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
.: .:. . .. ::
NP_001 RRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV
410 420 430 440 450
>>NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans iso (370 aa)
initn: 257 init1: 193 opt: 265 Z-score: 209.7 bits: 47.6 E(85289): 6.1e-05
Smith-Waterman score: 273; 27.8% identity (56.4% similar) in 266 aa overlap (106-369:135-369)
80 90 100 110 120 130
pF1KB8 FLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVK-GQVVT-VHLQTSLEN
: :: : ... : :::. . . :::
NP_005 DENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILEN
110 120 130 140 150 160
140 150 160 170 180 190
pF1KB8 GTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHA
:.: . ....: .. : : : . :.. :. : .: :
NP_005 VEVKGEKPAKLCVIAECGELKEGD------DGG---IFPKDGS------GDSHPDFPEDA
170 180 190 200
200 210 220 230 240 250
pF1KB8 ALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAIT
.. :: :: ..: : . .. ::. .. .. .: ..: ... .
NP_005 ----DIDLKD-VD----KILLITEDL------KNIGNTFFKSQNWEMAIKKYAEVLRYVD
210 220 230 240 250
260 270 280 290 300 310
pF1KB8 SSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRK
:: : : ..:.: . ..:. :..: .::......:. :: .:: .:.: :::.:.
NP_005 SSKAVIET-ADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALELDPSNTKALYRR
260 270 280 290 300 310
320 330 340 350 360 370
pF1KB8 GKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPS
.. ::..:. :. : . : .:.:.::: :. .: ::.. : :.: ::.
NP_005 AQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMFA
320 330 340 350 360 370
380 390 400 410
pF1KB8 RLPAKCPGKGAWSIPWKWLFGATAVALGGVALSVVIAARN
413 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:35:39 2016 done: Sat Nov 5 01:35:41 2016
Total Scan time: 9.120 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]