FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3604, 354 aa 1>>>pF1KE3604 354 - 354 aa - 354 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9037+/-0.00038; mu= 0.3433+/- 0.024 mean_var=208.2249+/-43.562, 0's: 0 Z-trim(121.0): 36 B-trim: 1487 in 2/51 Lambda= 0.088881 statistics sampled from 36891 (36929) to 36891 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.433), width: 16 Scan time: 8.570 The best scores are: opt bits E(85289) XP_005268211 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 2154 288.6 2.4e-77 NP_001092872 (OMIM: 603544) cyclin-K [Homo sapiens ( 580) 2154 288.6 2.4e-77 XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 2154 288.6 2.4e-77 NP_001231 (OMIM: 143055) cyclin-T1 isoform a [Homo ( 726) 484 74.5 8.2e-13 NP_001232 (OMIM: 603862) cyclin-T2 isoform a [Homo ( 663) 449 70.0 1.7e-11 NP_490595 (OMIM: 603862) cyclin-T2 isoform b [Homo ( 730) 449 70.0 1.8e-11 NP_112199 (OMIM: 613482) cyclin-L2 isoform A [Homo ( 520) 394 62.9 1.9e-09 NP_001295114 (OMIM: 613384) cyclin-L1 isoform 2 [H ( 428) 392 62.6 1.9e-09 XP_006713773 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 493) 392 62.6 2.1e-09 NP_064703 (OMIM: 613384) cyclin-L1 isoform 1 [Homo ( 526) 392 62.6 2.2e-09 NP_001264771 (OMIM: 143055) cyclin-T1 isoform b [H ( 184) 375 60.1 4.4e-09 NP_689487 (OMIM: 300707,300708) cyclin-related pro ( 248) 343 56.1 9.7e-08 NP_001124469 (OMIM: 300707,300708) cyclin-related ( 228) 320 53.1 7e-07 XP_005277977 (OMIM: 300707,300708) PREDICTED: cycl ( 238) 307 51.5 2.3e-06 XP_005277978 (OMIM: 300707,300708) PREDICTED: cycl ( 218) 284 48.5 1.7e-05 XP_011529516 (OMIM: 300707,300708) PREDICTED: cycl ( 206) 271 46.8 5e-05 XP_011529517 (OMIM: 300707,300708) PREDICTED: cycl ( 206) 271 46.8 5e-05 XP_016860717 (OMIM: 603862) PREDICTED: cyclin-T2 i ( 642) 280 48.3 5.5e-05 XP_016860716 (OMIM: 603862) PREDICTED: cyclin-T2 i ( 709) 280 48.3 6e-05 NP_001034666 (OMIM: 613482) cyclin-L2 isoform B [H ( 226) 267 46.3 7.7e-05 XP_016875686 (OMIM: 143055) PREDICTED: cyclin-T1 i ( 646) 273 47.4 0.0001 XP_006715657 (OMIM: 123838) PREDICTED: cyclin-C is ( 282) 264 46.0 0.00012 NP_005181 (OMIM: 123838) cyclin-C isoform a [Homo ( 283) 264 46.0 0.00012 XP_011540518 (OMIM: 613482) PREDICTED: cyclin-L2 i ( 553) 234 42.4 0.0029 XP_011511313 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 371) 229 41.6 0.0033 XP_005247705 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 371) 229 41.6 0.0033 >>XP_005268211 (OMIM: 603544) PREDICTED: cyclin-K isofor (580 aa) initn: 2194 init1: 2141 opt: 2154 Z-score: 1509.8 bits: 288.6 E(85289): 2.4e-77 Smith-Waterman score: 2154; 93.8% identity (95.0% similar) in 337 aa overlap (1-336:1-331) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: XP_005 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 QPQQKDPLILLQGWACRQPATH-LLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG ::::::: : .::: . ::: .: :: XP_005 QPQQKDPQ---QPAQQQQPAQQPKKPSPQPSS---PRQVKRAVVVSPKEENKAAEPPPPK 310 320 330 340 350 XP_005 IPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPP 360 370 380 390 400 410 >>NP_001092872 (OMIM: 603544) cyclin-K [Homo sapiens] (580 aa) initn: 2194 init1: 2141 opt: 2154 Z-score: 1509.8 bits: 288.6 E(85289): 2.4e-77 Smith-Waterman score: 2154; 93.8% identity (95.0% similar) in 337 aa overlap (1-336:1-331) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: NP_001 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 QPQQKDPLILLQGWACRQPATH-LLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG ::::::: : .::: . ::: .: :: NP_001 QPQQKDPQ---QPAQQQQPAQQPKKPSPQPSS---PRQVKRAVVVSPKEENKAAEPPPPK 310 320 330 340 350 NP_001 IPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPP 360 370 380 390 400 410 >>XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K isofor (580 aa) initn: 2194 init1: 2141 opt: 2154 Z-score: 1509.8 bits: 288.6 E(85289): 2.4e-77 Smith-Waterman score: 2154; 93.8% identity (95.0% similar) in 337 aa overlap (1-336:1-331) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: XP_011 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPS 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 QPQQKDPLILLQGWACRQPATH-LLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG ::::::: : .::: . ::: .: :: XP_011 QPQQKDPQ---QPAQQQQPAQQPKKPSPQPSS---PRQVKRAVVVSPKEENKAAEPPPPK 310 320 330 340 350 XP_011 IPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPP 360 370 380 390 400 410 >>NP_001231 (OMIM: 143055) cyclin-T1 isoform a [Homo sap (726 aa) initn: 483 init1: 301 opt: 484 Z-score: 351.1 bits: 74.5 E(85289): 8.2e-13 Smith-Waterman score: 485; 32.7% identity (66.5% similar) in 260 aa overlap (24-275:12-254) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV ::. ...: ..::. :.:: : ::...: .. :. NP_001 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDM 10 20 30 40 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA : ::.. :. :.:.:.:::::..:: ::: .. ::::.:.:: ::: . .::.: NP_001 GQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVA 50 60 70 80 90 100 130 140 150 160 170 pF1KE3 RSLLNDVQFGQFGDDPKE-------EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKG .. :. . .. : .: ....:: :.:::. :.: ..::. ..: .. ... NP_001 HTCLHPQE--SLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRA 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 DKNKIQKLVQMAWTFVNDSL-CTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYR .:. :.: .. ....:: ::.:::. : ..: . ..:: ::. : . . NP_001 SKD----LAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLA---CKWSNWEIPVSTDGK 170 180 190 200 210 240 250 260 270 280 290 pF1KE3 RWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQ .::: : ...:... :..: :. ..::..:.. NP_001 HWWEYVDATVTLELLDELTHEFL--------QILEKTPNRLKRIWNWRACEAAKKTKADD 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE3 PSQSSEPSQPQQKDPLILLQGWACRQPATHLLPSPLEDSLLCPRPFPHPACLQLGGWGGQ NP_001 RGTDEKTSEQTILNMISQSSSDTTIAGLMSMSTSTTSAVPSLPVSEESSSNLTSVEMLPG 280 290 300 310 320 330 >>NP_001232 (OMIM: 603862) cyclin-T2 isoform a [Homo sap (663 aa) initn: 410 init1: 260 opt: 449 Z-score: 327.4 bits: 70.0 E(85289): 1.7e-11 Smith-Waterman score: 449; 28.2% identity (63.0% similar) in 319 aa overlap (24-328:11-313) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV :.. ...: .:::. :.. : :...: .: .. NP_001 MASGRGASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEM 10 20 30 40 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA : ::.. :. :.:.:.::::: ::: .: . . .. ::::.:.:: .: . .::.: NP_001 GQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVA 50 60 70 80 90 100 130 140 150 160 170 pF1KE3 RSLLN------DVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGD .. :. :.. . .. .: ...:: :.:::. :.. .:::. ..: .. .... NP_001 HACLHPLEPLLDTKCDAYLQQTQE-LVILETIMLQTLGFEITIEHPHTDVVKCTQLVRAS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 KNKIQKLVQMAWTFVNDSL-CTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRR :. :.: .. ....:: ::. ::..: .:: . ..:: ::. : . .. NP_001 KD----LAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLA---CKWSNWEIPVSTDGKH 170 180 190 200 210 240 250 260 270 280 pF1KE3 WWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPT-----PQVP-Q ::: : ...:... :..: :. ..::..:.. . . . :.: : NP_001 WWEYVDPTVTLELLDELTHEFL--------QILEKTPNRLKKIRNWRANQAARKPKVDGQ 220 230 240 250 260 270 290 300 310 320 330 340 pF1KE3 VQQSQPSQSSEPSQPQQKDPLILLQ-GWACRQPATHLLPSPLEDSLLCPRPFPHPACLQL :... :: .. : . . . . ..:.: .:.:. NP_001 VSETPLLGSSLVQNSILVDSVTGVPTNPSFQKPSTSAFPAPVPLNSGNISVQDSHTSDNL 280 290 300 310 320 330 350 pF1KE3 GGWGGQPG NP_001 SMLATGMPSTSYGLSSHQEWPQHQDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHS 340 350 360 370 380 390 >>NP_490595 (OMIM: 603862) cyclin-T2 isoform b [Homo sap (730 aa) initn: 410 init1: 260 opt: 449 Z-score: 326.8 bits: 70.0 E(85289): 1.8e-11 Smith-Waterman score: 449; 28.2% identity (63.0% similar) in 319 aa overlap (24-328:11-313) 10 20 30 40 50 60 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDV :.. ...: .:::. :.. : :...: .: .. NP_490 MASGRGASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEM 10 20 30 40 70 80 90 100 110 120 pF1KE3 GTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKIEETPKKCKDIIKTA : ::.. :. :.:.:.::::: ::: .: . . .. ::::.:.:: .: . .::.: NP_490 GQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVA 50 60 70 80 90 100 130 140 150 160 170 pF1KE3 RSLLN------DVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGD .. :. :.. . .. .: ...:: :.:::. :.. .:::. ..: .. .... NP_490 HACLHPLEPLLDTKCDAYLQQTQE-LVILETIMLQTLGFEITIEHPHTDVVKCTQLVRAS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 KNKIQKLVQMAWTFVNDSL-CTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRR :. :.: .. ....:: ::. ::..: .:: . ..:: ::. : . .. NP_490 KD----LAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLA---CKWSNWEIPVSTDGKH 170 180 190 200 210 240 250 260 270 280 pF1KE3 WWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPT-----PQVP-Q ::: : ...:... :..: :. ..::..:.. . . . :.: : NP_490 WWEYVDPTVTLELLDELTHEFL--------QILEKTPNRLKKIRNWRANQAARKPKVDGQ 220 230 240 250 260 270 290 300 310 320 330 340 pF1KE3 VQQSQPSQSSEPSQPQQKDPLILLQ-GWACRQPATHLLPSPLEDSLLCPRPFPHPACLQL :... :: .. : . . . . ..:.: .:.:. NP_490 VSETPLLGSSLVQNSILVDSVTGVPTNPSFQKPSTSAFPAPVPLNSGNISVQDSHTSDNL 280 290 300 310 320 330 350 pF1KE3 GGWGGQPG NP_490 SMLATGMPSTSYGLSSHQEWPQHQDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHS 340 350 360 370 380 390 >>NP_112199 (OMIM: 613482) cyclin-L2 isoform A [Homo sap (520 aa) initn: 371 init1: 184 opt: 394 Z-score: 290.7 bits: 62.9 E(85289): 1.9e-09 Smith-Waterman score: 400; 29.5% identity (59.1% similar) in 325 aa overlap (23-338:52-350) 10 20 30 40 50 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRRE : : : : :::. ::: ::. : NP_112 APGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDK-LRFTPSMSSGLDTDTETDLRVV 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE3 GARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSF-KQFPRYVTGACCLFLAGKIEETPK : ..: .: : : ..::: . :.::.. .:: :. ..:. :: . ::.::::.:. NP_112 GCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMAC-VHLASKIEEAPR 90 100 110 120 130 120 130 140 150 160 pF1KE3 KCKDIIKTARSL--LNDVQ------FGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQF . .:.:.. . : : : . . : . :.... :: .:. . : ..:.::... NP_112 RIRDVINVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKI 140 150 160 170 180 190 170 180 190 200 210 220 pF1KE3 LLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQ .. : . :. ..: :.::: .:...:::: : . ....:: :: : .:::.: .. . NP_112 IVMYLQVLECERN--QHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPL- 200 210 220 230 240 250 230 240 250 260 270 280 pF1KE3 EWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTP : .:. : . . ...:: .::.::.. : .. : . .. ... NP_112 -----PNRPHWFLLF--GATEEEIQEICLKILQLYARKKVDLTHLEGEVEKRKHAIE--- 260 270 280 290 300 290 300 310 320 330 340 pF1KE3 QVPQVQQSQPSQSSEPSQPQQKDPLILLQGWACRQPATHLLPSPLEDSLLCPRPFPHPAC . . ... :. : .:.: . .:: .:. :: : . : :. NP_112 -----EAKAQARGLLPGGTQ------VLDGTSGFSPAPKLVESPKEGKGSKPSPLSVKNT 310 320 330 340 350 350 pF1KE3 LQLGGWGGQPG NP_112 KRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQSYSRSPSRSASPKRRKSDSGSTSGGS 360 370 380 390 400 410 >>NP_001295114 (OMIM: 613384) cyclin-L1 isoform 2 [Homo (428 aa) initn: 399 init1: 197 opt: 392 Z-score: 290.6 bits: 62.6 E(85289): 1.9e-09 Smith-Waterman score: 395; 29.0% identity (60.2% similar) in 314 aa overlap (11-304:48-345) 10 20 30 40 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEG : .: ..::. .. :. :::. .: NP_001 AAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHS----LIPEERLSPTPSMQDG 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE3 LDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCL :: .:. : : ..: .: : : ..::: . ::::.. .:: . ... :. NP_001 LDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACI 80 90 100 110 120 130 110 120 130 140 150 pF1KE3 FLAGKIEETPKKCKDIIKTARSLL--------NDVQFGQFGDDPKEEVMVLERILLQTIK ::.::::.:.. .:.:.. . : . . . : . :..:. :: .:. . NP_001 NLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELG 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE3 FDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMY : ..:.::..... : . :. ..: : ::: ::...:::: :.. ....:: :: : .: NP_001 FCVHVKHPHKIIVMYLQVLECERN--QTLVQTAWNYMNDSLRTNVFVRFQPETIACACIY 200 210 220 230 240 250 220 230 240 250 260 pF1KE3 LAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGK---QQMPHHT ::.: .. . : .:. : . . ...:: . : ::.. : . . ... NP_001 LAARALQIPL------PTRPHWFLLF--GTTEEEIQEICIETLRLYTRKKPNYELLEKEV 260 270 280 290 300 270 280 290 300 310 320 pF1KE3 PHQ---LQQPP----SLQP--TPQVPQVQQSQPSQSSEPSQPQQKDPLILLQGWACRQPA .. ::. .:.: :: . . .:. :.::.:.. NP_001 EKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPA--SKPSSPREVKAEEKSPISINVKTV 310 320 330 340 350 360 330 340 350 pF1KE3 THLLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG NP_001 KKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRQDEVLLRCPGR 370 380 390 400 410 420 >>XP_006713773 (OMIM: 613384) PREDICTED: cyclin-L1 isofo (493 aa) initn: 399 init1: 197 opt: 392 Z-score: 289.7 bits: 62.6 E(85289): 2.1e-09 Smith-Waterman score: 395; 29.0% identity (60.2% similar) in 314 aa overlap (11-304:48-345) 10 20 30 40 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEG : .: ..::. .. :. :::. .: XP_006 AAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHS----LIPEERLSPTPSMQDG 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE3 LDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCL :: .:. : : ..: .: : : ..::: . ::::.. .:: . ... :. XP_006 LDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACI 80 90 100 110 120 130 110 120 130 140 150 pF1KE3 FLAGKIEETPKKCKDIIKTARSLL--------NDVQFGQFGDDPKEEVMVLERILLQTIK ::.::::.:.. .:.:.. . : . . . : . :..:. :: .:. . XP_006 NLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELG 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE3 FDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMY : ..:.::..... : . :. ..: : ::: ::...:::: :.. ....:: :: : .: XP_006 FCVHVKHPHKIIVMYLQVLECERN--QTLVQTAWNYMNDSLRTNVFVRFQPETIACACIY 200 210 220 230 240 250 220 230 240 250 260 pF1KE3 LAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGK---QQMPHHT ::.: .. . : .:. : . . ...:: . : ::.. : . . ... XP_006 LAARALQIPL------PTRPHWFLLF--GTTEEEIQEICIETLRLYTRKKPNYELLEKEV 260 270 280 290 300 270 280 290 300 310 320 pF1KE3 PHQ---LQQPP----SLQP--TPQVPQVQQSQPSQSSEPSQPQQKDPLILLQGWACRQPA .. ::. .:.: :: . . .:. :.::.:.. XP_006 EKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPA--SKPSSPREVKAEEKSPISINVKTV 310 320 330 340 350 360 330 340 350 pF1KE3 THLLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG XP_006 KKEPEDRQQASKSPYNGYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTR 370 380 390 400 410 420 >>NP_064703 (OMIM: 613384) cyclin-L1 isoform 1 [Homo sap (526 aa) initn: 399 init1: 197 opt: 392 Z-score: 289.3 bits: 62.6 E(85289): 2.2e-09 Smith-Waterman score: 395; 29.0% identity (60.2% similar) in 314 aa overlap (11-304:48-345) 10 20 30 40 pF1KE3 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEG : .: ..::. .. :. :::. .: NP_064 AAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHS----LIPEERLSPTPSMQDG 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE3 LDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCL :: .:. : : ..: .: : : ..::: . ::::.. .:: . ... :. NP_064 LDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACI 80 90 100 110 120 130 110 120 130 140 150 pF1KE3 FLAGKIEETPKKCKDIIKTARSLL--------NDVQFGQFGDDPKEEVMVLERILLQTIK ::.::::.:.. .:.:.. . : . . . : . :..:. :: .:. . NP_064 NLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELG 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE3 FDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMY : ..:.::..... : . :. ..: : ::: ::...:::: :.. ....:: :: : .: NP_064 FCVHVKHPHKIIVMYLQVLECERN--QTLVQTAWNYMNDSLRTNVFVRFQPETIACACIY 200 210 220 230 240 250 220 230 240 250 260 pF1KE3 LAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGK---QQMPHHT ::.: .. . : .:. : . . ...:: . : ::.. : . . ... NP_064 LAARALQIPL------PTRPHWFLLF--GTTEEEIQEICIETLRLYTRKKPNYELLEKEV 260 270 280 290 300 270 280 290 300 310 320 pF1KE3 PHQ---LQQPP----SLQP--TPQVPQVQQSQPSQSSEPSQPQQKDPLILLQGWACRQPA .. ::. .:.: :: . . .:. :.::.:.. NP_064 EKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPA--SKPSSPREVKAEEKSPISINVKTV 310 320 330 340 350 360 330 340 350 pF1KE3 THLLPSPLEDSLLCPRPFPHPACLQLGGWGGQPG NP_064 KKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGT 370 380 390 400 410 420 354 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:18:53 2016 done: Mon Nov 7 03:18:54 2016 Total Scan time: 8.570 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]