FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3124, 313 aa 1>>>pF1KE3124 313 - 313 aa - 313 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5559+/-0.000822; mu= 14.0839+/- 0.049 mean_var=62.8783+/-12.674, 0's: 0 Z-trim(106.6): 34 B-trim: 0 in 0/49 Lambda= 0.161742 statistics sampled from 9038 (9070) to 9038 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.279), width: 16 Scan time: 2.200 The best scores are: opt bits E(32554) CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 ( 313) 2047 486.2 1.4e-137 CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 ( 316) 1452 347.3 8.9e-96 CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 ( 329) 1418 339.4 2.3e-93 CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 ( 260) 266 70.6 1.5e-12 CCDS55117.1 KCTD7 gene_id:154881|Hs108|chr7 ( 288) 266 70.6 1.7e-12 CCDS5534.1 KCTD7 gene_id:154881|Hs108|chr7 ( 289) 266 70.6 1.7e-12 CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 ( 259) 246 65.9 3.8e-11 >>CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 (313 aa) initn: 2047 init1: 2047 opt: 2047 Z-score: 2583.4 bits: 486.2 E(32554): 1.4e-137 Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 VEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 NMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 NMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 KVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRRI 250 260 270 280 290 300 310 pF1KE3 HIKRPDDRAHLHQ ::::::::::::: CCDS91 HIKRPDDRAHLHQ 310 >>CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 (316 aa) initn: 880 init1: 780 opt: 1452 Z-score: 1833.0 bits: 347.3 E(32554): 8.9e-96 Smith-Waterman score: 1452; 70.7% identity (88.2% similar) in 314 aa overlap (4-313:1-311) 10 20 30 40 50 60 pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM :::.. . : .: . ..::: . ..:::.:::::.:::::...::..::::::: CCDS11 MSGDTCLCPA-SGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRHDTMLKAM 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL ::::::::::.:::::::::::::::::::::: .. ::..:.::.::.:::::::.::: CCDS11 FSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGL 60 70 80 90 100 110 130 140 150 160 170 pF1KE3 VEECQAALQNK-DTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSD :. ::.:::.: :.:.: :..:.::: :::..:: .:.::.::::::::::::::::::: CCDS11 VNMCQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSD 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 DNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQ :..::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: CCDS11 DHLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQ 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 TKVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRR ::::::::::::::::.::::. : :::.:::::. . ... ...: : .:::: CCDS11 TKVEFPEARIYEETLNVLLYETP--RVPDNSLLEATSRSRSQASPSEDEETFELRDRVRR 240 250 260 270 280 290 300 310 pF1KE3 IHIKRP---DDRAHLHQ ::.:: ::: :: CCDS11 IHVKRYSTYDDRQLGHQSTHRD 300 310 >>CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 (329 aa) initn: 898 init1: 763 opt: 1418 Z-score: 1789.8 bits: 339.4 E(32554): 2.3e-93 Smith-Waterman score: 1418; 72.4% identity (89.8% similar) in 294 aa overlap (24-313:33-324) 10 20 30 40 50 pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQ .: .:.::::::::::.:.:::..::: : CCDS10 AEASGPAAAAAPSLEAPKPSGLEPGPAAYGLKPLTPNSKYVKLNVGGSLHYTTLRTLTGQ 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 DTMLKAMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAK :::::::::::.:::::. ::.:::: :.::::::::::::.:::::: ::. :::.::. CCDS10 DTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGEAR 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 YYLVQGLVEECQAALQNK-DTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKY :::::::.:.:: :::.: .: :.: .:..:: .:::.:.:...::.::::.::::::: CCDS10 YYLVQGLIEDCQLALQQKRETLSPLCLIPMVTSPREEQQLLASTSKPVVKLLHNRSNNKY 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 SYTSNSDDNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIV ::::.::::.::::::::::.:::.::.::.:::.::::::::::::::::::::::::: CCDS10 SYTSTSDDNLLKNIELFDKLALRFHGRLLFLKDVLGDEICCWSFYGQGRKIAEVCCTSIV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 YATEKKQTKVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERE :::::::::::::::::.:::::::.::. :::: ::::::::::: . ..:.. CCDS10 YATEKKQTKVEFPEARIFEETLNILIYETP--RGPDPALLEATGGAAGAGGAGRGEDEEN 250 260 270 280 290 300 300 310 pF1KE3 RIERVRRIHIKRP---DDRAHLHQ : .::::::..: :.: : .: CCDS10 REHRVRRIHVRRHITHDERPHGQQIVFKD 310 320 >>CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 (260 aa) initn: 278 init1: 195 opt: 266 Z-score: 338.7 bits: 70.6 E(32554): 1.5e-12 Smith-Waterman score: 278; 37.7% identity (61.1% similar) in 175 aa overlap (31-202:2-164) 10 20 30 40 50 pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTK-QDTMLKA : . ::::: :: :.. :::. :.:: : CCDS31 MSDPITLNVGGKLYTTSLATLTSFPDSMLGA 10 20 30 60 70 80 90 100 110 pF1KE3 MFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQG ::::.: . ::.: .::: :: : :::.:: . . :::. .:. : :: .: :: CCDS31 MFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQP 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 LVEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNK--PAVKLLYNRSNNKYSYTSN :.: :::.:.. ....... : : :. .:.. .. . :: .:. CCDS31 LIE----ALQEKEVE--------LSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSS 100 110 120 130 180 190 200 210 220 230 pF1KE3 SDDNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEK : . . :: . : :.. : :: CCDS31 SMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEE 140 150 160 170 180 190 >>CCDS55117.1 KCTD7 gene_id:154881|Hs108|chr7 (288 aa) initn: 264 init1: 194 opt: 266 Z-score: 338.0 bits: 70.6 E(32554): 1.7e-12 Smith-Waterman score: 266; 44.9% identity (68.2% similar) in 107 aa overlap (34-137:53-156) 10 20 30 40 50 60 pF1KE3 MSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLT-KQDTMLKAMFS : ::.::: . : ..:: .:::: :::: CCDS55 AEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFS 30 40 50 60 70 80 70 80 90 100 110 120 pF1KE3 GRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVE :: . ::::: .::: : ::: .::.::.: .: : :.... . ::.:: . :.: CCDS55 GRHYIPTDSEGRYFIDRDGTHFGDVLNFLRSGDLP-P--RERVRAVYKEAQYYAIGPLLE 90 100 110 120 130 130 140 150 160 170 180 pF1KE3 --ECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD : . :... . . : CCDS55 QLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEMPI 140 150 160 170 180 190 >>CCDS5534.1 KCTD7 gene_id:154881|Hs108|chr7 (289 aa) initn: 264 init1: 194 opt: 266 Z-score: 338.0 bits: 70.6 E(32554): 1.7e-12 Smith-Waterman score: 266; 44.9% identity (68.2% similar) in 107 aa overlap (34-137:53-156) 10 20 30 40 50 60 pF1KE3 MSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLT-KQDTMLKAMFS : ::.::: . : ..:: .:::: :::: CCDS55 AEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFS 30 40 50 60 70 80 70 80 90 100 110 120 pF1KE3 GRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVE :: . ::::: .::: : ::: .::.::.: .: : :.... . ::.:: . :.: CCDS55 GRHYIPTDSEGRYFIDRDGTHFGDVLNFLRSGDLP-P--RERVRAVYKEAQYYAIGPLLE 90 100 110 120 130 130 140 150 160 170 180 pF1KE3 --ECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD : . :... . . : CCDS55 QLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEMPI 140 150 160 170 180 190 >>CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 (259 aa) initn: 244 init1: 176 opt: 246 Z-score: 313.5 bits: 65.9 E(32554): 3.8e-11 Smith-Waterman score: 246; 39.8% identity (66.4% similar) in 113 aa overlap (25-136:26-137) 10 20 30 40 50 pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQ-DTMLK .: . .: . ::::: :: : ::::: ::.:. CCDS93 MERKINRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 AMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQ .. .:.. :..: .::: : : .::.::.: . :::. :: . : ::... .. CCDS93 GIVNGKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLK 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 GLVEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNS ::.:: .. . :. : CCDS93 GLAEEVKSRWE-KEQLTPRETTFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSKSR 130 140 150 160 170 313 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:22:28 2016 done: Mon Nov 7 03:22:29 2016 Total Scan time: 2.200 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]