FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3106, 276 aa 1>>>pF1KE3106 276 - 276 aa - 276 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.0956+/-0.000804; mu= -3.4021+/- 0.049 mean_var=319.2664+/-64.779, 0's: 0 Z-trim(118.7): 2 B-trim: 0 in 0/54 Lambda= 0.071779 statistics sampled from 19697 (19699) to 19697 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.847), E-opt: 0.2 (0.605), width: 16 Scan time: 3.300 The best scores are: opt bits E(32554) CCDS59410.1 AKT1S1 gene_id:84335|Hs108|chr19 ( 276) 1892 208.2 5.3e-54 CCDS12784.1 AKT1S1 gene_id:84335|Hs108|chr19 ( 256) 1759 194.4 7.1e-50 >>CCDS59410.1 AKT1S1 gene_id:84335|Hs108|chr19 (276 aa) initn: 1892 init1: 1892 opt: 1892 Z-score: 1082.9 bits: 208.2 E(32554): 5.3e-54 Smith-Waterman score: 1892; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276) 10 20 30 40 50 60 pF1KE3 MSFEGGDGAGPAMLATGTARMASGRPEELWEAVVGAAERFRARTGTELVLLTAAPPPPPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MSFEGGDGAGPAMLATGTARMASGRPEELWEAVVGAAERFRARTGTELVLLTAAPPPPPR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PGPCAYAAHGRGALAEAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPSPPRPTLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 PGPCAYAAHGRGALAEAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPSPPRPTLAR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 EDNEEDEDEPTETETSGEQLGISDNGGLFVMDEDATLQDLPPFCESDPESTDDGSLSEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 EDNEEDEDEPTETETSGEQLGISDNGGLFVMDEDATLQDLPPFCESDPESTDDGSLSEET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PAGPPTCSVPPASALPTQQYAKSLPVSVPVWGFKEKRTEARSSDEENGPPSSPDLDRIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 PAGPPTCSVPPASALPTQQYAKSLPVSVPVWGFKEKRTEARSSDEENGPPSSPDLDRIAA 190 200 210 220 230 240 250 260 270 pF1KE3 SMRALVLREAEDTQVFGDLPRPRLNTSDFQKLKRKY :::::::::::::::::::::::::::::::::::: CCDS59 SMRALVLREAEDTQVFGDLPRPRLNTSDFQKLKRKY 250 260 270 >>CCDS12784.1 AKT1S1 gene_id:84335|Hs108|chr19 (256 aa) initn: 1759 init1: 1759 opt: 1759 Z-score: 1008.9 bits: 194.4 E(32554): 7.1e-50 Smith-Waterman score: 1759; 100.0% identity (100.0% similar) in 256 aa overlap (21-276:1-256) 10 20 30 40 50 60 pF1KE3 MSFEGGDGAGPAMLATGTARMASGRPEELWEAVVGAAERFRARTGTELVLLTAAPPPPPR :::::::::::::::::::::::::::::::::::::::: CCDS12 MASGRPEELWEAVVGAAERFRARTGTELVLLTAAPPPPPR 10 20 30 40 70 80 90 100 110 120 pF1KE3 PGPCAYAAHGRGALAEAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPSPPRPTLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PGPCAYAAHGRGALAEAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPSPPRPTLAR 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 EDNEEDEDEPTETETSGEQLGISDNGGLFVMDEDATLQDLPPFCESDPESTDDGSLSEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 EDNEEDEDEPTETETSGEQLGISDNGGLFVMDEDATLQDLPPFCESDPESTDDGSLSEET 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 PAGPPTCSVPPASALPTQQYAKSLPVSVPVWGFKEKRTEARSSDEENGPPSSPDLDRIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PAGPPTCSVPPASALPTQQYAKSLPVSVPVWGFKEKRTEARSSDEENGPPSSPDLDRIAA 170 180 190 200 210 220 250 260 270 pF1KE3 SMRALVLREAEDTQVFGDLPRPRLNTSDFQKLKRKY :::::::::::::::::::::::::::::::::::: CCDS12 SMRALVLREAEDTQVFGDLPRPRLNTSDFQKLKRKY 230 240 250 276 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:24:18 2016 done: Mon Nov 7 03:24:18 2016 Total Scan time: 3.300 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]