FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3242, 565 aa 1>>>pF1KE3242 565 - 565 aa - 565 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.5956+/-0.000362; mu= -0.9754+/- 0.022 mean_var=242.5882+/-50.059, 0's: 0 Z-trim(122.1): 175 B-trim: 570 in 1/55 Lambda= 0.082345 statistics sampled from 39387 (39590) to 39387 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.783), E-opt: 0.2 (0.464), width: 16 Scan time: 9.390 The best scores are: opt bits E(85289) NP_036607 (OMIM: 604729) ubiquitin carboxyl-termin ( 565) 3900 476.4 1e-133 NP_001014443 (OMIM: 604729) ubiquitin carboxyl-ter ( 565) 3900 476.4 1e-133 XP_016856529 (OMIM: 604729) PREDICTED: ubiquitin c ( 594) 3900 476.4 1.1e-133 NP_001306776 (OMIM: 604729) ubiquitin carboxyl-ter ( 594) 3900 476.4 1.1e-133 NP_001306777 (OMIM: 604729) ubiquitin carboxyl-ter ( 551) 3438 421.5 3.4e-117 XP_016856527 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 3201 393.4 1.1e-108 XP_016856526 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 3201 393.4 1.1e-108 XP_016856528 (OMIM: 604729) PREDICTED: ubiquitin c ( 639) 3201 393.4 1.1e-108 XP_016856525 (OMIM: 604729) PREDICTED: ubiquitin c ( 668) 3201 393.4 1.2e-108 XP_011507716 (OMIM: 604729) PREDICTED: ubiquitin c ( 415) 2667 329.9 1e-89 XP_016856530 (OMIM: 604729) PREDICTED: ubiquitin c ( 455) 1922 241.4 4.8e-63 XP_016856531 (OMIM: 604729) PREDICTED: ubiquitin c ( 330) 1066 139.6 1.5e-32 XP_016874028 (OMIM: 604725) PREDICTED: ubiquitin c ( 352) 789 106.7 1.3e-22 NP_001230688 (OMIM: 604725) ubiquitin carboxyl-ter ( 362) 789 106.7 1.3e-22 NP_741994 (OMIM: 604725) ubiquitin carboxyl-termin ( 396) 789 106.7 1.4e-22 XP_005271779 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 789 106.9 2e-22 XP_005271778 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 789 106.9 2e-22 NP_004196 (OMIM: 604725) ubiquitin carboxyl-termin ( 605) 789 106.9 2e-22 XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 495 72.1 9e-12 XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 495 72.1 9e-12 NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012) 495 72.1 9.6e-12 XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 495 72.1 1e-11 XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 495 72.1 1e-11 XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 495 72.1 1e-11 XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 495 72.1 1e-11 XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 495 72.1 1e-11 NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118) 495 72.1 1e-11 XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 495 72.1 1e-11 NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118) 495 72.1 1e-11 XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 452 66.7 1.7e-10 XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 452 66.7 1.7e-10 NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 452 66.8 1.8e-10 XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 452 66.8 1.9e-10 XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 452 66.8 1.9e-10 XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 452 66.8 1.9e-10 NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 452 66.8 2e-10 XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 403 60.8 8.1e-09 XP_005269318 (OMIM: 604731) PREDICTED: ubiquitin c ( 648) 395 60.1 2.6e-08 XP_016875774 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 395 60.2 3.2e-08 XP_016875773 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 395 60.2 3.2e-08 NP_006304 (OMIM: 604731) ubiquitin carboxyl-termin ( 952) 395 60.2 3.5e-08 NP_001239007 (OMIM: 604731) ubiquitin carboxyl-ter ( 981) 395 60.2 3.5e-08 XP_011542290 (OMIM: 300050) PREDICTED: ubiquitin c ( 690) 389 59.4 4.4e-08 XP_005272731 (OMIM: 300050) PREDICTED: ubiquitin c ( 690) 389 59.4 4.4e-08 NP_004642 (OMIM: 300050) ubiquitin carboxyl-termin ( 963) 389 59.5 5.7e-08 NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916) 377 58.1 1.5e-07 NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963) 377 58.1 1.5e-07 XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 344 54.1 2e-06 NP_963920 (OMIM: 615146) ubiquitin carboxyl-termin ( 828) 344 54.1 2.1e-06 XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin c ( 903) 344 54.1 2.2e-06 >>NP_036607 (OMIM: 604729) ubiquitin carboxyl-terminal h (565 aa) initn: 3900 init1: 3900 opt: 3900 Z-score: 2521.5 bits: 476.4 E(85289): 1e-133 Smith-Waterman score: 3900; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:1-565) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 DFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPV 490 500 510 520 530 540 550 560 pF1KE3 SENQVASSEGYVLFYQLMQEPPRCL ::::::::::::::::::::::::: NP_036 SENQVASSEGYVLFYQLMQEPPRCL 550 560 >>NP_001014443 (OMIM: 604729) ubiquitin carboxyl-termina (565 aa) initn: 3900 init1: 3900 opt: 3900 Z-score: 2521.5 bits: 476.4 E(85289): 1e-133 Smith-Waterman score: 3900; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:1-565) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPV 490 500 510 520 530 540 550 560 pF1KE3 SENQVASSEGYVLFYQLMQEPPRCL ::::::::::::::::::::::::: NP_001 SENQVASSEGYVLFYQLMQEPPRCL 550 560 >>XP_016856529 (OMIM: 604729) PREDICTED: ubiquitin carbo (594 aa) initn: 3900 init1: 3900 opt: 3900 Z-score: 2521.2 bits: 476.4 E(85289): 1.1e-133 Smith-Waterman score: 3900; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:30-594) 10 20 30 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAP ::::::::::::::::::::::::::::::: XP_016 MAGCGGAQREDCSRPERTLSTKVQPVVSTMPQASEHRLGRTREPPVNIQPRVGSKLPFAP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE3 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE3 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE3 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE3 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE3 VQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHS 490 500 510 520 530 540 520 530 540 550 560 pF1KE3 GSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL 550 560 570 580 590 >>NP_001306776 (OMIM: 604729) ubiquitin carboxyl-termina (594 aa) initn: 3900 init1: 3900 opt: 3900 Z-score: 2521.2 bits: 476.4 E(85289): 1.1e-133 Smith-Waterman score: 3900; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:30-594) 10 20 30 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAP ::::::::::::::::::::::::::::::: NP_001 MAGCGGAQREDCSRPERTLSTKVQPVVSTMPQASEHRLGRTREPPVNIQPRVGSKLPFAP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE3 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE3 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE3 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE3 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE3 VQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHS 490 500 510 520 530 540 520 530 540 550 560 pF1KE3 GSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL 550 560 570 580 590 >>NP_001306777 (OMIM: 604729) ubiquitin carboxyl-termina (551 aa) initn: 3422 init1: 3422 opt: 3438 Z-score: 2225.1 bits: 421.5 E(85289): 3.4e-117 Smith-Waterman score: 3761; 97.5% identity (97.5% similar) in 565 aa overlap (1-565:1-551) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPV ::::::::::::::::: ::::::::::::::::::::::::::::: NP_001 DFPLQRLSLGDFASDKA--------------GSVHYGHYTALCRCQTGWHVYNDSRVSPV 490 500 510 520 550 560 pF1KE3 SENQVASSEGYVLFYQLMQEPPRCL ::::::::::::::::::::::::: NP_001 SENQVASSEGYVLFYQLMQEPPRCL 530 540 550 >>XP_016856527 (OMIM: 604729) PREDICTED: ubiquitin carbo (639 aa) initn: 3191 init1: 3191 opt: 3201 Z-score: 2072.0 bits: 393.4 E(85289): 1.1e-108 Smith-Waterman score: 3442; 87.6% identity (87.6% similar) in 597 aa overlap (1-523:1-597) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_016 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHILIFRFLLLLGYLPYILF 430 440 450 460 470 480 pF1KE3 --------------------------------------------------------LNRF :::: XP_016 PPCFQRIEFSLGKVCHPLFHKMLPVCREWGEDSFQDRRSSPQRPTASQMLLNQGLDLNRF 490 500 510 520 530 540 470 480 490 500 510 520 pF1KE3 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ 550 560 570 580 590 600 530 540 550 560 pF1KE3 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL XP_016 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL 610 620 630 >-- initn: 300 init1: 300 opt: 300 Z-score: 209.4 bits: 48.8 E(85289): 6.3e-05 Smith-Waterman score: 300; 100.0% identity (100.0% similar) in 42 aa overlap (524-565:598-639) 500 510 520 530 540 550 pF1KE3 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL :::::::::::::::::::::::::::::: XP_016 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL 570 580 590 600 610 620 560 pF1KE3 FYQLMQEPPRCL :::::::::::: XP_016 FYQLMQEPPRCL 630 >>XP_016856526 (OMIM: 604729) PREDICTED: ubiquitin carbo (639 aa) initn: 3191 init1: 3191 opt: 3201 Z-score: 2072.0 bits: 393.4 E(85289): 1.1e-108 Smith-Waterman score: 3442; 87.6% identity (87.6% similar) in 597 aa overlap (1-523:1-597) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_016 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHILIFRFLLLLGYLPYILF 430 440 450 460 470 480 pF1KE3 --------------------------------------------------------LNRF :::: XP_016 PPCFQRIEFSLGKVCHPLFHKMLPVCREWGEDSFQDRRSSPQRPTASQMLLNQGLDLNRF 490 500 510 520 530 540 470 480 490 500 510 520 pF1KE3 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ 550 560 570 580 590 600 530 540 550 560 pF1KE3 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL XP_016 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL 610 620 630 >-- initn: 300 init1: 300 opt: 300 Z-score: 209.4 bits: 48.8 E(85289): 6.3e-05 Smith-Waterman score: 300; 100.0% identity (100.0% similar) in 42 aa overlap (524-565:598-639) 500 510 520 530 540 550 pF1KE3 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL :::::::::::::::::::::::::::::: XP_016 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL 570 580 590 600 610 620 560 pF1KE3 FYQLMQEPPRCL :::::::::::: XP_016 FYQLMQEPPRCL 630 >>XP_016856528 (OMIM: 604729) PREDICTED: ubiquitin carbo (639 aa) initn: 3191 init1: 3191 opt: 3201 Z-score: 2072.0 bits: 393.4 E(85289): 1.1e-108 Smith-Waterman score: 3442; 87.6% identity (87.6% similar) in 597 aa overlap (1-523:1-597) 10 20 30 40 50 60 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASGPNPMLRPLPPRPGLPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPLPSRTNLARSKSVSSGDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRLGGFPGPPTLFSIRTEPPASH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCF 370 380 390 400 410 420 430 440 450 460 pF1KE3 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_016 NLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHILIFRFLLLLGYLPYILF 430 440 450 460 470 480 pF1KE3 --------------------------------------------------------LNRF :::: XP_016 PPCFQRIEFSLGKVCHPLFHKMLPVCREWGEDSFQDRRSSPQRPTASQMLLNQGLDLNRF 490 500 510 520 530 540 470 480 490 500 510 520 pF1KE3 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQ 550 560 570 580 590 600 530 540 550 560 pF1KE3 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL XP_016 TGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL 610 620 630 >-- initn: 300 init1: 300 opt: 300 Z-score: 209.4 bits: 48.8 E(85289): 6.3e-05 Smith-Waterman score: 300; 100.0% identity (100.0% similar) in 42 aa overlap (524-565:598-639) 500 510 520 530 540 550 pF1KE3 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL :::::::::::::::::::::::::::::: XP_016 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL 570 580 590 600 610 620 560 pF1KE3 FYQLMQEPPRCL :::::::::::: XP_016 FYQLMQEPPRCL 630 >>XP_016856525 (OMIM: 604729) PREDICTED: ubiquitin carbo (668 aa) initn: 3191 init1: 3191 opt: 3201 Z-score: 2071.7 bits: 393.4 E(85289): 1.2e-108 Smith-Waterman score: 3442; 87.6% identity (87.6% similar) in 597 aa overlap (1-523:30-626) 10 20 30 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAP ::::::::::::::::::::::::::::::: XP_016 MAGCGGAQREDCSRPERTLSTKVQPVVSTMPQASEHRLGRTREPPVNIQPRVGSKLPFAP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE3 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE3 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE3 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE3 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT 430 440 450 460 470 480 460 pF1KE3 VQRFPRILVLH------------------------------------------------- ::::::::::: XP_016 VQRFPRILVLHILIFRFLLLLGYLPYILFPPCFQRIEFSLGKVCHPLFHKMLPVCREWGE 490 500 510 520 530 540 470 480 490 pF1KE3 -------------------------LNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKA ::::::::::::::::::::::::::::::::::: XP_016 DSFQDRRSSPQRPTASQMLLNQGLDLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKA 550 560 570 580 590 600 500 510 520 530 540 550 pF1KE3 GSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQL :::::::::::::::::::::::::: XP_016 GSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQL 610 620 630 640 650 660 >-- initn: 300 init1: 300 opt: 300 Z-score: 209.2 bits: 48.8 E(85289): 6.5e-05 Smith-Waterman score: 300; 100.0% identity (100.0% similar) in 42 aa overlap (524-565:627-668) 500 510 520 530 540 550 pF1KE3 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL :::::::::::::::::::::::::::::: XP_016 SDKAGSPVYQLYALCNHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVL 600 610 620 630 640 650 560 pF1KE3 FYQLMQEPPRCL :::::::::::: XP_016 FYQLMQEPPRCL 660 >>XP_011507716 (OMIM: 604729) PREDICTED: ubiquitin carbo (415 aa) initn: 2667 init1: 2667 opt: 2667 Z-score: 1731.8 bits: 329.9 E(85289): 1e-89 Smith-Waterman score: 2667; 100.0% identity (100.0% similar) in 386 aa overlap (1-386:30-415) 10 20 30 pF1KE3 MPQASEHRLGRTREPPVNIQPRVGSKLPFAP ::::::::::::::::::::::::::::::: XP_011 MAGCGGAQREDCSRPERTLSTKVQPVVSTMPQASEHRLGRTREPPVNIQPRVGSKLPFAP 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RARSKERRNPASGPNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GSPPPTVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RRSTSLRRLGGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGH 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE3 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWH 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE3 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE3 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQA 370 380 390 400 410 400 410 420 430 440 450 pF1KE3 TTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLT 565 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:24:53 2016 done: Mon Nov 7 03:24:54 2016 Total Scan time: 9.390 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]