FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9676, 288 aa 1>>>pF1KE9676 288 - 288 aa - 288 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6420+/-0.000793; mu= 13.5648+/- 0.048 mean_var=67.3537+/-13.386, 0's: 0 Z-trim(107.5): 16 B-trim: 2 in 1/52 Lambda= 0.156276 statistics sampled from 9610 (9616) to 9610 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.295), width: 16 Scan time: 2.060 The best scores are: opt bits E(32554) CCDS35063.1 CENPP gene_id:401541|Hs108|chr9 ( 288) 1873 431.0 5e-121 CCDS69618.1 CENPP gene_id:401541|Hs108|chr9 ( 115) 645 153.9 4.9e-38 >>CCDS35063.1 CENPP gene_id:401541|Hs108|chr9 (288 aa) initn: 1873 init1: 1873 opt: 1873 Z-score: 2286.3 bits: 431.0 E(32554): 5e-121 Smith-Waterman score: 1873; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288) 10 20 30 40 50 60 pF1KE9 MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MDAELAEVRALQAEIAALRRACEDPPAPWEEKSRVQKSFQAIHQFNLEGWKSSKDLKNQL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GHLESELSFLSTLTGINIRNHSKQTEDLTSTEMTEKSIRKVLQRHRLSGNCHMVTFQLEF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 QILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEERKDLFMFFRSLHFFVEWFEYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QILEIQNKERLSSAVTDLNIIMEPTECSELSEFVSRAEERKDLFMFFRSLHFFVEWFEYR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 KRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 KRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLT 190 200 210 220 230 240 250 260 270 280 pF1KE9 KVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN :::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 KVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN 250 260 270 280 >>CCDS69618.1 CENPP gene_id:401541|Hs108|chr9 (115 aa) initn: 645 init1: 645 opt: 645 Z-score: 796.3 bits: 153.9 E(32554): 4.9e-38 Smith-Waterman score: 645; 99.0% identity (100.0% similar) in 101 aa overlap (188-288:15-115) 160 170 180 190 200 210 pF1KE9 EERKDLFMFFRSLHFFVEWFEYRKRTFKHLKEKYPDAVYLSEGPSSCSMGIRSASRPGFE .::::::::::::::::::::::::::::: CCDS69 MEAPSWSVLQRSGDEEKYPDAVYLSEGPSSCSMGIRSASRPGFE 10 20 30 40 220 230 240 250 260 270 pF1KE9 LVIVWRIQIDEDGKVFPKLDLLTKVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 LVIVWRIQIDEDGKVFPKLDLLTKVPQRALELDKNRAIETAPLSFRTLVGLLGIEAALES 50 60 70 80 90 100 280 pF1KE9 LIKSLCAEENN ::::::::::: CCDS69 LIKSLCAEENN 110 288 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:26:55 2016 done: Mon Nov 7 03:26:55 2016 Total Scan time: 2.060 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]