(Linear) (Six-base) MAPSORT of: KIAA1588.seq Check: 7514 from: 1 to: 1785 KIAA1588.orf With 182 enzymes: SgfI * March 2, 2010 14:24 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 770 1515 1570 1599 1683 1785 Size: 770 745 55 29 84 102 Fragments arranged by size: 770 745 102 84 55 29 AflII C'TTAA_G Cuts at: 0 1297 1785 Size: 1297 488 AflIII A'CryG_T Cuts at: 0 1085 1785 Size: 1085 700 AleI CACnn'nnGTG Cuts at: 0 1013 1785 Size: 1013 772 AlwNI CAG_nnn'CTG Cuts at: 0 761 1785 Size: 761 1024 ApaLI G'TGCA_C Cuts at: 0 1089 1639 1785 Size: 1089 550 146 Fragments arranged by size: 1089 550 146 ApoI r'AATT_y Cuts at: 0 64 102 1785 Size: 64 38 1683 Fragments arranged by size: 1683 64 38 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 274 307 1785 Size: 274 33 1478 Fragments arranged by size: 1478 274 33 BamHI G'GATC_C Cuts at: 0 1649 1785 Size: 1649 136 BbsI GAAGACnn'nnnn_ Cuts at: 0 1168 1279 1437 1558 1785 Size: 1168 111 158 121 227 Fragments arranged by size: 1168 227 158 121 111 BclI T'GATC_A Cuts at: 0 924 1785 Size: 924 861 BfrBI ATG'CAT Cuts at: 0 663 856 1785 Size: 663 193 929 Fragments arranged by size: 929 663 193 Bme1580I G_kGCm'C Cuts at: 0 1093 1643 1785 Size: 1093 550 142 Fragments arranged by size: 1093 550 142 BmgBI CAC'GTC Cuts at: 0 29 1785 Size: 29 1756 BmrI ACTGGGnnnn_n' Cuts at: 0 140 295 446 1785 Size: 140 155 151 1339 Fragments arranged by size: 1339 155 151 140 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 380 1768 1785 Size: 380 1388 17 Fragments arranged by size: 1388 380 17 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 37 151 280 1343 1765 1785 Size: 37 114 129 1063 422 20 Fragments arranged by size: 1063 422 129 114 37 20 BsaAI yAC'GTr Cuts at: 0 1056 1728 1785 Size: 1056 672 57 Fragments arranged by size: 1056 672 57 BsaBI GATnn'nnATC Cuts at: 0 1234 1785 Size: 1234 551 BsaWI w'CCGG_w Cuts at: 0 860 985 1785 Size: 860 125 800 Fragments arranged by size: 860 800 125 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1570 1600 1785 Size: 1570 30 185 Fragments arranged by size: 1570 185 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 349 352 367 1785 Size: 349 3 15 1418 Fragments arranged by size: 1418 349 15 3 BseYI C'CCAG_C Cuts at: 0 307 1785 Size: 307 1478 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 141 401 774 1785 Size: 141 260 373 1011 Fragments arranged by size: 1011 373 260 141 BsiEI CG_ry'CG Cuts at: 0 948 1785 Size: 948 837 BsiHKAI G_wGCw'C Cuts at: 0 1055 1093 1643 1785 Size: 1055 38 550 142 Fragments arranged by size: 1055 550 142 38 BsiWI C'GTAC_G Cuts at: 0 1586 1785 Size: 1586 199 BsmI GAATG_Cn' Cuts at: 0 856 1186 1429 1597 1681 1785 Size: 856 330 243 168 84 104 Fragments arranged by size: 856 330 243 168 104 84 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1407 1785 Size: 1407 378 Bsp1286I G_dGCh'C Cuts at: 0 1055 1093 1643 1785 Size: 1055 38 550 142 Fragments arranged by size: 1055 550 142 38 BspEI T'CCGG_A Cuts at: 0 860 1785 Size: 860 925 BsrFI r'CCGG_y Cuts at: 0 475 1785 Size: 475 1310 BsrGI T'GTAC_A Cuts at: 0 242 1785 Size: 242 1543 BssSI C'ACGA_G Cuts at: 0 696 1204 1785 Size: 696 508 581 Fragments arranged by size: 696 581 508 BstAPI GCAn_nnn'nTGC Cuts at: 0 761 1097 1785 Size: 761 336 688 Fragments arranged by size: 761 688 336 BstBI TT'CG_AA Cuts at: 0 515 1785 Size: 515 1270 BstYI r'GATC_y Cuts at: 0 1649 1785 Size: 1649 136 Bsu36I CC'TnA_GG Cuts at: 0 793 1717 1785 Size: 793 924 68 Fragments arranged by size: 924 793 68 BtgI C'CryG_G Cuts at: 0 1250 1785 Size: 1250 535 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 948 1785 Size: 948 837 BtsI GCAGTG_nn' Cuts at: 0 129 1102 1270 1522 1785 Size: 129 973 168 252 263 Fragments arranged by size: 973 263 252 168 129 DraIII CAC_nnn'GTG Cuts at: 0 148 1097 1155 1785 Size: 148 949 58 630 Fragments arranged by size: 949 630 148 58 EaeI y'GGCC_r Cuts at: 0 945 1785 Size: 945 840 EagI C'GGCC_G Cuts at: 0 945 1785 Size: 945 840 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 1482 1662 1785 Size: 1482 180 123 Fragments arranged by size: 1482 180 123 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 37 151 280 770 1343 1515 1570 1599 Size: 37 114 129 490 573 172 55 29 Cuts at: 1599 1683 1765 1785 Size: 84 82 20 Fragments arranged by size: 573 490 172 129 114 84 82 55 37 29 20 EcoO109I rG'GnC_Cy Cuts at: 0 575 995 1785 Size: 575 420 790 Fragments arranged by size: 790 575 420 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1143 1785 Size: 1143 642 HaeII r_GCGC'y Cuts at: 0 365 377 1785 Size: 365 12 1408 Fragments arranged by size: 1408 365 12 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 382 414 564 596 1192 1224 1444 1476 Size: 382 32 150 32 596 32 220 32 Cuts at: 1476 1696 1728 1785 Size: 220 32 57 Fragments arranged by size: 596 382 220 220 150 57 32 32 32 32 32 HincII GTy'rAC Cuts at: 0 1544 1785 Size: 1544 241 HindIII A'AGCT_T Cuts at: 0 1022 1358 1785 Size: 1022 336 427 Fragments arranged by size: 1022 427 336 MluI A'CGCG_T Cuts at: 0 1085 1785 Size: 1085 700 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1148 1652 1785 Size: 1148 504 133 Fragments arranged by size: 1148 504 133 MslI CAynn'nnrTG Cuts at: 0 640 1013 1338 1767 1785 Size: 640 373 325 429 18 Fragments arranged by size: 640 429 373 325 18 MspA1I CmG'CkG Cuts at: 0 1115 1785 Size: 1115 670 NsiI A_TGCA'T Cuts at: 0 665 858 1785 Size: 665 193 927 Fragments arranged by size: 927 665 193 NspI r_CATG'y Cuts at: 0 645 891 1563 1785 Size: 645 246 672 222 Fragments arranged by size: 672 645 246 222 PflMI CCAn_nnn'nTGG Cuts at: 0 105 1155 1785 Size: 105 1050 630 Fragments arranged by size: 1050 630 105 PfoI T'CCnGG_A Cuts at: 0 53 1210 1785 Size: 53 1157 575 Fragments arranged by size: 1157 575 53 PmlI CAC'GTG Cuts at: 0 1056 1728 1785 Size: 1056 672 57 Fragments arranged by size: 1056 672 57 PshAI GACnn'nnGTC Cuts at: 0 839 1785 Size: 839 946 PstI C_TGCA'G Cuts at: 0 841 1785 Size: 841 944 SfcI C'TryA_G Cuts at: 0 267 837 1785 Size: 267 570 948 Fragments arranged by size: 948 570 267 SmlI C'TyrA_G Cuts at: 0 1297 1785 Size: 1297 488 StuI AGG'CCT Cuts at: 0 912 1528 1612 1785 Size: 912 616 84 173 Fragments arranged by size: 912 616 173 84 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 49 159 1785 Size: 49 110 1626 Fragments arranged by size: 1626 110 49 TatI w'GTAC_w Cuts at: 0 242 1785 Size: 242 1543 XmnI GAAnn'nnTTC Cuts at: 0 772 1024 1276 1360 1444 1612 1696 1785 Size: 772 252 252 84 84 168 84 89 Fragments arranged by size: 772 252 252 168 89 84 84 84 Enzymes that do cut: AcuI AflII AflIII AleI AlwNI ApaLI ApoI BaeI BamHI BbsI BclI BfrBI Bme1580I BmgBI BmrI BplI BpmI BsaAI BsaBI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsiWI BsmI BsmBI Bsp1286I BspEI BsrFI BsrGI BssSI BstAPI BstBI BstYI Bsu36I BtgI BtgZI BtsI DraIII EaeI EagI EciI Eco57MI EcoO109I FalI HaeII Hin4I HincII HindIII MluI MmeI MslI MspA1I NsiI NspI PflMI PfoI PmlI PshAI PstI SfcI SmlI StuI TaqII TatI XmnI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AfeI AgeI AhdI AlfI AloI ApaI AscI AseI AsiSI AvaI AvrII BanI BanII BbeI BbvCI BcgI BciVI BglI BglII BlpI BmtI Bpu10I BpuEI BsaI BsaHI BspHI BspMI BsrBI BsrDI BssHII BstEII BstXI BstZ17I ClaI CspCI DraI DrdI EarI EcoICRI EcoNI EcoRI EcoRV FseI FspI FspAI HpaI KasI KpnI MfeI MscI NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI PacI PasI PciI PmeI PpiI PpuMI PsiI PspOMI PspXI PsrI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI StyI SwaI TstI Tth111I XbaI XcmI XhoI XmaI ZraI