Result of FASTA (ccds) for
pFN21AE0340
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0340, 507 aa
1>>>pF1KE0340 507 - 507 aa - 507 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3951+/-0.000823; mu= 18.4953+/- 0.049
mean_var=76.5985+/-15.244, 0's: 0 Z-trim(107.4): 14 B-trim: 0 in 0/54
Lambda= 0.146543
statistics sampled from 9567 (9576) to 9567 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.294), width: 16
Scan time: 3.250
The best scores are: opt bits E(32554)
CCDS14007.1 XPNPEP3 gene_id:63929|Hs108|chr22 ( 507) 3450 738.9 3e-213
CCDS42544.1 PEPD gene_id:5184|Hs108|chr19 ( 493) 464 107.6 3.2e-23
CCDS54244.1 PEPD gene_id:5184|Hs108|chr19 ( 429) 376 89.0 1.1e-17
CCDS54245.1 PEPD gene_id:5184|Hs108|chr19 ( 452) 316 76.3 7.9e-14
>>CCDS14007.1 XPNPEP3 gene_id:63929|Hs108|chr22 (507 aa)
initn: 3450 init1: 3450 opt: 3450 Z-score: 3941.9 bits: 738.9 E(32554): 3e-213
Smith-Waterman score: 3450; 100.0% identity (100.0% similar) in 507 aa overlap (1-507:1-507)
10 20 30 40 50 60
pF1KE0 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPWLLSAPKLVPAVANVRGLSGCMLCSQRRYSLQPVPERRIPNRYLGQPSPFTHPHLLRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPTYYMSNDIPYTFHQDNN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGADILAY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCPH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAPEKFRGLGVRIEDDVVV
430 440 450 460 470 480
490 500
pF1KE0 TQDSPLILSADCPKEMNDIEQICSQAS
:::::::::::::::::::::::::::
CCDS14 TQDSPLILSADCPKEMNDIEQICSQAS
490 500
>>CCDS42544.1 PEPD gene_id:5184|Hs108|chr19 (493 aa)
initn: 383 init1: 130 opt: 464 Z-score: 530.3 bits: 107.6 E(32554): 3.2e-23
Smith-Waterman score: 572; 29.3% identity (57.1% similar) in 468 aa overlap (72-500:23-476)
50 60 70 80 90 100
pF1KE0 PNRYLGQPSPFTHPHLLRPGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLS
.:: :..: ..:. :.:. .:::.
CCDS42 MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGS---IVVLQ
10 20 30 40
110 120 130 140 150
pF1KE0 N--PTYYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPS
. : . .: :.:.. : . : :: :.. :: . ::::: :
CCDS42 GGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGK------STLFVPRLPAS
50 60 70 80 90 100
160 170 180 190 200 210
pF1KE0 RELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYM
. : : . . .::.. ..:. .: ..: . .. .: ... :
CCDS42 HATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLT----LRGVNTDSGSVCR
110 120 130 140 150
220 230 240 250 260 270
pF1KE0 QPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEE
. .. .: . . .. : . :..:. :.: .. ..:..:.: :.: . :. ..:
CCDS42 EASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKE
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE0 AFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMVLLDGGC
: . :: : .::. .: . ..:. : .::: . :.. :..:.: :.: :
CCDS42 YELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGG
220 230 240 250 260 270
340 350 360 370 380 390
pF1KE0 ESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQ
: :..:::: ..:.::.::: : .:::::. .: .. ::. ... . . .
CCDS42 EYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLE
280 290 300 310 320 330
400 410 420 430 440
pF1KE0 KLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP-----------RSL--
.: .::.. .. . . . :: .::.::.::::. .: :::
CCDS42 ELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRT
340 350 360 370 380 390
450 460 470 480
pF1KE0 --PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIEDDVVVTQ
::::::.:.:::::. . .... ..:::.: ::::.:::::
CCDS42 ARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVT-
400 410 420 430 440 450
490 500
pF1KE0 DSPLILSADCPKEMNDIEQICSQAS
:: . : . :. ...::
CCDS42 DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
460 470 480 490
>>CCDS54244.1 PEPD gene_id:5184|Hs108|chr19 (429 aa)
initn: 339 init1: 130 opt: 376 Z-score: 430.7 bits: 89.0 E(32554): 1.1e-17
Smith-Waterman score: 484; 33.7% identity (61.6% similar) in 294 aa overlap (244-500:120-412)
220 230 240 250 260 270
pF1KE0 LHSDYMQPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTS
:..:. :.: .. ..:..:.: :.: .
CCDS54 SGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV
90 100 110 120 130 140
280 290 300 310 320
pF1KE0 KAPVEEAFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMV
:. ..: : . :: : .::. .: . ..:. : .::: . :.. :..:.:
CCDS54 KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMC
150 160 170 180 190 200
330 340 350 360 370 380
pF1KE0 LLDGGCESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMM
:.: : : :..:::: ..:.::.::: : .:::::. .: .. ::. ... .
CCDS54 LFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLA
210 220 230 240 250 260
390 400 410 420 430
pF1KE0 LTLIGQKLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP----------
. ..: .::.. .. . . . :: .::.::.::::. .:
CCDS54 DRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPG
270 280 290 300 310 320
440 450 460 470
pF1KE0 -RSL----PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIED
::: ::::::.:.:::::. . .... ..:::.: ::::.
CCDS54 LRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEE
330 340 350 360 370 380
480 490 500
pF1KE0 DVVVTQDSPLILSADCPKEMNDIEQICSQAS
::::: :: . : . :. ...::
CCDS54 DVVVT-DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
390 400 410 420
>>CCDS54245.1 PEPD gene_id:5184|Hs108|chr19 (452 aa)
initn: 383 init1: 130 opt: 316 Z-score: 361.8 bits: 76.3 E(32554): 7.9e-14
Smith-Waterman score: 453; 27.6% identity (51.5% similar) in 468 aa overlap (72-500:23-435)
50 60 70 80 90 100
pF1KE0 PNRYLGQPSPFTHPHLLRPGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLS
.:: :..: ..:. :.:. .:::.
CCDS54 MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGS---IVVLQ
10 20 30 40
110 120 130 140 150
pF1KE0 N--PTYYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPS
. : . .: :.:.. : . : :: :.. :: . ::::: :
CCDS54 GGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGK------STLFVPRLPAS
50 60 70 80 90 100
160 170 180 190 200 210
pF1KE0 RELWDGPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYM
. : : . . .::.. ..:. .: ..: :: .
CCDS54 HATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK------------PS-------VL
110 120 130 140
220 230 240 250 260 270
pF1KE0 QPLTEAKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEE
: ... : . : . : : .... . . ..: .
CCDS54 LTLRGVNTDSGSVCREA-----------SFDGISKFEVNNTILHPEIVECL---------
150 160 170 180
280 290 300 310 320 330
pF1KE0 AFLYAKFEFECRARGA-DILAYPPVVAGGNRSNTLHY----VKNNQLIKDGEMVLLDGGC
:: : .::. .: . ..:. : .::: . :.. :..:.: :.: :
CCDS54 ------FEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGG
190 200 210 220 230
340 350 360 370 380 390
pF1KE0 ESSCYVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQ
: :..:::: ..:.::.::: : .:::::. .: .. ::. ... . . .
CCDS54 EYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLE
240 250 260 270 280 290
400 410 420 430 440
pF1KE0 KLKDLGIMK-NIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMP-----------RSL--
.: .::.. .. . . . :: .::.::.::::. .: :::
CCDS54 ELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRT
300 310 320 330 340 350
450 460 470 480
pF1KE0 --PLQPGMVITIEPGIYIPED---------------DKDAPEKFRGLG-VRIEDDVVVTQ
::::::.:.:::::. . .... ..:::.: ::::.:::::
CCDS54 ARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVT-
360 370 380 390 400 410
490 500
pF1KE0 DSPLILSADCPKEMNDIEQICSQAS
:: . : . :. ...::
CCDS54 DSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK
420 430 440 450
507 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:13:11 2016 done: Thu Nov 3 15:13:11 2016
Total Scan time: 3.250 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]