Result of FASTA (ccds) for
pFN21AE3313
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3313, 847 aa
1>>>pF1KE3313 847 - 847 aa - 847 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6216+/-0.00115; mu= 13.0596+/- 0.068
mean_var=70.3257+/-13.953, 0's: 0 Z-trim(101.0): 28 B-trim: 0 in 0/52
Lambda= 0.152939
statistics sampled from 6329 (6339) to 6329 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.548), E-opt: 0.2 (0.195), width: 16
Scan time: 2.850
The best scores are: opt bits E(32554)
CCDS33318.1 FASTKD1 gene_id:79675|Hs108|chr2 ( 847) 5578 1240.7 0
CCDS63051.1 FASTKD1 gene_id:79675|Hs108|chr2 ( 804) 4214 939.7 0
>>CCDS33318.1 FASTKD1 gene_id:79675|Hs108|chr2 (847 aa)
initn: 5578 init1: 5578 opt: 5578 Z-score: 6645.5 bits: 1240.7 E(32554): 0
Smith-Waterman score: 5578; 100.0% identity (100.0% similar) in 847 aa overlap (1-847:1-847)
10 20 30 40 50 60
pF1KE3 MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AILSEKQVGCAFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AILSEKQVGCAFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LYVTQQFAGEAHDPLVEALVTEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LYVTQQFAGEAHDPLVEALVTEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HRNLETTQDLSSLSVLMVNISSLISRHFQQQLVNKTELLFDTIDSSEVNVAKSIAKFLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HRNLETTQDLSSLSVLMVNISSLISRHFQQQLVNKTELLFDTIDSSEVNVAKSIAKFLRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQFNSFEFIIMAKKKLTEMIPLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQFNSFEFIIMAKKKLTEMIPLC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 NHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGDMESRNSCLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGDMESRNSCLIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 QKLDHYGRQRLQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QKLDHYGRQRLQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SFISSTDYLSTLLLDRIASVAVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SFISSTDYLSTLLLDRIASVAVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 LNSYLGILDPFILVFLGFSLATLEYFPEDLLKAIFNIKFLARLDSQLEILSPSRSARVQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LNSYLGILDPFILVFLGFSLATLEYFPEDLLKAIFNIKFLARLDSQLEILSPSRSARVQF
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 HLMELNRSVCLECPEFQIPWFHDRFCQQYNKGIGGMDGTQQQIFKMLAEVLGGINCVKAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HLMELNRSVCLECPEFQIPWFHDRFCQQYNKGIGGMDGTQQQIFKMLAEVLGGINCVKAS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 VLTPYYHKVDFECILDKRKKPLPYGSHNIALGQLPEMPWESNIEIVGSRLPPGAERIALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VLTPYYHKVDFECILDKRKKPLPYGSHNIALGQLPEMPWESNIEIVGSRLPPGAERIALE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 FLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQFEWNSMALSTKDARMDYLRECIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQFEWNSMALSTKDARMDYLRECIF
790 800 810 820 830 840
pF1KE3 GEVKSCL
:::::::
CCDS33 GEVKSCL
>>CCDS63051.1 FASTKD1 gene_id:79675|Hs108|chr2 (804 aa)
initn: 4197 init1: 4197 opt: 4214 Z-score: 5019.4 bits: 939.7 E(32554): 0
Smith-Waterman score: 5156; 94.8% identity (94.9% similar) in 847 aa overlap (1-847:1-804)
10 20 30 40 50 60
pF1KE3 MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AILSEKQVGCAFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 AILSEKQVGCAFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LYVTQQFAGEAHDPLVEALVTEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LYVTQQFAGEAHDPLVEALVTEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HRNLETTQDLSSLSVLMVNISSLISRHFQQQLVNKTELLFDTIDSSEVNVAKSIAKFLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HRNLETTQDLSSLSVLMVNISSLISRHFQQQLVNKTELLFDTIDSSEVNVAKSIAKFLRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQFNSFEFIIMAKKKLTEMIPLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQFNSFEFIIMAKKKLTEMIPLC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 NHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGDMESRNSCLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGDMESRNSCLIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 QKLDHYGRQRLQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 QKLDHYGRQRLQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SFISSTDYLSTLLLDRIASVAVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SFISSTDYLSTLLLDRIASVAVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 LNSYLGILDPFILVFLGFSLATLEYFPEDLLKAIFNIKFLARLDSQLEILSPSRSARVQF
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LNSYLGILDPFILVFLGFSLATLEYFPEDLLKAIFNIKFLARLDSQLE------------
610 620 630 640
670 680 690 700 710 720
pF1KE3 HLMELNRSVCLECPEFQIPWFHDRFCQQYNKGIGGMDGTQQQIFKMLAEVLGGINCVKAS
.::::::::::::::::::::::::::::
CCDS63 -------------------------------SIGGMDGTQQQIFKMLAEVLGGINCVKAS
650 660 670
730 740 750 760 770 780
pF1KE3 VLTPYYHKVDFECILDKRKKPLPYGSHNIALGQLPEMPWESNIEIVGSRLPPGAERIALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VLTPYYHKVDFECILDKRKKPLPYGSHNIALGQLPEMPWESNIEIVGSRLPPGAERIALE
680 690 700 710 720 730
790 800 810 820 830 840
pF1KE3 FLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQFEWNSMALSTKDARMDYLRECIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 FLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQFEWNSMALSTKDARMDYLRECIF
740 750 760 770 780 790
pF1KE3 GEVKSCL
:::::::
CCDS63 GEVKSCL
800
847 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:32:06 2016 done: Mon Nov 7 03:32:07 2016
Total Scan time: 2.850 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]