FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1131, 259 aa 1>>>pF1KE1131 259 - 259 aa - 259 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0163+/-0.000963; mu= 6.9802+/- 0.058 mean_var=96.8229+/-19.245, 0's: 0 Z-trim(106.9): 19 B-trim: 35 in 1/52 Lambda= 0.130342 statistics sampled from 9238 (9241) to 9238 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.284), width: 16 Scan time: 2.400 The best scores are: opt bits E(32554) CCDS46011.1 USE1 gene_id:55850|Hs108|chr19 ( 259) 1625 315.6 2.1e-86 >>CCDS46011.1 USE1 gene_id:55850|Hs108|chr19 (259 aa) initn: 1625 init1: 1625 opt: 1625 Z-score: 1664.5 bits: 315.6 E(32554): 2.1e-86 Smith-Waterman score: 1625; 99.6% identity (99.6% similar) in 259 aa overlap (1-259:1-259) 10 20 30 40 50 60 pF1KE1 MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQALKVHASKPASEVINE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQALKVHASKPASEVINE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRARYTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 YSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRARYTSE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 MRSELLGTDSAEPEMDVRKRTGVAGSQPVSEKQSAAELDLVLQRHQNLQEKLAEEMLGLA ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: CCDS46 MRSELLGTDSAEPEMDVRKRTGVAGSQPVSEKQLAAELDLVLQRHQNLQEKLAEEMLGLA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKTESERLEQHTQKSVNWLLWAMLII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKTESERLEQHTQKSVNWLLWAMLII 190 200 210 220 230 240 250 pF1KE1 VCFIFISMILFIRIMPKLK ::::::::::::::::::: CCDS46 VCFIFISMILFIRIMPKLK 250 259 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:34:39 2016 done: Mon Nov 7 03:34:39 2016 Total Scan time: 2.400 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]