FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8351, 274 aa 1>>>pF1KB8351 274 - 274 aa - 274 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6328+/-0.000336; mu= 9.1409+/- 0.021 mean_var=105.2434+/-21.572, 0's: 0 Z-trim(117.3): 45 B-trim: 41 in 1/54 Lambda= 0.125019 statistics sampled from 29157 (29206) to 29157 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.342), width: 16 Scan time: 7.200 The best scores are: opt bits E(85289) NP_061882 (OMIM: 606277) toll-interacting protein ( 274) 1856 345.0 9.1e-95 NP_001305441 (OMIM: 606277) toll-interacting prote ( 224) 1466 274.6 1.2e-73 NP_001305443 (OMIM: 606277) toll-interacting prote ( 205) 1416 265.5 5.6e-71 NP_001305445 (OMIM: 606277) toll-interacting prote ( 213) 1033 196.5 3.6e-50 XP_016873420 (OMIM: 606277) PREDICTED: toll-intera ( 148) 1006 191.5 7.8e-49 NP_001305444 (OMIM: 606277) toll-interacting prote ( 80) 390 80.2 1.3e-15 >>NP_061882 (OMIM: 606277) toll-interacting protein isof (274 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 1822.3 bits: 345.0 E(85289): 9.1e-95 Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 274 aa overlap (1-274:1-274) 10 20 30 40 50 60 pF1KB8 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM 190 200 210 220 230 240 250 260 270 pF1KB8 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP :::::::::::::::::::::::::::::::::: NP_061 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 250 260 270 >>NP_001305441 (OMIM: 606277) toll-interacting protein i (224 aa) initn: 1466 init1: 1466 opt: 1466 Z-score: 1443.5 bits: 274.6 E(85289): 1.2e-73 Smith-Waterman score: 1466; 100.0% identity (100.0% similar) in 213 aa overlap (62-274:12-224) 40 50 60 70 80 90 pF1KB8 QVQLDAQAAQQLQYGGAVGTVGRLNITVVQAKLAKNYGMTRMDPYCRLRLGYAVYETPTA :::::::::::::::::::::::::::::: NP_001 MATTVSTQRGPAKLAKNYGMTRMDPYCRLRLGYAVYETPTA 10 20 30 40 100 110 120 130 140 150 pF1KB8 HNGAKNPRWNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HNGAKNPRWNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKW 50 60 70 80 90 100 160 170 180 190 200 210 pF1KB8 YSLSGRQGDDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YSLSGRQGDDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSP 110 120 130 140 150 160 220 230 240 250 260 270 pF1KB8 GMVPVALPPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GMVPVALPPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 170 180 190 200 210 220 pF1KB8 EEP ::: NP_001 EEP >>NP_001305443 (OMIM: 606277) toll-interacting protein i (205 aa) initn: 1416 init1: 1416 opt: 1416 Z-score: 1395.3 bits: 265.5 E(85289): 5.6e-71 Smith-Waterman score: 1416; 100.0% identity (100.0% similar) in 205 aa overlap (70-274:1-205) 40 50 60 70 80 90 pF1KB8 AQQLQYGGAVGTVGRLNITVVQAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPR :::::::::::::::::::::::::::::: NP_001 MTRMDPYCRLRLGYAVYETPTAHNGAKNPR 10 20 30 100 110 120 130 140 150 pF1KB8 WNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQG 40 50 60 70 80 90 160 170 180 190 200 210 pF1KB8 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 100 110 120 130 140 150 220 230 240 250 260 270 pF1KB8 PAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 160 170 180 190 200 >>NP_001305445 (OMIM: 606277) toll-interacting protein i (213 aa) initn: 1033 init1: 1033 opt: 1033 Z-score: 1021.7 bits: 196.5 E(85289): 3.6e-50 Smith-Waterman score: 1289; 77.7% identity (77.7% similar) in 274 aa overlap (1-274:1-213) 10 20 30 40 50 60 pF1KB8 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF : NP_001 Q----------------------------------------------------------- 130 140 150 160 170 180 pF1KB8 DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 --RAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV 70 80 90 100 110 190 200 210 220 230 240 pF1KB8 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM 120 130 140 150 160 170 250 260 270 pF1KB8 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP :::::::::::::::::::::::::::::::::: NP_001 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 180 190 200 210 >>XP_016873420 (OMIM: 606277) PREDICTED: toll-interactin (148 aa) initn: 1006 init1: 1006 opt: 1006 Z-score: 997.8 bits: 191.5 E(85289): 7.8e-49 Smith-Waterman score: 1006; 100.0% identity (100.0% similar) in 148 aa overlap (127-274:1-148) 100 110 120 130 140 150 pF1KB8 NPRWNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSG :::::::::::::::::::::::::::::: XP_016 MDDRIAWTHITIPESLRQGKVEDKWYSLSG 10 20 30 160 170 180 190 200 210 pF1KB8 RQGDDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RQGDDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPV 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB8 ALPPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALPPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 100 110 120 130 140 >>NP_001305444 (OMIM: 606277) toll-interacting protein i (80 aa) initn: 390 init1: 390 opt: 390 Z-score: 401.3 bits: 80.2 E(85289): 1.3e-15 Smith-Waterman score: 390; 100.0% identity (100.0% similar) in 61 aa overlap (1-61:1-61) 10 20 30 40 50 60 pF1KB8 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF : NP_001 QGCPLSVAPAWCPWPCPRPP 70 80 274 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:35:51 2016 done: Mon Nov 7 03:35:52 2016 Total Scan time: 7.200 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]