FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1106, 95 aa 1>>>pF1KE1106 95 - 95 aa - 95 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8177+/-0.000304; mu= 11.0341+/- 0.019 mean_var=48.7662+/- 9.782, 0's: 0 Z-trim(116.0): 10 B-trim: 1015 in 2/47 Lambda= 0.183660 statistics sampled from 26874 (26884) to 26874 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.315), width: 16 Scan time: 4.310 The best scores are: opt bits E(85289) NP_663626 (OMIM: 610176) secretoglobin family 1C m ( 95) 607 167.7 2.5e-42 XP_005252861 (OMIM: 610176) PREDICTED: secretoglob ( 138) 607 167.8 3.4e-42 NP_006542 (OMIM: 615061) secretoglobin family 1D m ( 90) 127 40.5 0.00046 NP_003348 (OMIM: 192020) uteroglobin precursor [Ho ( 91) 114 37.1 0.005 >>NP_663626 (OMIM: 610176) secretoglobin family 1C membe (95 aa) initn: 607 init1: 607 opt: 607 Z-score: 881.0 bits: 167.7 E(85289): 2.5e-42 Smith-Waterman score: 607; 98.9% identity (98.9% similar) in 95 aa overlap (1-95:1-95) 10 20 30 40 50 60 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_663 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK 10 20 30 40 50 60 70 80 90 pF1KE1 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA ::::::::: ::::::::::::::::::::::::: NP_663 AAMTELKSCIDGLQPMHKAELVKLLVQVLGSQDGA 70 80 90 >>XP_005252861 (OMIM: 610176) PREDICTED: secretoglobin f (138 aa) initn: 607 init1: 607 opt: 607 Z-score: 878.4 bits: 167.8 E(85289): 3.4e-42 Smith-Waterman score: 607; 98.9% identity (98.9% similar) in 95 aa overlap (1-95:44-138) 10 20 30 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFF :::::::::::::::::::::::::::::: XP_005 ANPGCNQERCCPVRHKIPGFWLEAAPETAGMKGSRALLLVALTLFCICRMATGEDNDEFF 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 MDFLQTLLVGTPEELYEGTLGKYNVNEDAKAAMTELKSCRDGLQPMHKAELVKLLVQVLG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: XP_005 MDFLQTLLVGTPEELYEGTLGKYNVNEDAKAAMTELKSCIDGLQPMHKAELVKLLVQVLG 80 90 100 110 120 130 pF1KE1 SQDGA ::::: XP_005 SQDGA >>NP_006542 (OMIM: 615061) secretoglobin family 1D membe (90 aa) initn: 69 init1: 51 opt: 127 Z-score: 194.0 bits: 40.5 E(85289): 0.00046 Smith-Waterman score: 127; 30.3% identity (68.5% similar) in 89 aa overlap (1-89:1-85) 10 20 30 40 50 60 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK :: : ::::.:.: : : .:..: . ..:. .... : :.. .:.:... .: NP_006 MKLSVCLLLVTLAL-C-CYQANAEFCPALVSELLDFFFISEP--LFKLSLAKFDAPPEAV 10 20 30 40 50 70 80 90 pF1KE1 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA :: .: : : .. .... ....::..: NP_006 AAKLGVKRCTDQMSLQKRSLIAEVLVKILKKCSV 60 70 80 90 >>NP_003348 (OMIM: 192020) uteroglobin precursor [Homo s (91 aa) initn: 128 init1: 66 opt: 114 Z-score: 175.3 bits: 37.1 E(85289): 0.005 Smith-Waterman score: 114; 30.8% identity (60.4% similar) in 91 aa overlap (1-91:1-87) 10 20 30 40 50 60 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK :: . .: ::.:.: : : :..: : . ..:::. :: ::... .. ..: . NP_003 MKLAVTLTLVTLAL-C-CSSASAEICPSF-QRVIETLLMDTPSS-YEAAMELFSPDQDMR 10 20 30 40 50 70 80 90 pF1KE1 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA : ..::. : : . ..::. .. : NP_003 EAGAQLKKLVDTLPQKPRESIIKLMEKIAQSSLCN 60 70 80 90 95 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:39:07 2016 done: Mon Nov 7 03:39:08 2016 Total Scan time: 4.310 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]