FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1106, 95 aa 1>>>pF1KE1106 95 - 95 aa - 95 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7763+/-0.000633; mu= 11.2048+/- 0.038 mean_var=49.8210+/- 9.900, 0's: 0 Z-trim(109.3): 6 B-trim: 234 in 1/49 Lambda= 0.181705 statistics sampled from 10797 (10803) to 10797 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.332), width: 16 Scan time: 1.490 The best scores are: opt bits E(32554) CCDS73933.1 SCGB1C2 gene_id:653486|Hs108|chr17 ( 95) 618 168.9 4.1e-43 CCDS41581.1 SCGB1C1 gene_id:147199|Hs108|chr11 ( 95) 607 166.0 3e-42 >>CCDS73933.1 SCGB1C2 gene_id:653486|Hs108|chr17 (95 aa) initn: 618 init1: 618 opt: 618 Z-score: 887.5 bits: 168.9 E(32554): 4.1e-43 Smith-Waterman score: 618; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95) 10 20 30 40 50 60 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK 10 20 30 40 50 60 70 80 90 pF1KE1 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA ::::::::::::::::::::::::::::::::::: CCDS73 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA 70 80 90 >>CCDS41581.1 SCGB1C1 gene_id:147199|Hs108|chr11 (95 aa) initn: 607 init1: 607 opt: 607 Z-score: 871.9 bits: 166.0 E(32554): 3e-42 Smith-Waterman score: 607; 98.9% identity (98.9% similar) in 95 aa overlap (1-95:1-95) 10 20 30 40 50 60 pF1KE1 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MKGSRALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAK 10 20 30 40 50 60 70 80 90 pF1KE1 AAMTELKSCRDGLQPMHKAELVKLLVQVLGSQDGA ::::::::: ::::::::::::::::::::::::: CCDS41 AAMTELKSCIDGLQPMHKAELVKLLVQVLGSQDGA 70 80 90 95 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:39:07 2016 done: Mon Nov 7 03:39:07 2016 Total Scan time: 1.490 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]