FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1117, 316 aa 1>>>pF1KE1117 316 - 316 aa - 316 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3530+/-0.000793; mu= 16.4830+/- 0.048 mean_var=93.5179+/-19.547, 0's: 0 Z-trim(109.9): 102 B-trim: 405 in 1/52 Lambda= 0.132625 statistics sampled from 11094 (11213) to 11094 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.344), width: 16 Scan time: 2.680 The best scores are: opt bits E(32554) CCDS13857.2 RFPL1 gene_id:5988|Hs108|chr22 ( 317) 2164 424.0 7.6e-119 CCDS43011.1 RFPL3 gene_id:10738|Hs108|chr22 ( 317) 1966 386.1 1.9e-107 CCDS46694.1 RFPL2 gene_id:10739|Hs108|chr22 ( 317) 1930 379.2 2.3e-105 CCDS13904.1 RFPL3 gene_id:10738|Hs108|chr22 ( 288) 1779 350.3 1.1e-96 CCDS43009.2 RFPL2 gene_id:10739|Hs108|chr22 ( 378) 1762 347.1 1.2e-95 CCDS46201.1 RFPL4A gene_id:342931|Hs108|chr19 ( 287) 1150 229.9 1.8e-60 CCDS59425.1 RFPL4AL1 gene_id:729974|Hs108|chr19 ( 287) 1149 229.7 2.1e-60 CCDS34515.1 RFPL4B gene_id:442247|Hs108|chr6 ( 263) 554 115.9 3.6e-26 CCDS10498.1 MEFV gene_id:4210|Hs108|chr16 ( 781) 505 106.9 5.2e-23 CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 ( 513) 495 104.8 1.4e-22 CCDS4611.1 BTN3A3 gene_id:10384|Hs108|chr6 ( 584) 495 104.9 1.6e-22 CCDS4612.2 BTN3A3 gene_id:10384|Hs108|chr6 ( 535) 486 103.1 4.9e-22 CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 ( 475) 482 102.3 7.7e-22 CCDS47388.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 461) 471 100.2 3.2e-21 CCDS4608.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 513) 471 100.3 3.5e-21 CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 ( 468) 455 97.2 2.7e-20 CCDS56405.1 BTN2A1 gene_id:11120|Hs108|chr6 ( 466) 454 97.0 3.1e-20 CCDS4613.1 BTN2A1 gene_id:11120|Hs108|chr6 ( 527) 454 97.0 3.4e-20 CCDS56403.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 313) 450 96.0 4e-20 CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 ( 488) 451 96.4 4.8e-20 CCDS4607.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 407) 450 96.1 4.8e-20 CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 ( 518) 451 96.4 5e-20 CCDS4606.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 523) 450 96.2 5.7e-20 CCDS4614.1 BTN1A1 gene_id:696|Hs108|chr6 ( 526) 450 96.2 5.8e-20 CCDS3851.1 TRIML1 gene_id:339976|Hs108|chr4 ( 468) 448 95.8 6.9e-20 CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 ( 485) 420 90.5 2.9e-18 CCDS475.1 ERMAP gene_id:114625|Hs108|chr1 ( 475) 414 89.3 6.4e-18 CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 ( 486) 402 87.0 3.2e-17 CCDS76745.1 TRIM69 gene_id:140691|Hs108|chr15 ( 263) 397 85.8 4e-17 CCDS76746.1 TRIM69 gene_id:140691|Hs108|chr15 ( 279) 397 85.8 4.2e-17 CCDS73719.1 TRIM69 gene_id:140691|Hs108|chr15 ( 296) 397 85.9 4.3e-17 CCDS10114.1 TRIM69 gene_id:140691|Hs108|chr15 ( 341) 397 85.9 4.8e-17 CCDS32220.1 TRIM69 gene_id:140691|Hs108|chr15 ( 500) 397 86.1 6.3e-17 CCDS4568.1 TRIM38 gene_id:10475|Hs108|chr6 ( 465) 393 85.3 1e-16 CCDS81297.1 TRIM62 gene_id:55223|Hs108|chr1 ( 354) 380 82.7 4.7e-16 CCDS376.1 TRIM62 gene_id:55223|Hs108|chr1 ( 475) 380 82.8 5.8e-16 CCDS4463.1 TRIM7 gene_id:81786|Hs108|chr5 ( 303) 369 80.5 1.8e-15 CCDS43414.1 TRIM7 gene_id:81786|Hs108|chr5 ( 329) 369 80.5 1.9e-15 CCDS4460.2 BTNL9 gene_id:153579|Hs108|chr5 ( 535) 370 80.9 2.4e-15 CCDS4462.1 TRIM7 gene_id:81786|Hs108|chr5 ( 511) 369 80.7 2.6e-15 CCDS34654.1 TRIM50 gene_id:135892|Hs108|chr7 ( 487) 349 76.9 3.6e-14 CCDS3808.1 TRIM60 gene_id:166655|Hs108|chr4 ( 471) 344 75.9 6.8e-14 CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 ( 477) 343 75.7 7.8e-14 CCDS3850.2 TRIML2 gene_id:205860|Hs108|chr4 ( 437) 341 75.3 9.6e-14 CCDS54959.1 BTNL8 gene_id:79908|Hs108|chr5 ( 316) 320 71.2 1.2e-12 CCDS53693.1 TRIM64B gene_id:642446|Hs108|chr11 ( 449) 321 71.5 1.4e-12 CCDS54958.1 BTNL8 gene_id:79908|Hs108|chr5 ( 375) 320 71.2 1.4e-12 CCDS54957.1 BTNL8 gene_id:79908|Hs108|chr5 ( 384) 320 71.2 1.4e-12 CCDS43413.1 BTNL8 gene_id:79908|Hs108|chr5 ( 500) 320 71.3 1.7e-12 CCDS60930.1 TRIM49D1 gene_id:399939|Hs108|chr11 ( 452) 314 70.2 3.5e-12 >>CCDS13857.2 RFPL1 gene_id:5988|Hs108|chr22 (317 aa) initn: 1254 init1: 1226 opt: 2164 Z-score: 2247.1 bits: 424.0 E(32554): 7.6e-119 Smith-Waterman score: 2164; 99.1% identity (99.1% similar) in 317 aa overlap (1-316:1-317) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFL-ISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: ::::::::::: ::::::::::::::::::::::::::::::::::::::::: CCDS13 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS13 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 250 260 270 280 290 300 300 310 pF1KE1 VINPGTTDAPVHPGEAK ::::::::::::::::: CCDS13 VINPGTTDAPVHPGEAK 310 >>CCDS43011.1 RFPL3 gene_id:10738|Hs108|chr22 (317 aa) initn: 1079 init1: 1079 opt: 1966 Z-score: 2042.4 bits: 386.1 E(32554): 1.9e-107 Smith-Waterman score: 1966; 90.9% identity (96.5% similar) in 317 aa overlap (1-316:1-317) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::.:: CCDS43 MKRLSLVTTNRLSPQGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCTVC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM .:::::::::::::::::::::::::.:::::. :::::.:::::::::::::::::::: CCDS43 LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFL-ISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: ::::::::::: ::::::::::: :::::::::::::::.::::::::::::: CCDS43 RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR :::::::::::::::::::::: ::.:.:::: :::::::::::::::::::::::.::: CCDS43 YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP ::::::::::::::::::::::.::::::::::::::::. :.:: : :::..:::::: CCDS43 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICP 250 260 270 280 290 300 300 310 pF1KE1 VINPGTTDAPVHPGEAK ..: :::::::.::::: CCDS43 LMNSGTTDAPVRPGEAK 310 >>CCDS46694.1 RFPL2 gene_id:10739|Hs108|chr22 (317 aa) initn: 1075 init1: 1075 opt: 1930 Z-score: 2005.2 bits: 379.2 E(32554): 2.3e-105 Smith-Waterman score: 1930; 89.9% identity (95.3% similar) in 317 aa overlap (1-316:1-317) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC ::::::::::::::::::. :::::::::::::::::::::::::::::::::::::::: CCDS46 MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM .::::::::::::::::::: ::::.::::: . :::::::::::::::::::::::::: CCDS46 LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFL-ISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: ::::.:::::: ::::::::::: : :::::::::::::.::::::::::::: CCDS46 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR ::::::::::::::::::::::::::.:::: ::::::::::.::::.::::::::::: CCDS46 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP ::::::::::::::::::::::.::::::::::::::::. :.:: : :::..:::::: CCDS46 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 250 260 270 280 290 300 300 310 pF1KE1 VINPGTTDAPVHPGEAK ..: :::::::.::::: CCDS46 LMNSGTTDAPVRPGEAK 310 >>CCDS13904.1 RFPL3 gene_id:10738|Hs108|chr22 (288 aa) initn: 1079 init1: 1079 opt: 1779 Z-score: 1849.5 bits: 350.3 E(32554): 1.1e-96 Smith-Waterman score: 1779; 90.3% identity (96.2% similar) in 288 aa overlap (30-316:1-288) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC ::::::::::::::::::::::::::::.:: CCDS13 MAALFQEASSCPVCSDYLEKPMSLECGCTVC 10 20 30 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM .:::::::::::::::::::::::::.:::::. :::::.:::::::::::::::::::: CCDS13 LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFL-ISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: ::::::::::: ::::::::::: :::::::::::::::.::::::::::::: CCDS13 RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR :::::::::::::::::::::: ::.:.:::: :::::::::::::::::::::::.::: CCDS13 YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP ::::::::::::::::::::::.::::::::::::::::. :.:: : :::..:::::: CCDS13 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICP 220 230 240 250 260 270 300 310 pF1KE1 VINPGTTDAPVHPGEAK ..: :::::::.::::: CCDS13 LMNSGTTDAPVRPGEAK 280 >>CCDS43009.2 RFPL2 gene_id:10739|Hs108|chr22 (378 aa) initn: 1075 init1: 1075 opt: 1762 Z-score: 1830.5 bits: 347.1 E(32554): 1.2e-95 Smith-Waterman score: 1762; 89.7% identity (95.2% similar) in 290 aa overlap (28-316:89-378) 10 20 30 40 50 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGC :::::::::::::::::::::::::::::: CCDS43 TNKRPSCAPSPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGC 60 70 80 90 100 110 60 70 80 90 100 110 pF1KE1 AVCFKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMN :::.::::::::::::::::::: ::::.::::: . ::::::::::::::::::::::: CCDS43 AVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMN 120 130 140 150 160 170 120 130 140 150 160 170 pF1KE1 PRMRKFQVDTTLDADTANNFL-ISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTC ::::::::: ::::.:::::: ::::::::::: : :::::::::::::.:::::::::: CCDS43 PRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTC 180 190 200 210 220 230 180 190 200 210 220 230 pF1KE1 GRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLF ::: ::::::::::::::::::::::::::.:::: ::::::::::.::::.:::::::: CCDS43 GRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLF 240 250 260 270 280 290 240 250 260 270 280 290 pF1KE1 VDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLS :::::::::::::::::::::::::.::::::::::::::::. :.:: : :::..::: CCDS43 VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLS 300 310 320 330 340 350 300 310 pF1KE1 ICPVINPGTTDAPVHPGEAK :::..: :::::::.::::: CCDS43 ICPLMNSGTTDAPVRPGEAK 360 370 >>CCDS46201.1 RFPL4A gene_id:342931|Hs108|chr19 (287 aa) initn: 705 init1: 705 opt: 1150 Z-score: 1199.1 bits: 229.9 E(32554): 1.8e-60 Smith-Waterman score: 1150; 58.5% identity (83.0% similar) in 282 aa overlap (30-310:1-282) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC :: :.. :::: ::. ..:.:: : : CCDS46 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACC 10 20 30 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM ..:.::::::: :: ::: ::.::::. :.:...:. :.: :::::::::..: ::::: CCDS46 LQCLNSLQKEPDGEGLLCRFCSVVSQKDDIKPKYKLRALVSIIKELEPKLKSVLTMNPRM 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFLI-SDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: :.:.:::::.:: :.:::: ::: ..:::.. :::::...:.::.:::: ::: CCDS46 RKFQVDMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRH 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR ::::::::: ::.:::.:::.:.:.: :..:.:: ::. :.:. ..:::::.: :.:. CCDS46 YWEVDVGTSQVWDVGVCKESVNRQGKIVLSSEHGFLTVGCREGKVFAASTVPMTPLWVSP 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP .:.:::::::.::....:... : :.::: . . :: . ::: :. :.:.:::: CCDS46 QLHRVGIFLDVGMRSIAFYNVSDGCHIYTFIEIPVCEPWRPFFAHKRGSQDDQSILSICS 220 230 240 250 260 270 300 310 pF1KE1 VINPGTTDAPVHPGEAK ::::....::: CCDS46 VINPSAASAPVSSEGK 280 >>CCDS59425.1 RFPL4AL1 gene_id:729974|Hs108|chr19 (287 aa) initn: 704 init1: 704 opt: 1149 Z-score: 1198.1 bits: 229.7 E(32554): 2.1e-60 Smith-Waterman score: 1149; 58.5% identity (83.0% similar) in 282 aa overlap (30-310:1-282) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC :: :.. :::: ::. ..:.:: : : CCDS59 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACC 10 20 30 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM ..:.::::::: :: ::: ::.::::. :.:...:. :.: :::::::::..: ::::: CCDS59 LQCLNSLQKEPDGEGLLCRFCSVVSQKDDIKPKYKLRALVSIIKELEPKLKSVLTMNPRM 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFLI-SDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :::::: :.:.:::::.:: :.:::: ::: ..:::.. :::::...:.::.:::: ::: CCDS59 RKFQVDMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRH 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR ::::::::: ::.:::.:::.:.:.:.:..:.:: ::. :.:. ..:::::.: :.:. CCDS59 YWEVDVGTSQVWDVGVCKESVNRQGKIELSSEHGFLTVGCREGKVFAASTVPMTPLWVSP 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSVLSICP .:.:::::::.::....:... : :. :: . . :: . ::: :. :.:.:::: CCDS59 QLHRVGIFLDVGMRSIAFYNVSDGCHINTFIEIPVCEPWRPFFAHKRGSQDDQSILSICS 220 230 240 250 260 270 300 310 pF1KE1 VINPGTTDAPVHPGEAK ::::.:..::: CCDS59 VINPSTASAPVSSEGK 280 >>CCDS34515.1 RFPL4B gene_id:442247|Hs108|chr6 (263 aa) initn: 535 init1: 176 opt: 554 Z-score: 583.3 bits: 115.9 E(32554): 3.6e-26 Smith-Waterman score: 554; 36.4% identity (64.7% similar) in 272 aa overlap (30-299:1-263) 10 20 30 40 50 60 pF1KE1 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC :: .: ::::: :.. .:: : . : CCDS34 MAKRLQAELSCPVCLDFFSCSISLSCTHVFC 10 20 30 70 80 90 100 110 120 pF1KE1 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM : ::. : : .: : : . .. ::. :. :. . .:.. :.. .. CCDS34 FDCIQRYILENHDFRAMCPLCRDVVKVPALEE-WQVSVLTLMTKQHNSRLEQSLHVREEL 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 RKFQVDTTLDADTANNFLI-SDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH :.:. :.:::: ::...:. :.::::.. : . ..::.. .. :.::.: :. :.: CCDS34 RHFREDVTLDAATASSLLVFSNDLRSAQ--C-KKIHHDLTKDPRLA-CVLGTPCFSSGQH 100 110 120 130 140 180 190 200 210 220 230 pF1KE1 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR ::::.:: :.::::.: . ::. : :.::: .:.. :. . :.: : . .. CCDS34 YWEVEVGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGA-IHANT-HLERIPASP 150 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDK-SVLSIC .:.::::::: .....:::.... .:: . . : : :: ..:.. .::.:: CCDS34 RLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLTIC 210 220 230 240 250 260 300 310 pF1KE1 PVINPGTTDAPVHPGEAK : CCDS34 P >>CCDS10498.1 MEFV gene_id:4210|Hs108|chr16 (781 aa) initn: 491 init1: 442 opt: 505 Z-score: 526.6 bits: 106.9 E(32554): 5.2e-23 Smith-Waterman score: 505; 43.4% identity (70.9% similar) in 182 aa overlap (125-304:598-779) 100 110 120 130 140 150 pF1KE1 QLERLASHIKELEPKLKKILQMNPRMRKFQVDTTLDADTAN-NFLISDDLRSVRSGCITQ :.. :::.:: :...::::.::: : . CCDS10 EKSTKYFSETLRSEMEMFNVPELIGAQAHAVNVILDAETAYPNLIFSDDLKSVRLGNKWE 570 580 590 600 610 620 160 170 180 190 200 210 pF1KE1 NRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERG : .::: : .:::: : ::.::::.:: .: : ::.:. :. ::: . :. : : CCDS10 RLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGDKTAWILGACKTSISRKGNMTLSPENG 630 640 650 660 670 680 220 230 240 250 260 270 pF1KE1 FWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVS .:.: . .. .::.:: : :.. . .:::::.:. . ..::... . ::.::: : : CCDS10 YWVVIMMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRVGSISFYNVTARSHIYTFASCS 690 700 710 720 730 740 280 290 300 310 pF1KE1 AEEPLHLFFAPPSPSNGDKSV-LSICPVINPGTTDAPVHPGEAK ::. .:.: . ..: ... :.:::: . : CCDS10 FSGPLQPIFSPGTRDGGKNTAPLTICPVGGQGPD 750 760 770 780 >>CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 (513 aa) initn: 596 init1: 437 opt: 495 Z-score: 518.6 bits: 104.8 E(32554): 1.4e-22 Smith-Waterman score: 495; 40.3% identity (68.9% similar) in 206 aa overlap (97-300:289-492) 70 80 90 100 110 120 pF1KE1 LQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVD : : . .... ..:: .. . . ..:: CCDS46 ERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQSDMEKIQELR-EAQLYSVD 260 270 280 290 300 310 130 140 150 160 170 180 pF1KE1 TTLDADTAN-NFLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDV .::: ::: ....::.::.:: . . :. : :::.. :.:::: : :::::::.: CCDS46 VTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRHYWEVEV 320 330 340 350 360 370 190 200 210 220 230 240 pF1KE1 GTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVG : ...: .:::..:: ::: . . . :::.::: :.. : : :.: : . ::::: CCDS46 GDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWALTSPMTALPLRTPLQRVG 380 390 400 410 420 430 250 260 270 280 290 300 pF1KE1 IFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPSNGDKSV-LSICPVINPG ::::. .:::... :..:: .. :.. .:. : :.: ... : :::. CCDS46 IFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSL-SYSGGKSAAPLIICPMSGID 440 450 460 470 480 490 310 pF1KE1 TTDAPVHPGEAK CCDS46 GFSGHVGNHGHSMETSP 500 510 316 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:39:47 2016 done: Mon Nov 7 03:39:47 2016 Total Scan time: 2.680 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]