Result of FASTA (omim) for
pFN21AB8652
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8652, 201 aa
1>>>pF1KB8652 201 - 201 aa - 201 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5664+/-0.000305; mu= 7.7641+/- 0.019
mean_var=92.1326+/-18.087, 0's: 0 Z-trim(117.5): 78 B-trim: 112 in 1/53
Lambda= 0.133619
statistics sampled from 29448 (29539) to 29448 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.346), width: 16
Scan time: 5.890
The best scores are: opt bits E(85289)
NP_002873 (OMIM: 601180) ran-specific GTPase-activ ( 201) 1335 266.8 1.7e-71
NP_001265569 (OMIM: 601180) ran-specific GTPase-ac ( 200) 1318 263.5 1.6e-70
NP_001265568 (OMIM: 601180) ran-specific GTPase-ac ( 278) 1310 262.0 6.2e-70
XP_016884379 (OMIM: 601180) PREDICTED: ran-specifi ( 271) 1135 228.3 8.7e-60
XP_011528593 (OMIM: 601180) PREDICTED: ran-specifi ( 151) 1007 203.5 1.4e-52
XP_011528591 (OMIM: 601180) PREDICTED: ran-specifi ( 204) 993 200.9 1.2e-51
XP_016884381 (OMIM: 601180) PREDICTED: ran-specifi ( 150) 990 200.2 1.3e-51
NP_001265570 (OMIM: 601180) ran-specific GTPase-ac ( 150) 990 200.2 1.3e-51
XP_016884380 (OMIM: 601180) PREDICTED: ran-specifi ( 221) 807 165.0 7.9e-41
XP_016860112 (OMIM: 601181,608033) PREDICTED: E3 S (2807) 598 125.2 9.9e-28
XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 598 125.2 1.1e-27
NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 598 125.2 1.1e-27
XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 598 125.2 1.1e-27
XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 598 125.2 1.1e-27
XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 598 125.2 1.1e-27
XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 598 125.2 1.1e-27
XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 598 125.2 1.1e-27
XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 S (2281) 496 105.5 6.8e-22
XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 S (2282) 496 105.5 6.8e-22
XP_016860333 (OMIM: 612709) PREDICTED: RANBP2-like (1480) 478 102.0 5.2e-21
XP_016860571 (OMIM: 612708) PREDICTED: RANBP2-like (1480) 478 102.0 5.2e-21
XP_005263804 (OMIM: 602752) PREDICTED: RANBP2-like (1660) 478 102.0 5.7e-21
XP_016860314 (OMIM: 602752) PREDICTED: RANBP2-like (1674) 478 102.0 5.8e-21
XP_011510035 (OMIM: 602752) PREDICTED: RANBP2-like (1686) 478 102.0 5.8e-21
XP_011510072 (OMIM: 612709) PREDICTED: RANBP2-like (1689) 478 102.0 5.8e-21
XP_016860570 (OMIM: 612708) PREDICTED: RANBP2-like (1700) 478 102.0 5.8e-21
XP_016860332 (OMIM: 612709) PREDICTED: RANBP2-like (1703) 478 102.0 5.8e-21
XP_011510071 (OMIM: 612709) PREDICTED: RANBP2-like (1715) 478 102.0 5.9e-21
XP_016860569 (OMIM: 612708) PREDICTED: RANBP2-like (1739) 478 102.0 6e-21
XP_016860331 (OMIM: 612709) PREDICTED: RANBP2-like (1739) 478 102.0 6e-21
XP_016860330 (OMIM: 612709) PREDICTED: RANBP2-like (1756) 478 102.0 6e-21
NP_001157935 (OMIM: 602752) RANBP2-like and GRIP d (1765) 478 102.0 6e-21
NP_005045 (OMIM: 612708) RANBP2-like and GRIP doma (1765) 478 102.0 6e-21
NP_001116835 (OMIM: 612709) RANBP2-like and GRIP d (1765) 478 102.0 6e-21
XP_016860329 (OMIM: 612709) PREDICTED: RANBP2-like (1782) 478 102.0 6.1e-21
XP_011510069 (OMIM: 612709) PREDICTED: RANBP2-like (1785) 478 102.0 6.1e-21
XP_006712857 (OMIM: 612708) PREDICTED: RANBP2-like (1791) 478 102.0 6.1e-21
XP_011510068 (OMIM: 612709) PREDICTED: RANBP2-like (1794) 478 102.0 6.1e-21
XP_016860328 (OMIM: 612709) PREDICTED: RANBP2-like (1811) 478 102.0 6.2e-21
XP_016860228 (OMIM: 612706) PREDICTED: ranBP2-like (1669) 476 101.6 7.5e-21
XP_011531154 (OMIM: 612704) PREDICTED: RANBP2-like (1697) 476 101.6 7.6e-21
XP_011531153 (OMIM: 612704) PREDICTED: RANBP2-like (1698) 476 101.6 7.6e-21
XP_011531152 (OMIM: 612704) PREDICTED: RANBP2-like (1712) 476 101.6 7.7e-21
XP_011531151 (OMIM: 612704) PREDICTED: RANBP2-like (1724) 476 101.6 7.7e-21
XP_016859596 (OMIM: 612704) PREDICTED: RANBP2-like (1740) 476 101.6 7.8e-21
NP_001019628 (OMIM: 612704) RANBP2-like and GRIP d (1748) 476 101.6 7.8e-21
NP_001071638 (OMIM: 612705) RANBP2-like and GRIP d (1756) 476 101.6 7.8e-21
NP_001137485 (OMIM: 612706) ranBP2-like and GRIP d (1758) 476 101.6 7.9e-21
XP_016860336 (OMIM: 612705) PREDICTED: RANBP2-like (1759) 476 101.6 7.9e-21
XP_016860335 (OMIM: 612705) PREDICTED: RANBP2-like (1760) 476 101.6 7.9e-21
>>NP_002873 (OMIM: 601180) ran-specific GTPase-activatin (201 aa)
initn: 1335 init1: 1335 opt: 1335 Z-score: 1404.7 bits: 266.8 E(85289): 1.7e-71
Smith-Waterman score: 1335; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
130 140 150 160 170 180
190 200
pF1KB8 AEKLEALSVKEETKEDAEEKQ
:::::::::::::::::::::
NP_002 AEKLEALSVKEETKEDAEEKQ
190 200
>>NP_001265569 (OMIM: 601180) ran-specific GTPase-activa (200 aa)
initn: 1135 init1: 1135 opt: 1318 Z-score: 1387.1 bits: 263.5 E(85289): 1.6e-70
Smith-Waterman score: 1318; 99.5% identity (99.5% similar) in 201 aa overlap (1-201:1-200)
10 20 30 40 50 60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK-GSGKNDHAEKV
130 140 150 160 170
190 200
pF1KB8 AEKLEALSVKEETKEDAEEKQ
:::::::::::::::::::::
NP_001 AEKLEALSVKEETKEDAEEKQ
180 190 200
>>NP_001265568 (OMIM: 601180) ran-specific GTPase-activa (278 aa)
initn: 1310 init1: 1310 opt: 1310 Z-score: 1376.5 bits: 262.0 E(85289): 6.2e-70
Smith-Waterman score: 1310; 97.5% identity (99.0% similar) in 201 aa overlap (1-201:78-278)
10 20 30
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPI
. ..:::::::::::::::::::::::::
NP_001 LVLWGCRPKRPRKRRTSLKLAWRGTFCSSSLKISEDTHEDHDTSTENTDESNHDPQFEPI
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 VSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLM
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 RRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQK
170 180 190 200 210 220
160 170 180 190 200
pF1KB8 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
230 240 250 260 270
>>XP_016884379 (OMIM: 601180) PREDICTED: ran-specific GT (271 aa)
initn: 1135 init1: 1135 opt: 1135 Z-score: 1194.3 bits: 228.3 E(85289): 8.7e-60
Smith-Waterman score: 1135; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)
10 20 30 40 50 60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGDVVPWVGGLLC
130 140 150 160 170 180
190 200
pF1KB8 AEKLEALSVKEETKEDAEEKQ
XP_016 RLTLHLTILPGGCFFCLPDKHSRVLWPPHVSRVMQLPGDTGASWGALSTCQCCWPQSNWA
190 200 210 220 230 240
>>XP_011528593 (OMIM: 601180) PREDICTED: ran-specific GT (151 aa)
initn: 1007 init1: 1007 opt: 1007 Z-score: 1065.0 bits: 203.5 E(85289): 1.4e-52
Smith-Waterman score: 1007; 100.0% identity (100.0% similar) in 151 aa overlap (51-201:1-151)
30 40 50 60 70 80
pF1KB8 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH
::::::::::::::::::::::::::::::
XP_011 MRAKLFRFASENDLPEWKERGTGDVKLLKH
10 20 30
90 100 110 120 130 140
pF1KB8 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 RFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK
100 110 120 130 140 150
pF1KB8 Q
:
XP_011 Q
>>XP_011528591 (OMIM: 601180) PREDICTED: ran-specific GT (204 aa)
initn: 1008 init1: 993 opt: 993 Z-score: 1048.3 bits: 200.9 E(85289): 1.2e-51
Smith-Waterman score: 993; 97.3% identity (98.7% similar) in 150 aa overlap (1-150:1-150)
10 20 30 40 50 60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
::::::::::::::::::::::::::. .
XP_011 VWNTHADFADECPKPELLAIRFLNAESEPRALGTCLTWGSPAWQRGGLCATNAVAFWGEG
130 140 150 160 170 180
>>XP_016884381 (OMIM: 601180) PREDICTED: ran-specific GT (150 aa)
initn: 807 init1: 807 opt: 990 Z-score: 1047.3 bits: 200.2 E(85289): 1.3e-51
Smith-Waterman score: 990; 99.3% identity (99.3% similar) in 151 aa overlap (51-201:1-150)
30 40 50 60 70 80
pF1KB8 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH
::::::::::::::::::::::::::::::
XP_016 MRAKLFRFASENDLPEWKERGTGDVKLLKH
10 20 30
90 100 110 120 130 140
pF1KB8 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 RFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_016 RFLNAENAQKFKTKFEECRKEIEEREKK-GSGKNDHAEKVAEKLEALSVKEETKEDAEEK
100 110 120 130 140
pF1KB8 Q
:
XP_016 Q
150
>>NP_001265570 (OMIM: 601180) ran-specific GTPase-activa (150 aa)
initn: 807 init1: 807 opt: 990 Z-score: 1047.3 bits: 200.2 E(85289): 1.3e-51
Smith-Waterman score: 990; 99.3% identity (99.3% similar) in 151 aa overlap (51-201:1-150)
30 40 50 60 70 80
pF1KB8 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH
::::::::::::::::::::::::::::::
NP_001 MRAKLFRFASENDLPEWKERGTGDVKLLKH
10 20 30
90 100 110 120 130 140
pF1KB8 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 RFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 RFLNAENAQKFKTKFEECRKEIEEREKK-GSGKNDHAEKVAEKLEALSVKEETKEDAEEK
100 110 120 130 140
pF1KB8 Q
:
NP_001 Q
150
>>XP_016884380 (OMIM: 601180) PREDICTED: ran-specific GT (221 aa)
initn: 807 init1: 807 opt: 807 Z-score: 854.0 bits: 165.0 E(85289): 7.9e-41
Smith-Waterman score: 807; 100.0% identity (100.0% similar) in 118 aa overlap (51-168:1-118)
30 40 50 60 70 80
pF1KB8 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH
::::::::::::::::::::::::::::::
XP_016 MRAKLFRFASENDLPEWKERGTGDVKLLKH
10 20 30
90 100 110 120 130 140
pF1KB8 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 RFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEK
::::::::::::::::::::::::::::
XP_016 RFLNAENAQKFKTKFEECRKEIEEREKKGDVVPWVGGLLCRLTLHLTILPGGCFFCLPDK
100 110 120 130 140 150
>>XP_016860112 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (2807 aa)
initn: 679 init1: 304 opt: 598 Z-score: 618.9 bits: 125.2 E(85289): 9.9e-28
Smith-Waterman score: 598; 50.3% identity (74.9% similar) in 199 aa overlap (1-197:1147-1339)
10 20 30
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPI
. .:. .:: : .. . :... :.:::.
XP_016 SSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETANKNHET-DGGSAHGDDDDDGPHFEPV
1120 1130 1140 1150 1160 1170
40 50 60 70 80
pF1KB8 VSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLL
: ::.. :.:: ::::::.: ::::::: :. :::::: :.::.:.:: .: ::::
XP_016 VPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVES--KEWKERGIGNVKILRHKTSGKIRLL
1180 1190 1200 1210 1220 1230
90 100 110 120 130 140
pF1KB8 MRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHA-DFADECPKPELLAIRFLNAENA
:::...:::::::::.: :.: :::::::..:: :: :.::: :::: ::::: . :.:
XP_016 MRREQVLKICANHYISPDMKLTPNAGSDRSFVW--HALDYADELPKPEQLAIRFKTPEEA
1240 1250 1260 1270 1280 1290
150 160 170 180 190 200
pF1KB8 QKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
:: :::: .. .. ... ..: .: ..... . . :. : ::
XP_016 ALFKCKFEEAQSILKAPGTNVAMASN-QAVRIVKEPTSHDNKDICKSDAGNLNFEFQVAK
1300 1310 1320 1330 1340 1350
XP_016 KEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKTSPENVQDRFAL
1360 1370 1380 1390 1400 1410
>--
initn: 529 init1: 268 opt: 496 Z-score: 512.6 bits: 105.5 E(85289): 8.2e-22
Smith-Waterman score: 496; 43.6% identity (73.4% similar) in 188 aa overlap (6-186:1995-2175)
10 20 30
pF1KB8 MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
: ..: :. .::..: : .:::.:..:
XP_016 DPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
1970 1980 1990 2000 2010 2020
40 50 60 70 80 90
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
:. :. : ::::. :...:.::::: .: . .::::: :..:.::.. .: .:.::::.
XP_016 EKVELVTGEEDEKVLYSQRVKLFRFDAE--VSQWKERGLGNLKILKNEVNGKLRMLMRRE
2030 2040 2050 2060 2070
100 110 120 130 140 150
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
..::.::::.:: :.::: .::::::.: .::.: : : :: .: . : :..::
XP_016 QVLKVCANHWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQ
2080 2090 2100 2110 2120 2130
160 170 180 190 200
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
:::::.. .. .: . .:. . . ::....
XP_016 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
2140 2150 2160 2170 2180 2190
XP_016 GSGTGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
2200 2210 2220 2230 2240 2250
>--
initn: 402 init1: 251 opt: 434 Z-score: 448.0 bits: 93.6 E(85289): 3.2e-18
Smith-Waterman score: 434; 43.9% identity (72.3% similar) in 155 aa overlap (12-164:2294-2445)
10 20 30
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
: .. :.: ..: : :::.: ::. :..
XP_016 TTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVS
2270 2280 2290 2300 2310 2320
40 50 60 70 80 90
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
. ::.:. .:. ::::.:. ..:. .::::: ::.:.:.. .. .:..::::..::.:
XP_016 SGEENEQVVFSHRAKLYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
2330 2340 2350 2360 2370 2380
100 110 120 130 140 150
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
::: ::: : :. :..:.:.: : :::: : : ::.:: . :..:: :.: .
XP_016 ANHRITPDMTLQNMKGTERVWLW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
2390 2400 2410 2420 2430 2440
160 170 180 190 200
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
:.
XP_016 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADATSEVEVSST
2450 2460 2470 2480 2490 2500
201 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:42:15 2016 done: Sat Nov 5 21:42:16 2016
Total Scan time: 5.890 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]