Result of FASTA (omim) for
pFN21AE0538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0538, 229 aa
1>>>pF1KE0538 229 - 229 aa - 229 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3824+/-0.000417; mu= 14.5289+/- 0.026
mean_var=93.6484+/-19.404, 0's: 0 Z-trim(112.7): 376 B-trim: 1026 in 2/49
Lambda= 0.132533
statistics sampled from 21225 (21703) to 21225 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.254), width: 16
Scan time: 4.950
The best scores are: opt bits E(85289)
XP_016858704 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_006712278 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016858703 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016858702 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016858707 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016858706 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
NP_001293087 (OMIM: 605412) rab-like protein 2A is ( 229) 1507 298.3 7.3e-81
NP_001293088 (OMIM: 605412) rab-like protein 2A is ( 229) 1507 298.3 7.3e-81
XP_016858708 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016858705 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1507 298.3 7.3e-81
XP_016884043 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1498 296.5 2.4e-80
XP_016884041 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1498 296.5 2.4e-80
XP_016884042 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1498 296.5 2.4e-80
XP_016884044 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1498 296.5 2.4e-80
NP_001124393 (OMIM: 605413) rab-like protein 2B is ( 229) 1498 296.5 2.4e-80
NP_001124391 (OMIM: 605413) rab-like protein 2B is ( 229) 1498 296.5 2.4e-80
NP_001124392 (OMIM: 605413) rab-like protein 2B is ( 229) 1498 296.5 2.4e-80
NP_001003789 (OMIM: 605413) rab-like protein 2B is ( 229) 1498 296.5 2.4e-80
XP_016858711 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1490 295.0 7e-80
XP_016858709 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1490 295.0 7e-80
XP_016858710 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1490 295.0 7e-80
NP_038198 (OMIM: 605412) rab-like protein 2A isofo ( 228) 1490 295.0 7e-80
NP_009013 (OMIM: 605412) rab-like protein 2A isofo ( 228) 1490 295.0 7e-80
XP_016858699 (OMIM: 605412) PREDICTED: rab-like pr ( 235) 1485 294.1 1.4e-79
XP_016858700 (OMIM: 605412) PREDICTED: rab-like pr ( 235) 1485 294.1 1.4e-79
XP_016884047 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1481 293.3 2.3e-79
NP_009012 (OMIM: 605413) rab-like protein 2B isofo ( 228) 1481 293.3 2.3e-79
XP_016884045 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1481 293.3 2.3e-79
XP_016884046 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1481 293.3 2.3e-79
XP_011528977 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1481 293.3 2.3e-79
NP_001124394 (OMIM: 605413) rab-like protein 2B is ( 228) 1481 293.3 2.3e-79
XP_016884039 (OMIM: 605413) PREDICTED: rab-like pr ( 235) 1476 292.3 4.5e-79
XP_011528975 (OMIM: 605413) PREDICTED: rab-like pr ( 235) 1476 292.3 4.5e-79
XP_016858701 (OMIM: 605412) PREDICTED: rab-like pr ( 234) 1468 290.8 1.3e-78
XP_016884040 (OMIM: 605413) PREDICTED: rab-like pr ( 234) 1459 289.1 4.3e-78
XP_016858696 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_006712270 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_011508811 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_005263626 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_016858693 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_016858694 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_016858695 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_016858692 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_006712271 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_005263627 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_006712272 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1129 226.0 4.3e-59
XP_016884033 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1125 225.2 7.3e-59
XP_011528973 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1125 225.2 7.3e-59
XP_011528972 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1125 225.2 7.3e-59
XP_016884032 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1125 225.2 7.3e-59
>>XP_016858704 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_006712278 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858703 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858702 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858707 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858706 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>NP_001293087 (OMIM: 605412) rab-like protein 2A isofor (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>NP_001293088 (OMIM: 605412) rab-like protein 2A isofor (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858708 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858705 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1572.7 bits: 298.3 E(85289): 7.3e-81
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
229 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:31:52 2016 done: Thu Nov 3 00:31:53 2016
Total Scan time: 4.950 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]