Result of FASTA (omim) for
pFN21AB6489
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6489, 329 aa
1>>>pF1KB6489 329 - 329 aa - 329 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3230+/-0.000394; mu= -5.0565+/- 0.025
mean_var=350.4828+/-72.813, 0's: 0 Z-trim(123.5): 48 B-trim: 819 in 1/51
Lambda= 0.068508
statistics sampled from 43443 (43505) to 43443 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.51), width: 16
Scan time: 8.620
The best scores are: opt bits E(85289)
XP_011511333 (OMIM: 607612) PREDICTED: phospholipi ( 329) 2386 248.9 1.1e-65
NP_001121776 (OMIM: 607612) phospholipid scramblas ( 329) 2386 248.9 1.1e-65
NP_001121777 (OMIM: 607612) phospholipid scramblas ( 329) 2386 248.9 1.1e-65
NP_065086 (OMIM: 607612) phospholipid scramblase 4 ( 329) 2386 248.9 1.1e-65
XP_005247711 (OMIM: 607612) PREDICTED: phospholipi ( 329) 2386 248.9 1.1e-65
XP_005247712 (OMIM: 607612) PREDICTED: phospholipi ( 329) 2386 248.9 1.1e-65
XP_011511207 (OMIM: 604170) PREDICTED: phospholipi ( 311) 1010 112.9 8.9e-25
NP_066928 (OMIM: 604170) phospholipid scramblase 1 ( 318) 1010 112.9 9.1e-25
XP_011511206 (OMIM: 604170) PREDICTED: phospholipi ( 318) 1010 112.9 9.1e-25
XP_016862118 (OMIM: 604170) PREDICTED: phospholipi ( 318) 1010 112.9 9.1e-25
XP_016862117 (OMIM: 604170) PREDICTED: phospholipi ( 319) 962 108.2 2.4e-23
NP_001186908 (OMIM: 607610) phospholipid scramblas ( 293) 918 103.8 4.7e-22
XP_011511321 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862392 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862391 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862387 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_011511315 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_011511323 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_011511324 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_011511325 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862393 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862390 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862388 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_011511322 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862389 (OMIM: 607610) PREDICTED: phospholipi ( 325) 918 103.8 5e-22
XP_016862410 (OMIM: 607612) PREDICTED: phospholipi ( 239) 896 101.5 1.8e-21
NP_001121778 (OMIM: 607612) phospholipid scramblas ( 239) 896 101.5 1.8e-21
XP_016862394 (OMIM: 607610) PREDICTED: phospholipi ( 297) 895 101.5 2.3e-21
XP_016862396 (OMIM: 607610) PREDICTED: phospholipi ( 297) 895 101.5 2.3e-21
XP_016862397 (OMIM: 607610) PREDICTED: phospholipi ( 297) 895 101.5 2.3e-21
XP_016862395 (OMIM: 607610) PREDICTED: phospholipi ( 297) 895 101.5 2.3e-21
NP_001186907 (OMIM: 607610) phospholipid scramblas ( 297) 895 101.5 2.3e-21
XP_016862398 (OMIM: 607610) PREDICTED: phospholipi ( 297) 895 101.5 2.3e-21
NP_001170775 (OMIM: 607612) phospholipid scramblas ( 224) 853 97.3 3.3e-20
XP_016862403 (OMIM: 607610) PREDICTED: phospholipi ( 224) 829 94.9 1.7e-19
XP_016862400 (OMIM: 607610) PREDICTED: phospholipi ( 224) 829 94.9 1.7e-19
XP_016862399 (OMIM: 607610) PREDICTED: phospholipi ( 224) 829 94.9 1.7e-19
NP_065092 (OMIM: 607610) phospholipid scramblase 2 ( 224) 829 94.9 1.7e-19
XP_016862404 (OMIM: 607610) PREDICTED: phospholipi ( 224) 829 94.9 1.7e-19
XP_005247595 (OMIM: 604170) PREDICTED: phospholipi ( 237) 780 90.1 5.1e-18
XP_011511209 (OMIM: 604170) PREDICTED: phospholipi ( 237) 780 90.1 5.1e-18
XP_011511208 (OMIM: 604170) PREDICTED: phospholipi ( 237) 780 90.1 5.1e-18
XP_016862401 (OMIM: 607610) PREDICTED: phospholipi ( 222) 723 84.4 2.4e-16
NP_001188505 (OMIM: 607611) phospholipid scramblas ( 295) 724 84.6 2.8e-16
NP_065093 (OMIM: 607611) phospholipid scramblase 3 ( 295) 724 84.6 2.8e-16
>>XP_011511333 (OMIM: 607612) PREDICTED: phospholipid sc (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_011 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_011 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
XP_011 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>NP_001121776 (OMIM: 607612) phospholipid scramblase 4 (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
NP_001 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>NP_001121777 (OMIM: 607612) phospholipid scramblase 4 (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
NP_001 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>NP_065086 (OMIM: 607612) phospholipid scramblase 4 iso (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_065 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_065 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
NP_065 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>XP_005247711 (OMIM: 607612) PREDICTED: phospholipid sc (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_005 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_005 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
XP_005 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>XP_005247712 (OMIM: 607612) PREDICTED: phospholipid sc (329 aa)
initn: 2386 init1: 2386 opt: 2386 Z-score: 1300.5 bits: 248.9 E(85289): 1.1e-65
Smith-Waterman score: 2386; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYSSHFLPGPPGTAVPPPTGYPGGLPMGY
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_005 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLRVTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_005 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
250 260 270 280 290 300
310 320
pF1KB6 DVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::::::::::::::::::::
XP_005 DVKMKAMIFGACFLIDFMYFERSPPQRSR
310 320
>>XP_011511207 (OMIM: 604170) PREDICTED: phospholipid sc (311 aa)
initn: 715 init1: 429 opt: 1010 Z-score: 565.8 bits: 112.9 E(85289): 8.9e-25
Smith-Waterman score: 1016; 48.9% identity (70.9% similar) in 313 aa overlap (22-329:15-307)
10 20 30 40 50
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDA---PPEYSSHFLPGPPGTAVPPPTGYPGGLP
::. : : :: ::.. ::: . :::.:. : :
XP_011 MNASHPETNLPVGYPPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLV
:. :.:: .:. .:: : :. .:: :::.: : :::::::::
XP_011 AGFPVPNQP----VYN-----QPVYNQ----PVGAAGVP--WMPAPQPPLNCPPGLEYLS
60 70 80 90
120 130 140 150 160 170
pF1KB6 QLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLR
:.:.: . :..: ::..: :::::.:.:::. : :: ..:::: ::: :::.::
XP_011 QIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLR
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 VTDCMGREIMTMQRPFRCT-CCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQ
. : ::.:..:..::.::. ::: :: ::.:.: :::: ::.: . :. : ..::
XP_011 IIDNMGQEVITLERPLRCSSCCCPCC---LQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQ
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 NEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIH
:::.:.:... ::: . .: .: ::.:::: .:.: ..:.:.: :..:::.: :.
XP_011 NEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQ
220 230 240 250 260 270
300 310 320
pF1KB6 FPLDLDVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::...:::::::::.:: . :...
XP_011 FPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW
280 290 300 310
>>NP_066928 (OMIM: 604170) phospholipid scramblase 1 [Ho (318 aa)
initn: 715 init1: 429 opt: 1010 Z-score: 565.7 bits: 112.9 E(85289): 9.1e-25
Smith-Waterman score: 1016; 48.9% identity (70.9% similar) in 313 aa overlap (22-329:22-314)
10 20 30 40 50
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDA---PPEYSSHFLPGPPGTAVPPPTGYPGGLP
::. : : :: ::.. ::: . :::.:. : :
NP_066 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLV
:. :.:: .:. .:: : :. .:: :::.: : :::::::::
NP_066 AGFPVPNQP----VYN-----QPVYNQ----PVGAAGVP--WMPAPQPPLNCPPGLEYLS
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 QLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLR
:.:.: . :..: ::..: :::::.:.:::. : :: ..:::: ::: :::.::
NP_066 QIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTDCMGREIMTMQRPFRCT-CCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQ
. : ::.:..:..::.::. ::: :: ::.:.: :::: ::.: . :. : ..::
NP_066 IIDNMGQEVITLERPLRCSSCCCPCC---LQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQ
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 NEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIH
:::.:.:... ::: . .: .: ::.:::: .:.: ..:.:.: :..:::.: :.
NP_066 NEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQ
230 240 250 260 270 280
300 310 320
pF1KB6 FPLDLDVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::...:::::::::.:: . :...
NP_066 FPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW
290 300 310
>>XP_011511206 (OMIM: 604170) PREDICTED: phospholipid sc (318 aa)
initn: 715 init1: 429 opt: 1010 Z-score: 565.7 bits: 112.9 E(85289): 9.1e-25
Smith-Waterman score: 1016; 48.9% identity (70.9% similar) in 313 aa overlap (22-329:22-314)
10 20 30 40 50
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDA---PPEYSSHFLPGPPGTAVPPPTGYPGGLP
::. : : :: ::.. ::: . :::.:. : :
XP_011 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLV
:. :.:: .:. .:: : :. .:: :::.: : :::::::::
XP_011 AGFPVPNQP----VYN-----QPVYNQ----PVGAAGVP--WMPAPQPPLNCPPGLEYLS
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 QLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLR
:.:.: . :..: ::..: :::::.:.:::. : :: ..:::: ::: :::.::
XP_011 QIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTDCMGREIMTMQRPFRCT-CCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQ
. : ::.:..:..::.::. ::: :: ::.:.: :::: ::.: . :. : ..::
XP_011 IIDNMGQEVITLERPLRCSSCCCPCC---LQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQ
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 NEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIH
:::.:.:... ::: . .: .: ::.:::: .:.: ..:.:.: :..:::.: :.
XP_011 NEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQ
230 240 250 260 270 280
300 310 320
pF1KB6 FPLDLDVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::...:::::::::.:: . :...
XP_011 FPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW
290 300 310
>>XP_016862118 (OMIM: 604170) PREDICTED: phospholipid sc (318 aa)
initn: 715 init1: 429 opt: 1010 Z-score: 565.7 bits: 112.9 E(85289): 9.1e-25
Smith-Waterman score: 1016; 48.9% identity (70.9% similar) in 313 aa overlap (22-329:22-314)
10 20 30 40 50
pF1KB6 MSGVVPTAPEQPAGEMENQTKPPDPRPDA---PPEYSSHFLPGPPGTAVPPPTGYPGGLP
::. : : :: ::.. ::: . :::.:. : :
XP_016 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLV
:. :.:: .:. .:: : :. .:: :::.: : :::::::::
XP_016 AGFPVPNQP----VYN-----QPVYNQ----PVGAAGVP--WMPAPQPPLNCPPGLEYLS
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 QLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYVVTEDTDDFTRNAYRTLRPFVLR
:.:.: . :..: ::..: :::::.:.:::. : :: ..:::: ::: :::.::
XP_016 QIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTDCMGREIMTMQRPFRCT-CCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQ
. : ::.:..:..::.::. ::: :: ::.:.: :::: ::.: . :. : ..::
XP_016 IIDNMGQEVITLERPLRCSSCCCPCC---LQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQ
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 NEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIH
:::.:.:... ::: . .: .: ::.:::: .:.: ..:.:.: :..:::.: :.
XP_016 NEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQ
230 240 250 260 270 280
300 310 320
pF1KB6 FPLDLDVKMKAMIFGACFLIDFMYFERSPPQRSR
:::::::::::...:::::::::.:: . :...
XP_016 FPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW
290 300 310
329 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:01:00 2016 done: Fri Nov 4 21:01:01 2016
Total Scan time: 8.620 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]