FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0453, 227 aa 1>>>pF1KE0453 227 - 227 aa - 227 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1028+/-0.000657; mu= 15.0213+/- 0.040 mean_var=60.6504+/-12.095, 0's: 0 Z-trim(110.0): 9 B-trim: 101 in 1/48 Lambda= 0.164686 statistics sampled from 11310 (11315) to 11310 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.348), width: 16 Scan time: 2.260 The best scores are: opt bits E(32554) CCDS10760.1 NUDT21 gene_id:11051|Hs108|chr16 ( 227) 1542 374.2 3.7e-104 >>CCDS10760.1 NUDT21 gene_id:11051|Hs108|chr16 (227 aa) initn: 1542 init1: 1542 opt: 1542 Z-score: 1983.4 bits: 374.2 E(32554): 3.7e-104 Smith-Waterman score: 1542; 99.1% identity (99.6% similar) in 227 aa overlap (1-227:1-227) 10 20 30 40 50 60 pF1KE0 MSVVPPNRSQTGWPRGVTQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MSVVPPNRSQTGWPRGVTQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELDPGEDEVEG :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: CCDS10 AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ 130 140 150 160 170 180 190 200 210 220 pF1KE0 EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQPLSRFNFIYN ::::::::::::::::::::::::::::::::::::: ::::::::: CCDS10 EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN 190 200 210 220 227 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:44:28 2016 done: Mon Nov 7 03:44:29 2016 Total Scan time: 2.260 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]