Result of FASTA (omim) for
pFN21AB6454
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6454, 350 aa
1>>>pF1KB6454 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8213+/-0.000394; mu= 12.9303+/- 0.024
mean_var=65.1167+/-13.182, 0's: 0 Z-trim(112.0): 14 B-trim: 38 in 1/49
Lambda= 0.158938
statistics sampled from 20778 (20790) to 20778 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.244), width: 16
Scan time: 7.340
The best scores are: opt bits E(85289)
NP_068596 (OMIM: 605778) NIF3-like protein 1 isofo ( 350) 2279 531.6 1e-150
NP_001135827 (OMIM: 605778) NIF3-like protein 1 is ( 350) 2279 531.6 1e-150
XP_011509887 (OMIM: 605778) PREDICTED: NIF3-like p ( 350) 2279 531.6 1e-150
XP_011509884 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_011509885 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_005246799 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
XP_011509886 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
NP_001129511 (OMIM: 605778) NIF3-like protein 1 is ( 377) 2279 531.6 1.1e-150
XP_016860119 (OMIM: 605778) PREDICTED: NIF3-like p ( 377) 2279 531.6 1.1e-150
NP_001135828 (OMIM: 605778) NIF3-like protein 1 is ( 285) 1421 334.8 1.4e-91
>>NP_068596 (OMIM: 605778) NIF3-like protein 1 isoform 2 (350 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.9 bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
310 320 330 340 350
>>NP_001135827 (OMIM: 605778) NIF3-like protein 1 isofor (350 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.9 bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
310 320 330 340 350
>>XP_011509887 (OMIM: 605778) PREDICTED: NIF3-like prote (350 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.9 bits: 531.6 E(85289): 1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLDKVMSAVKGIDGVSVTSFSARTGNEEQT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RINLNCTQKALMQVVDFLSRNKQLYQKTEILSLEKPLLLHTGMGRLCTLDESVSLATMID
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDA
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV
310 320 330 340 350
>>XP_011509884 (OMIM: 605778) PREDICTED: NIF3-like prote (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
XP_011 KINIILSETDRDPLQVV
370
>>XP_011509885 (OMIM: 605778) PREDICTED: NIF3-like prote (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
XP_011 KINIILSETDRDPLQVV
370
>>XP_005246799 (OMIM: 605778) PREDICTED: NIF3-like prote (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
XP_005 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
XP_005 KINIILSETDRDPLQVV
370
>>XP_011509886 (OMIM: 605778) PREDICTED: NIF3-like prote (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
XP_011 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
XP_011 KINIILSETDRDPLQVV
370
>>NP_001129511 (OMIM: 605778) NIF3-like protein 1 isofor (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
NP_001 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
NP_001 KINIILSETDRDPLQVV
370
>>XP_016860119 (OMIM: 605778) PREDICTED: NIF3-like prote (377 aa)
initn: 2279 init1: 2279 opt: 2279 Z-score: 2826.4 bits: 531.6 E(85289): 1.1e-150
Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:28-377)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
XP_016 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLEN
310 320 330 340 350 360
340 350
pF1KB6 KINIILSETDRDPLQVV
:::::::::::::::::
XP_016 KINIILSETDRDPLQVV
370
>>NP_001135828 (OMIM: 605778) NIF3-like protein 1 isofor (285 aa)
initn: 1442 init1: 1421 opt: 1421 Z-score: 1765.2 bits: 334.8 E(85289): 1.4e-91
Smith-Waterman score: 1421; 99.5% identity (99.5% similar) in 217 aa overlap (1-217:28-244)
10 20 30
pF1KB6 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
:::::::::::::::::::::::::::::::::
NP_001 MLSSCVRPVPTTVRFVDSLICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHPSKAPNYPTEGNHRVEFNVNYTQDLD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVMSAVKGIDGVSVTSFSARTGNEEQTRINLNCTQKALMQVVDFLSRNKQLYQKTEILSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 EKPLLLHTGMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAG
:: :
NP_001 EKSLKSKSWPCVLVLGAAFCRVLRLTFTSQVRCPIMILWMLLPKE
250 260 270 280
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:01:21 2016 done: Fri Nov 4 23:01:22 2016
Total Scan time: 7.340 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]