Result of FASTA (omim) for
pFN21AE0124
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0124, 327 aa
1>>>pF1KE0124 327 - 327 aa - 327 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8102+/-0.000294; mu= 6.8703+/- 0.019
mean_var=156.0650+/-32.642, 0's: 0 Z-trim(122.2): 11 B-trim: 1329 in 1/57
Lambda= 0.102665
statistics sampled from 39877 (39888) to 39877 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.468), width: 16
Scan time: 9.140
The best scores are: opt bits E(85289)
NP_055083 (OMIM: 605789,616734) microtubule-associ ( 327) 2202 337.1 3.1e-92
NP_001137299 (OMIM: 605789,616734) microtubule-ass ( 315) 1930 296.8 4e-80
NP_001137298 (OMIM: 605789,616734) microtubule-ass ( 284) 1898 292.0 1e-78
NP_001243349 (OMIM: 605789,616734) microtubule-ass ( 274) 1646 254.7 1.7e-67
NP_036458 (OMIM: 605788) microtubule-associated pr ( 281) 1142 180.0 5e-45
NP_001289979 (OMIM: 605788) microtubule-associated ( 281) 1142 180.0 5e-45
NP_036457 (OMIM: 603108) microtubule-associated pr ( 268) 1018 161.6 1.6e-39
XP_011526998 (OMIM: 603108) PREDICTED: microtubule ( 268) 1018 161.6 1.6e-39
XP_011531002 (OMIM: 605788) PREDICTED: microtubule ( 266) 849 136.6 5.6e-32
XP_016859086 (OMIM: 605788) PREDICTED: microtubule ( 266) 849 136.6 5.6e-32
XP_006712030 (OMIM: 605788) PREDICTED: microtubule ( 266) 849 136.6 5.6e-32
>>NP_055083 (OMIM: 605789,616734) microtubule-associated (327 aa)
initn: 2202 init1: 2202 opt: 2202 Z-score: 1776.9 bits: 337.1 E(85289): 3.1e-92
Smith-Waterman score: 2202; 99.7% identity (100.0% similar) in 327 aa overlap (1-327:1-327)
10 20 30 40 50 60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_055 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
250 260 270 280 290 300
310 320
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::
NP_055 EEHEGHTEEPEAEEQAHEQQPPQQEEY
310 320
>>NP_001137299 (OMIM: 605789,616734) microtubule-associa (315 aa)
initn: 1926 init1: 1926 opt: 1930 Z-score: 1559.4 bits: 296.8 E(85289): 4e-80
Smith-Waterman score: 1930; 91.2% identity (94.1% similar) in 320 aa overlap (8-327:1-315)
10 20 30 40 50 60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
.. : ... . : :.. : :: ::::::::::::::::::::
NP_001 MKQNRDQKCPVSQRNSSFQQPGRKPGCS-----SWGMAVNVYSTSITQETMSR
10 20 30 40
70 80 90 100 110 120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_001 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
230 240 250 260 270 280
310 320
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::
NP_001 EEHEGHTEEPEAEEQAHEQQPPQQEEY
290 300 310
>>NP_001137298 (OMIM: 605789,616734) microtubule-associa (284 aa)
initn: 1898 init1: 1898 opt: 1898 Z-score: 1534.4 bits: 292.0 E(85289): 1e-78
Smith-Waterman score: 1898; 99.6% identity (100.0% similar) in 284 aa overlap (44-327:1-284)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
::::::::::::::::::::::::::::::
NP_001 MAVNVYSTSITQETMSRHDIIAWVNDIVSL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDLETQVIQLNEQVHS
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDLETQVIQLNEQVHS
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE0 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
220 230 240 250 260 270
320
pF1KE0 EQAHEQQPPQQEEY
::::::::::::::
NP_001 EQAHEQQPPQQEEY
280
>>NP_001243349 (OMIM: 605789,616734) microtubule-associa (274 aa)
initn: 1646 init1: 1646 opt: 1646 Z-score: 1332.9 bits: 254.7 E(85289): 1.7e-67
Smith-Waterman score: 1646; 99.2% identity (100.0% similar) in 245 aa overlap (83-327:30-274)
60 70 80 90 100 110
pF1KE0 ITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEH
.:::::::::::::::::::::::::::::
NP_001 MARTTTTSSRIITGPSFLSGSTQCAGSVPTGAAYCQFMDMLFPGCISLKKVKFQAKLEH
10 20 30 40 50
120 130 140 150 160 170
pF1KE0 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE0 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGS
120 130 140 150 160 170
240 250 260 270 280 290
pF1KE0 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
180 190 200 210 220 230
300 310 320
pF1KE0 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::::::::::
NP_001 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
240 250 260 270
>>NP_036458 (OMIM: 605788) microtubule-associated protei (281 aa)
initn: 1173 init1: 880 opt: 1142 Z-score: 929.3 bits: 180.0 E(85289): 5e-45
Smith-Waterman score: 1142; 59.2% identity (83.0% similar) in 289 aa overlap (44-327:1-281)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:.:..::::..::::: . :
NP_036 MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
NP_036 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.::.:::: :
NP_036 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAA-KPGSTPSRPSSTKRA----SSSGSASKSDKDLETQVIQLN
: . : ..::.. : .: .: :.. .. :: .. .. ..:...::
NP_036 KLIGTAVPQ----RTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELN
160 170 180 190 200
250 260 270 280 290 300
pF1KE0 EQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTE
.:. .:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.:: . :
NP_036 QQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPE
210 220 230 240 250 260
310 320
pF1KE0 EPEAEEQAHEQQPPQQEEY
. : :: :.:. .:.::
NP_036 DDEIEE--HQQE--DQDEY
270 280
>>NP_001289979 (OMIM: 605788) microtubule-associated pro (281 aa)
initn: 1173 init1: 880 opt: 1142 Z-score: 929.3 bits: 180.0 E(85289): 5e-45
Smith-Waterman score: 1142; 59.2% identity (83.0% similar) in 289 aa overlap (44-327:1-281)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:.:..::::..::::: . :
NP_001 MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
NP_001 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.::.:::: :
NP_001 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAA-KPGSTPSRPSSTKRA----SSSGSASKSDKDLETQVIQLN
: . : ..::.. : .: .: :.. .. :: .. .. ..:...::
NP_001 KLIGTAVPQ----RTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELN
160 170 180 190 200
250 260 270 280 290 300
pF1KE0 EQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTE
.:. .:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.:: . :
NP_001 QQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPE
210 220 230 240 250 260
310 320
pF1KE0 EPEAEEQAHEQQPPQQEEY
. : :: :.:. .:.::
NP_001 DDEIEE--HQQE--DQDEY
270 280
>>NP_036457 (OMIM: 603108) microtubule-associated protei (268 aa)
initn: 1050 init1: 784 opt: 1018 Z-score: 830.4 bits: 161.6 E(85289): 1.6e-39
Smith-Waterman score: 1021; 55.7% identity (79.1% similar) in 282 aa overlap (44-313:1-267)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:....::::..::.:. ..:
NP_036 MAVNVYSTSVTSDNLSRHDMLAWINESLQL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
: ::.::::::::::::::::::: :.:::::::::::::::.:::.:::.::::.:::.
NP_036 NLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::.:::::.::::..:.::::::.:::::::.:::: :::::.. :. .: ::
NP_036 IPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSAS----KSDKDL---ETQVIQ
: : .. ...:.:: ::.:.... .:. ... . . .. .
NP_036 K---------------PLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAE
160 170 180 190
250 260 270 280 290 300
pF1KE0 LNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEE----
: .::. :::..: .::::::::::::.:::.:::. ::: ..::..:::::..:
NP_036 LMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVI
200 210 220 230 240 250
310 320
pF1KE0 -HEGHTEEPEAEEQAHEQQPPQQEEY
:: .: . :
NP_036 PDEGGPQEEQEEY
260
>>XP_011526998 (OMIM: 603108) PREDICTED: microtubule-ass (268 aa)
initn: 1050 init1: 784 opt: 1018 Z-score: 830.4 bits: 161.6 E(85289): 1.6e-39
Smith-Waterman score: 1021; 55.7% identity (79.1% similar) in 282 aa overlap (44-313:1-267)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:....::::..::.:. ..:
XP_011 MAVNVYSTSVTSDNLSRHDMLAWINESLQL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
: ::.::::::::::::::::::: :.:::::::::::::::.:::.:::.::::.:::.
XP_011 NLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::.:::::.::::..:.::::::.:::::::.:::: :::::.. :. .: ::
XP_011 IPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSAS----KSDKDL---ETQVIQ
: : .. ...:.:: ::.:.... .:. ... . . .. .
XP_011 K---------------PLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAE
160 170 180 190
250 260 270 280 290 300
pF1KE0 LNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEE----
: .::. :::..: .::::::::::::.:::.:::. ::: ..::..:::::..:
XP_011 LMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVI
200 210 220 230 240 250
310 320
pF1KE0 -HEGHTEEPEAEEQAHEQQPPQQEEY
:: .: . :
XP_011 PDEGGPQEEQEEY
260
>>XP_011531002 (OMIM: 605788) PREDICTED: microtubule-ass (266 aa)
initn: 1130 init1: 837 opt: 849 Z-score: 695.1 bits: 136.6 E(85289): 5.6e-32
Smith-Waterman score: 1097; 57.4% identity (82.0% similar) in 284 aa overlap (44-327:1-266)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:.:..::::..::::: . :
XP_011 MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
XP_011 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.: .:.
XP_011 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNP------VPQ
100 110 120 130 140
200 210 220 230 240 250
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDLETQVIQLNEQVHS
.. :::. .. . . .: : .. . :: .. .. ..:...::.:. .
XP_011 RT----SPTGPKNMQTSGRLSNVAP--PCILRK--NPPSARNGGHETDAQILELNQQLVD
150 160 170 180 190
260 270 280 290 300 310
pF1KE0 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.:: . :. : :
XP_011 LKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIE
200 210 220 230 240 250
320
pF1KE0 EQAHEQQPPQQEEY
: :.:. .:.::
XP_011 E--HQQE--DQDEY
260
>>XP_016859086 (OMIM: 605788) PREDICTED: microtubule-ass (266 aa)
initn: 1130 init1: 837 opt: 849 Z-score: 695.1 bits: 136.6 E(85289): 5.6e-32
Smith-Waterman score: 1097; 57.4% identity (82.0% similar) in 284 aa overlap (44-327:1-266)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:.:..::::..::::: . :
XP_016 MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
XP_016 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.: .:.
XP_016 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNP------VPQ
100 110 120 130 140
200 210 220 230 240 250
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDLETQVIQLNEQVHS
.. :::. .. . . .: : .. . :: .. .. ..:...::.:. .
XP_016 RT----SPTGPKNMQTSGRLSNVAP--PCILRK--NPPSARNGGHETDAQILELNQQLVD
150 160 170 180 190
260 270 280 290 300 310
pF1KE0 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.:: . :. : :
XP_016 LKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIE
200 210 220 230 240 250
320
pF1KE0 EQAHEQQPPQQEEY
: :.:. .:.::
XP_016 E--HQQE--DQDEY
260
327 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:01:01 2016 done: Fri Nov 4 02:01:02 2016
Total Scan time: 9.140 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]