Result of FASTA (omim) for
pFN21AB6473
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6473, 325 aa
1>>>pF1KB6473 325 - 325 aa - 325 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0148+/-0.000486; mu= 9.3674+/- 0.030
mean_var=237.5746+/-54.988, 0's: 0 Z-trim(115.9): 395 B-trim: 0 in 0/50
Lambda= 0.083210
statistics sampled from 26186 (26606) to 26186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.312), width: 16
Scan time: 5.980
The best scores are: opt bits E(85289)
NP_001180417 (OMIM: 602567) LIM and senescent cell ( 325) 2418 303.5 4e-82
NP_004978 (OMIM: 602567) LIM and senescent cell an ( 325) 2418 303.5 4e-82
NP_001180411 (OMIM: 602567) LIM and senescent cell ( 329) 2418 303.5 4e-82
NP_001180412 (OMIM: 602567) LIM and senescent cell ( 337) 2418 303.5 4.1e-82
NP_001180413 (OMIM: 602567) LIM and senescent cell ( 362) 2418 303.5 4.2e-82
NP_001180414 (OMIM: 602567) LIM and senescent cell ( 387) 2418 303.6 4.4e-82
XP_005264008 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2318 291.5 1.7e-78
XP_005264007 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2318 291.5 1.7e-78
XP_005264006 (OMIM: 602567) PREDICTED: LIM and sen ( 348) 2318 291.5 1.7e-78
XP_005264005 (OMIM: 602567) PREDICTED: LIM and sen ( 373) 2318 291.6 1.8e-78
XP_005264003 (OMIM: 602567) PREDICTED: LIM and sen ( 398) 2318 291.6 1.8e-78
NP_001154876 (OMIM: 607908,616827) LIM and senesce ( 336) 2152 271.6 1.7e-72
NP_001154875 (OMIM: 607908,616827) LIM and senesce ( 341) 2152 271.6 1.7e-72
NP_001129509 (OMIM: 607908,616827) LIM and senesce ( 363) 2152 271.6 1.7e-72
NP_060450 (OMIM: 607908,616827) LIM and senescent ( 365) 2152 271.6 1.7e-72
XP_016859583 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859581 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859582 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_016859580 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1951 247.4 2.9e-65
XP_005263767 (OMIM: 607908,616827) PREDICTED: LIM ( 272) 1755 223.8 3.3e-58
XP_006712690 (OMIM: 607908,616827) PREDICTED: LIM ( 225) 1447 186.7 3.9e-47
NP_001243471 (OMIM: 607908,616827) LIM and senesce ( 189) 1201 157.1 2.8e-38
XP_011509755 (OMIM: 607908,616827) PREDICTED: LIM ( 324) 1068 141.4 2.4e-33
XP_006712691 (OMIM: 607908,616827) PREDICTED: LIM ( 190) 716 98.8 9.3e-21
XP_006718813 (OMIM: 605390) PREDICTED: leupaxin is ( 290) 514 74.8 2.4e-13
NP_001294880 (OMIM: 605390) leupaxin isoform 3 [Ho ( 366) 514 75.0 2.7e-13
XP_011543693 (OMIM: 605390) PREDICTED: leupaxin is ( 366) 514 75.0 2.7e-13
XP_011543690 (OMIM: 605390) PREDICTED: leupaxin is ( 366) 514 75.0 2.7e-13
XP_011543692 (OMIM: 605390) PREDICTED: leupaxin is ( 366) 514 75.0 2.7e-13
NP_004802 (OMIM: 605390) leupaxin isoform 2 [Homo ( 386) 514 75.0 2.8e-13
NP_001137467 (OMIM: 605390) leupaxin isoform 1 [Ho ( 391) 514 75.0 2.8e-13
XP_016859958 (OMIM: 607908,616827) PREDICTED: LIM ( 238) 500 73.0 6.8e-13
NP_001243354 (OMIM: 605904) PDZ and LIM domain pro ( 271) 462 68.6 1.7e-11
XP_011533001 (OMIM: 605903) PREDICTED: PDZ and LIM ( 309) 462 68.6 1.9e-11
XP_011533000 (OMIM: 605903) PREDICTED: PDZ and LIM ( 364) 462 68.7 2.1e-11
NP_976227 (OMIM: 605903) PDZ and LIM domain protei ( 423) 462 68.8 2.2e-11
NP_005442 (OMIM: 605903) PDZ and LIM domain protei ( 457) 462 68.9 2.3e-11
NP_001243357 (OMIM: 605904) PDZ and LIM domain pro ( 474) 462 68.9 2.4e-11
NP_001011513 (OMIM: 605904) PDZ and LIM domain pro ( 487) 462 68.9 2.4e-11
XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM ( 493) 462 68.9 2.4e-11
XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM ( 498) 462 68.9 2.5e-11
NP_006448 (OMIM: 605904) PDZ and LIM domain protei ( 596) 462 69.0 2.7e-11
XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM ( 600) 462 69.0 2.7e-11
XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM ( 602) 462 69.0 2.8e-11
XP_006714133 (OMIM: 605904) PREDICTED: PDZ and LIM ( 605) 462 69.0 2.8e-11
XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM ( 607) 462 69.0 2.8e-11
XP_005262753 (OMIM: 605904) PREDICTED: PDZ and LIM ( 619) 462 69.1 2.8e-11
NP_001243355 (OMIM: 605904) PDZ and LIM domain pro ( 625) 462 69.1 2.8e-11
XP_006714131 (OMIM: 605904) PREDICTED: PDZ and LIM ( 630) 462 69.1 2.8e-11
XP_005262752 (OMIM: 605904) PREDICTED: PDZ and LIM ( 728) 462 69.2 3.1e-11
>>NP_001180417 (OMIM: 602567) LIM and senescent cell ant (325 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1595.4 bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
250 260 270 280 290 300
310 320
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::
NP_001 KKCYEKFPLELKKRLKKLAETLGRK
310 320
>>NP_004978 (OMIM: 602567) LIM and senescent cell antige (325 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1595.4 bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
250 260 270 280 290 300
310 320
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::
NP_004 KKCYEKFPLELKKRLKKLAETLGRK
310 320
>>NP_001180411 (OMIM: 602567) LIM and senescent cell ant (329 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1595.4 bits: 303.5 E(85289): 4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:5-329)
10 20 30 40 50
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTCNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 GELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 LAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDM
250 260 270 280 290 300
300 310 320
pF1KB6 KPVCKKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::::::
NP_001 KPVCKKCYEKFPLELKKRLKKLAETLGRK
310 320
>>NP_001180412 (OMIM: 602567) LIM and senescent cell ant (337 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1595.3 bits: 303.5 E(85289): 4.1e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:13-337)
10 20 30 40
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGVAAGMTHSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
250 260 270 280 290 300
290 300 310 320
pF1KB6 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::::::::::::::
NP_001 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
310 320 330
>>NP_001180413 (OMIM: 602567) LIM and senescent cell ant (362 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1595.0 bits: 303.5 E(85289): 4.2e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:38-362)
10 20 30
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGEL
::::::::::::::::::::::::::::::
NP_001 ELSHSGLYRRRRDRPDSLRVNGLPEEELSNMANALASATCERCKGGFAPAEKIVNSNGEL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
250 260 270 280 290 300
280 290 300 310 320
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
310 320 330 340 350 360
>>NP_001180414 (OMIM: 602567) LIM and senescent cell ant (387 aa)
initn: 2418 init1: 2418 opt: 2418 Z-score: 1594.6 bits: 303.6 E(85289): 4.4e-82
Smith-Waterman score: 2418; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:63-387)
10 20 30
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGEL
::::::::::::::::::::::::::::::
NP_001 EDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAEKIVNSNGEL
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
280 290 300 310 320 330
280 290 300 310 320
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
340 350 360 370 380
>>XP_005264008 (OMIM: 602567) PREDICTED: LIM and senesce (336 aa)
initn: 2758 init1: 2318 opt: 2318 Z-score: 1530.4 bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
::::::::::::::::::::::::::::::::::::::::::::::::.::::.:.::::
XP_005 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVC
250 260 270 280 290 300
310 320
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
:.::::.: :.:.:: :
XP_005 KHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
310 320 330
>>XP_005264007 (OMIM: 602567) PREDICTED: LIM and senesce (336 aa)
initn: 2758 init1: 2318 opt: 2318 Z-score: 1530.4 bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
::::::::::::::::::::::::::::::::::::::::::::::::.::::.:.::::
XP_005 ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVC
250 260 270 280 290 300
310 320
pF1KB6 KKCYEKFPLELKKRLKKLAETLGRK
:.::::.: :.:.:: :
XP_005 KHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
310 320 330
>>XP_005264006 (OMIM: 602567) PREDICTED: LIM and senesce (348 aa)
initn: 2758 init1: 2318 opt: 2318 Z-score: 1530.3 bits: 291.5 E(85289): 1.7e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:13-329)
10 20 30 40
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLGVAAGMTHSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
250 260 270 280 290 300
290 300 310 320
pF1KB6 NKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
.::::.:.:::::.::::.: :.:.:: :
XP_005 DKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
310 320 330 340
>>XP_005264005 (OMIM: 602567) PREDICTED: LIM and senesce (373 aa)
initn: 2758 init1: 2318 opt: 2318 Z-score: 1529.9 bits: 291.6 E(85289): 1.8e-78
Smith-Waterman score: 2318; 97.2% identity (99.4% similar) in 317 aa overlap (1-317:38-354)
10 20 30
pF1KB6 MANALASATCERCKGGFAPAEKIVNSNGEL
::::::::::::::::::::::::::::::
XP_005 ELSHSGLYRRRRDRPDSLRVNGLPEEELSNMANALASATCERCKGGFAPAEKIVNSNGEL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSW
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKA
250 260 270 280 290 300
280 290 300 310 320
pF1KB6 WCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
::::::::::::::::::.::::.:.:::::.::::.: :.:.:: :
XP_005 WCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKK
310 320 330 340 350 360
XP_005 KKPVCL
370
325 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:06:01 2016 done: Fri Nov 4 23:06:02 2016
Total Scan time: 5.980 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]