FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0166, 2209 aa 1>>>pF1KA0166 2209 - 2209 aa - 2209 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4255+/-0.00141; mu= 18.7433+/- 0.085 mean_var=67.3267+/-13.265, 0's: 0 Z-trim(98.1): 43 B-trim: 0 in 0/50 Lambda= 0.156308 statistics sampled from 5239 (5251) to 5239 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.485), E-opt: 0.2 (0.161), width: 16 Scan time: 6.620 The best scores are: opt bits E(32554) CCDS45002.1 KNTC1 gene_id:9735|Hs108|chr12 (2209) 14318 3239.1 0 >>CCDS45002.1 KNTC1 gene_id:9735|Hs108|chr12 (2209 aa) initn: 14318 init1: 14318 opt: 14318 Z-score: 17430.8 bits: 3239.1 E(32554): 0 Smith-Waterman score: 14318; 100.0% identity (100.0% similar) in 2209 aa overlap (1-2209:1-2209) 10 20 30 40 50 60 pF1KA0 MWNDIELLTNDDTGSGYLSVGSRKEHGTALYQVDLLVKISSEKASLNPKIQACSLSDGFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MWNDIELLTNDDTGSGYLSVGSRKEHGTALYQVDLLVKISSEKASLNPKIQACSLSDGFI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 IVADQSVILLDSICRSLQLHLVFDTEVDVVGLCQEGKFLLVGERSGNLHLIHVTSKQTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IVADQSVILLDSICRSLQLHLVFDTEVDVVGLCQEGKFLLVGERSGNLHLIHVTSKQTLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 TNAFVQKANDENRRTYQNLVIEKDGSNEGTYYMLLLTYSGFFCITNLQLLKIQQAIENVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TNAFVQKANDENRRTYQNLVIEKDGSNEGTYYMLLLTYSGFFCITNLQLLKIQQAIENVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 FSTAKKLQGQIKSSFISTENYHTLGCLSLVAGDLASEVPVIIGGTGNCAFSKWEPDSSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FSTAKKLQGQIKSSFISTENYHTLGCLSLVAGDLASEVPVIIGGTGNCAFSKWEPDSSKK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 GMTVKNLIDAEIIKGAKKFQLIDNLLFVLDTDNVLSLWDIYTLTPVWNWPSLHVEEFLLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GMTVKNLIDAEIIKGAKKFQLIDNLLFVLDTDNVLSLWDIYTLTPVWNWPSLHVEEFLLT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 TEADSPSSVTWQGITNLKLIALTASANKKMKNLMVYSLPTMEILYSLEVSSVSSLVQTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TEADSPSSVTWQGITNLKLIALTASANKKMKNLMVYSLPTMEILYSLEVSSVSSLVQTGI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 STDTIYLLEGVCKNDPKLSEDSVSVLVLRCLTEALPENRLSRLLHKHRFAEAESFAIQFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 STDTIYLLEGVCKNDPKLSEDSVSVLVLRCLTEALPENRLSRLLHKHRFAEAESFAIQFG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 LDVELVYKVKSNHILEKLALSSVDASEQTEWQQLVDDAKENLHKIQDDEFVVNYCLKAQW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LDVELVYKVKSNHILEKLALSSVDASEQTEWQQLVDDAKENLHKIQDDEFVVNYCLKAQW 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 ITYETTQEMLNYAKTRLLKKEDKTALIYSDGLKEVLRAHAKLTTFYGAFGPEKFSGSSWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ITYETTQEMLNYAKTRLLKKEDKTALIYSDGLKEVLRAHAKLTTFYGAFGPEKFSGSSWI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 EFLNNEDDLKDIFLQLKEGNLVCAQYLWLRHRANFESRFDVKMLESLLNSMSASVSLQKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EFLNNEDDLKDIFLQLKEGNLVCAQYLWLRHRANFESRFDVKMLESLLNSMSASVSLQKL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 CPWFKNDVIPFVRRTVPEGQIILAKWLEQAARNLELTDKANWPENGLQLAEIFFTAEKTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 CPWFKNDVIPFVRRTVPEGQIILAKWLEQAARNLELTDKANWPENGLQLAEIFFTAEKTD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 ELGLASSWHWISLKDYQNTEEVCQLRTLVNNLRELITLHRKYNCKLALSDFEKENTTTIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ELGLASSWHWISLKDYQNTEEVCQLRTLVNNLRELITLHRKYNCKLALSDFEKENTTTIV 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 FRMFDKVLAPELIPSILEKFIRVYMREHDLQEEELLLLYIEDLLNRCSSKSTSLFETAWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FRMFDKVLAPELIPSILEKFIRVYMREHDLQEEELLLLYIEDLLNRCSSKSTSLFETAWE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 AKAMAVIACLSDTDLIFDAVLKIMYAAVVPWSAAVEQLVKQHLEMDHPKVKLLQESYKLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AKAMAVIACLSDTDLIFDAVLKIMYAAVVPWSAAVEQLVKQHLEMDHPKVKLLQESYKLM 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 EMKKLLRGYGIREVNLLNKEIMRVVRYILKQDVPSSLEDALKVAQAFMLSDDEIYSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EMKKLLRGYGIREVNLLNKEIMRVVRYILKQDVPSSLEDALKVAQAFMLSDDEIYSLRII 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 DLIDREQGEDCLLLLKSLPPAEAEKTAERVIIWARLALQEEPDHSKEGKAWRMSVAKTSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DLIDREQGEDCLLLLKSLPPAEAEKTAERVIIWARLALQEEPDHSKEGKAWRMSVAKTSV 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA0 DILKILCDIQKDNLQKKDECEEMLKLFKEVASLQENFEVFLSFEDYSNSSLVADLREQHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DILKILCDIQKDNLQKKDECEEMLKLFKEVASLQENFEVFLSFEDYSNSSLVADLREQHI 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA0 KAHEVAQAKHKPGSTPEPIAAEVRSPSMESKLHRQALALQMSKQELEAELTLRALKDGNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KAHEVAQAKHKPGSTPEPIAAEVRSPSMESKLHRQALALQMSKQELEAELTLRALKDGNI 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA0 KTALKKCSDLFKYHCNADTGKLLFLTCQKLCQMLADNVPVTVPVGLNLPSMIHDLASQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KTALKKCSDLFKYHCNADTGKLLFLTCQKLCQMLADNVPVTVPVGLNLPSMIHDLASQAA 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA0 TICSPDFLLDALELCKHTLMAVELSRQCQMDDCGILMKASFGTHKDPYEEWSYSDFFSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TICSPDFLLDALELCKHTLMAVELSRQCQMDDCGILMKASFGTHKDPYEEWSYSDFFSED 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KA0 GIVLESQMVLPVIYELISSLVPLAESKRYPLESTSLPYCSLNEGDGLVLPVINSISALLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GIVLESQMVLPVIYELISSLVPLAESKRYPLESTSLPYCSLNEGDGLVLPVINSISALLQ 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KA0 NLQESSQWELALRFVVGSFGTCLQHSVSNFMNATLSEKLFGETTLVKSRHVVMELKEKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 NLQESSQWELALRFVVGSFGTCLQHSVSNFMNATLSEKLFGETTLVKSRHVVMELKEKAV 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KA0 IFIRENATTLLHKVFNCRLVDLDLALGYCTLLPQKDVFENLWKLIDKAWQNYDKILAISL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IFIRENATTLLHKVFNCRLVDLDLALGYCTLLPQKDVFENLWKLIDKAWQNYDKILAISL 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KA0 VGSELASLYQEIEMGLKFRELSTDAQWGIRLGKLGISFQPVFRQHFLTKKDLIKALVENI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VGSELASLYQEIEMGLKFRELSTDAQWGIRLGKLGISFQPVFRQHFLTKKDLIKALVENI 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KA0 DMDTSLILEYCSTFQLDCDAVLQLFIETLLHNTNAGQGQGDASMDSAKRRHPKLLAKALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DMDTSLILEYCSTFQLDCDAVLQLFIETLLHNTNAGQGQGDASMDSAKRRHPKLLAKALE 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KA0 MVPLLTSTKDLVISLSGILHKLDPYDYEMIEVVLKVIERADEKITNININQALSILKHLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MVPLLTSTKDLVISLSGILHKLDPYDYEMIEVVLKVIERADEKITNININQALSILKHLK 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KA0 SYRRISPPVDLEYQYMLEHVITLPSAAQTRLPFHLIFFGTAQNFWKILSTELSEESFPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SYRRISPPVDLEYQYMLEHVITLPSAAQTRLPFHLIFFGTAQNFWKILSTELSEESFPTL 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KA0 LLISKLMKFSLDTLYVSTAKHVFEKKLKPKLLKLTQAKSSTLINKEITKITQTIESCLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LLISKLMKFSLDTLYVSTAKHVFEKKLKPKLLKLTQAKSSTLINKEITKITQTIESCLLS 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KA0 IVNPEWAVAIAISLAQDIPEGSFKISALKFCLYLAERWLQNIPSQDEKREKAEALLKKLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IVNPEWAVAIAISLAQDIPEGSFKISALKFCLYLAERWLQNIPSQDEKREKAEALLKKLH 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KA0 IQYRRSGTEAVLIAHKLNTEEYLRVIGKPAHLIVSLYEHPSINQRIQNSSGTDYPDIHAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IQYRRSGTEAVLIAHKLNTEEYLRVIGKPAHLIVSLYEHPSINQRIQNSSGTDYPDIHAA 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KA0 AKEIAEVNEINLEKVWDMLLEKWLCPSTKPGEKPSELFELQEDEALRRVQYLLLSRPIDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AKEIAEVNEINLEKVWDMLLEKWLCPSTKPGEKPSELFELQEDEALRRVQYLLLSRPIDY 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 pF1KA0 SSRMLFVFATSTTTTLGMHQLTFAHRTRALQCLFYLADKETIESLFKKPIEEVKSYLRCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSRMLFVFATSTTTTLGMHQLTFAHRTRALQCLFYLADKETIESLFKKPIEEVKSYLRCI 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 pF1KA0 TFLASFETLNIPITYELFCSSPKEGMIKGLWKNHSHESMAVRLVTELCLEYKIYDLQLWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TFLASFETLNIPITYELFCSSPKEGMIKGLWKNHSHESMAVRLVTELCLEYKIYDLQLWN 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 pF1KA0 GLLQKLLGFNMIPYLRKVLKAISSIHSLWQVPYFSKAWQRVIQIPLLSASCPLSPDQLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GLLQKLLGFNMIPYLRKVLKAISSIHSLWQVPYFSKAWQRVIQIPLLSASCPLSPDQLSD 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 pF1KA0 CSESLIAVLECPVSGDLDLIGVARQYIQLELPAFALACLMLMPHSEKRHQQIKNFLGSCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 CSESLIAVLECPVSGDLDLIGVARQYIQLELPAFALACLMLMPHSEKRHQQIKNFLGSCD 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 pF1KA0 PQVILKQLEEHMNTGQLAGFSHQIRSLILNNIINKKEFGILAKTKYFQMLKMHAMNTNNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PQVILKQLEEHMNTGQLAGFSHQIRSLILNNIINKKEFGILAKTKYFQMLKMHAMNTNNI 2110 2120 2130 2140 2150 2160 2170 2180 2190 2200 pF1KA0 TELVNYLANDLSLDEASVLITEYSKHCGKPVPPDTAPCEILKMFLSGLS ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TELVNYLANDLSLDEASVLITEYSKHCGKPVPPDTAPCEILKMFLSGLS 2170 2180 2190 2200 2209 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:45:45 2016 done: Tue Nov 8 10:45:46 2016 Total Scan time: 6.620 Total Display time: 0.260 Function used was FASTA [36.3.4 Apr, 2011]