FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3286, 733 aa 1>>>pF1KE3286 733 - 733 aa - 733 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.7477+/-0.00119; mu= 5.5224+/- 0.072 mean_var=190.8299+/-38.527, 0's: 0 Z-trim(108.6): 32 B-trim: 2 in 1/50 Lambda= 0.092843 statistics sampled from 10313 (10335) to 10313 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.317), width: 16 Scan time: 3.900 The best scores are: opt bits E(32554) CCDS1366.1 TRMT1L gene_id:81627|Hs108|chr1 ( 733) 4885 667.4 2.2e-191 >>CCDS1366.1 TRMT1L gene_id:81627|Hs108|chr1 (733 aa) initn: 4885 init1: 4885 opt: 4885 Z-score: 3549.4 bits: 667.4 E(32554): 2.2e-191 Smith-Waterman score: 4885; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733) 10 20 30 40 50 60 pF1KE3 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 KIQYLIHCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KIQYLIHCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 LKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 TDNYIAQGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TDNYIAQGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQ 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 AGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMS 670 680 690 700 710 720 730 pF1KE3 VNDKAEASGCRRW ::::::::::::: CCDS13 VNDKAEASGCRRW 730 733 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:48:05 2016 done: Mon Nov 7 03:48:06 2016 Total Scan time: 3.900 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]