FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9403, 494 aa 1>>>pF1KE9403 494 - 494 aa - 494 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4984+/-0.00081; mu= 10.3097+/- 0.049 mean_var=234.0949+/-63.105, 0's: 0 Z-trim(114.6): 128 B-trim: 1732 in 2/49 Lambda= 0.083826 statistics sampled from 14999 (15174) to 14999 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.466), width: 16 Scan time: 3.900 The best scores are: opt bits E(32554) CCDS9738.1 GPR135 gene_id:64582|Hs108|chr14 ( 494) 3288 410.6 2e-114 >>CCDS9738.1 GPR135 gene_id:64582|Hs108|chr14 (494 aa) initn: 3288 init1: 3288 opt: 3288 Z-score: 2167.8 bits: 410.6 E(32554): 2e-114 Smith-Waterman score: 3288; 100.0% identity (100.0% similar) in 494 aa overlap (1-494:1-494) 10 20 30 40 50 60 pF1KE9 MEEPQPPRPPASMALLGSQHSGAPSAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MEEPQPPRPPASMALLGSQHSGAPSAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 GGTAAAPGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 GGTAAAPGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 NCAVMGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 NCAVMGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPW 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 RGFCAASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 RGFCAASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 SLPWELLGAPRELAAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 SLPWELLGAPRELAAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 CKTVRLSDVRVRPVNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 CKTVRLSDVRVRPVNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 TMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPSQGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 TMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPSQGP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 GLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEPVTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 GLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEPVTA 430 440 450 460 470 480 490 pF1KE9 VTKQPKSEAGDTSL :::::::::::::: CCDS97 VTKQPKSEAGDTSL 490 494 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:54:15 2016 done: Mon Nov 7 03:54:15 2016 Total Scan time: 3.900 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]