(Linear) (Six-base) MAPSORT of: KIEE9403.seq Check: 3783 from: 1 to: 1482 KIEE9403.orf With 182 enzymes: SgfI * December 27, 2011 16:39 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 114 552 813 954 1482 Size: 114 438 261 141 528 Fragments arranged by size: 528 438 261 141 114 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 317 925 1482 Size: 317 608 557 Fragments arranged by size: 608 557 317 AlwNI CAG_nnn'CTG Cuts at: 0 687 1482 Size: 687 795 ApaI G_GGCC'C Cuts at: 0 536 1037 1258 1383 1482 Size: 536 501 221 125 99 Fragments arranged by size: 536 501 221 125 99 AvaI C'yCGr_G Cuts at: 0 502 739 749 1257 1482 Size: 502 237 10 508 225 Fragments arranged by size: 508 502 237 225 10 AvrII C'CTAG_G Cuts at: 0 1191 1482 Size: 1191 291 BanI G'GyrC_C Cuts at: 0 64 279 513 694 744 1482 Size: 64 215 234 181 50 738 Fragments arranged by size: 738 234 215 181 64 50 BanII G_rGCy'C Cuts at: 0 536 1037 1258 1383 1482 Size: 536 501 221 125 99 Fragments arranged by size: 536 501 221 125 99 BbeI G_GCGC'C Cuts at: 0 68 283 517 698 748 1482 Size: 68 215 234 181 50 734 Fragments arranged by size: 734 234 215 181 68 50 BbsI GAAGACnn'nnnn_ Cuts at: 0 1005 1482 Size: 1005 477 BbvCI CC'TCA_GC Cuts at: 0 1102 1482 Size: 1102 380 BciVI GTATCCnnnnn_n' Cuts at: 0 1464 1482 Size: 1464 18 BglI GCCn_nnn'nGGC Cuts at: 0 89 115 1072 1138 1378 1482 Size: 89 26 957 66 240 104 Fragments arranged by size: 957 240 104 89 66 26 BlpI GC'TnA_GC Cuts at: 0 598 1482 Size: 598 884 Bme1580I G_kGCm'C Cuts at: 0 536 1037 1258 1383 1482 Size: 536 501 221 125 99 Fragments arranged by size: 536 501 221 125 99 BmgBI CAC'GTC Cuts at: 0 924 1368 1482 Size: 924 444 114 Fragments arranged by size: 924 444 114 BmrI ACTGGGnnnn_n' Cuts at: 0 55 1482 Size: 55 1427 Bpu10I CC'TnA_GC Cuts at: 0 163 1102 1482 Size: 163 939 380 Fragments arranged by size: 939 380 163 BsaHI Gr'CG_yC Cuts at: 0 65 280 514 695 745 1482 Size: 65 215 234 181 50 737 Fragments arranged by size: 737 234 215 181 65 50 BsaWI w'CCGG_w Cuts at: 0 791 1217 1482 Size: 791 426 265 Fragments arranged by size: 791 426 265 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 290 320 781 811 1482 Size: 290 30 461 30 671 Fragments arranged by size: 671 461 290 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 19 1090 1222 1482 Size: 19 1071 132 260 Fragments arranged by size: 1071 260 132 19 BseYI C'CCAG_C Cuts at: 0 153 816 1028 1246 1311 1465 1482 Size: 153 663 212 218 65 154 17 Fragments arranged by size: 663 218 212 154 153 65 17 BsiEI CG_ry'CG Cuts at: 0 80 119 146 262 646 666 937 1482 Size: 80 39 27 116 384 20 271 545 Fragments arranged by size: 545 384 271 116 80 39 27 20 BsiHKAI G_wGCw'C Cuts at: 0 125 1482 Size: 125 1357 Bsp1286I G_dGCh'C Cuts at: 0 125 536 1037 1258 1383 1482 Size: 125 411 501 221 125 99 Fragments arranged by size: 501 411 221 125 125 99 BspHI T'CATG_A Cuts at: 0 1004 1482 Size: 1004 478 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 866 1482 Size: 866 616 BsrBI CCG'CTC Cuts at: 0 196 1482 Size: 196 1286 BsrFI r'CCGG_y Cuts at: 0 79 392 936 1307 1428 1482 Size: 79 313 544 371 121 54 Fragments arranged by size: 544 371 313 121 79 54 BssHII G'CGCG_C Cuts at: 0 674 952 1482 Size: 674 278 530 Fragments arranged by size: 674 530 278 BssSI C'ACGA_G Cuts at: 0 573 1482 Size: 573 909 BstBI TT'CG_AA Cuts at: 0 1290 1482 Size: 1290 192 BstXI CCAn_nnnn'nTGG Cuts at: 0 1311 1356 1482 Size: 1311 45 126 Fragments arranged by size: 1311 126 45 BstYI r'GATC_y Cuts at: 0 444 1482 Size: 444 1038 BtgI C'CryG_G Cuts at: 0 74 104 110 137 146 527 649 777 Size: 74 30 6 27 9 381 122 128 Cuts at: 777 1482 Size: 705 Fragments arranged by size: 705 381 128 122 74 30 27 9 6 BtsI GCAGTG_nn' Cuts at: 0 311 1445 1482 Size: 311 1134 37 Fragments arranged by size: 1134 311 37 EaeI y'GGCC_r Cuts at: 0 77 107 116 259 643 663 934 986 Size: 77 30 9 143 384 20 271 52 Cuts at: 986 1058 1112 1346 1370 1482 Size: 72 54 234 24 112 Fragments arranged by size: 384 271 234 143 112 77 72 54 52 30 24 20 9 EagI C'GGCC_G Cuts at: 0 77 116 259 643 663 934 1482 Size: 77 39 143 384 20 271 548 Fragments arranged by size: 548 384 271 143 77 39 20 EarI CTCTTCn'nnn_ Cuts at: 0 496 1341 1482 Size: 496 845 141 Fragments arranged by size: 845 496 141 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 488 1482 Size: 488 994 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 114 552 813 954 1482 Size: 114 438 261 141 528 Fragments arranged by size: 528 438 261 141 114 EcoNI CCTnn'n_nnAGG Cuts at: 0 1323 1482 Size: 1323 159 EcoO109I rG'GnC_Cy Cuts at: 0 532 533 1033 1034 1089 1254 1316 1482 Size: 532 1 500 1 55 165 62 166 Fragments arranged by size: 532 500 166 165 62 55 1 1 FseI GG_CCGG'CC Cuts at: 0 83 1482 Size: 83 1399 FspI TGC'GCA Cuts at: 0 982 1482 Size: 982 500 FspAI rTGC'GCAy Cuts at: 0 982 1482 Size: 982 500 HaeII r_GCGC'y Cuts at: 0 68 154 283 322 460 517 610 698 Size: 68 86 129 39 138 57 93 88 Cuts at: 698 748 1482 Size: 50 734 Fragments arranged by size: 734 138 129 93 88 86 68 57 50 39 KasI G'GCGC_C Cuts at: 0 64 279 513 694 744 1482 Size: 64 215 234 181 50 738 Fragments arranged by size: 738 234 215 181 64 50 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 599 899 1364 1482 Size: 599 300 465 118 Fragments arranged by size: 599 465 300 118 MscI TGG'CCA Cuts at: 0 1372 1482 Size: 1372 110 MslI CAynn'nnrTG Cuts at: 0 1183 1482 Size: 1183 299 MspA1I CmG'CkG Cuts at: 0 76 106 148 190 285 529 651 684 Size: 76 30 42 42 95 244 122 33 Cuts at: 684 816 1352 1482 Size: 132 536 130 Fragments arranged by size: 536 244 132 130 122 95 76 42 42 33 30 NaeI GCC'GGC Cuts at: 0 81 1482 Size: 81 1401 NarI GG'CG_CC Cuts at: 0 65 280 514 695 745 1482 Size: 65 215 234 181 50 737 Fragments arranged by size: 737 234 215 181 65 50 NgoMIV G'CCGG_C Cuts at: 0 79 1482 Size: 79 1403 NotI GC'GGCC_GC Cuts at: 0 259 643 1482 Size: 259 384 839 Fragments arranged by size: 839 384 259 PasI CC'CwG_GG Cuts at: 0 711 728 1482 Size: 711 17 754 Fragments arranged by size: 754 711 17 PfoI T'CCnGG_A Cuts at: 0 482 1482 Size: 482 1000 PspOMI G'GGCC_C Cuts at: 0 532 1033 1254 1379 1482 Size: 532 501 221 125 103 Fragments arranged by size: 532 501 221 125 103 PstI C_TGCA'G Cuts at: 0 306 683 1482 Size: 306 377 799 Fragments arranged by size: 799 377 306 PvuII CAG'CTG Cuts at: 0 190 684 816 1482 Size: 190 494 132 666 Fragments arranged by size: 666 494 190 132 SacII CC_GC'GG Cuts at: 0 77 107 149 530 652 1482 Size: 77 30 42 381 122 830 Fragments arranged by size: 830 381 122 77 42 30 SfcI C'TryA_G Cuts at: 0 302 679 1482 Size: 302 377 803 Fragments arranged by size: 803 377 302 SfiI GGCCn_nnn'nGGCC Cuts at: 0 115 1138 1378 1482 Size: 115 1023 240 104 Fragments arranged by size: 1023 240 115 104 SfoI GGC'GCC Cuts at: 0 66 281 515 696 746 1482 Size: 66 215 234 181 50 736 Fragments arranged by size: 736 234 215 181 66 50 SmaI CCC'GGG Cuts at: 0 504 751 1259 1482 Size: 504 247 508 223 Fragments arranged by size: 508 504 247 223 StyI C'CwwG_G Cuts at: 0 213 354 1191 1482 Size: 213 141 837 291 Fragments arranged by size: 837 291 213 141 TatI w'GTAC_w Cuts at: 0 1398 1482 Size: 1398 84 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 290 322 1482 Size: 290 32 1160 Fragments arranged by size: 1160 290 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 600 1482 Size: 600 882 XmaI C'CCGG_G Cuts at: 0 502 749 1257 1482 Size: 502 247 508 225 Fragments arranged by size: 508 502 247 225 Enzymes that do cut: AcuI AlfI AlwNI ApaI AvaI AvrII BanI BanII BbeI BbsI BbvCI BciVI BglI BlpI Bme1580I BmgBI BmrI Bpu10I BsaHI BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI Bsp1286I BspHI BspMI BsrBI BsrFI BssHII BssSI BstBI BstXI BstYI BtgI BtsI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I FseI FspI FspAI HaeII KasI MmeI MscI MslI MspA1I NaeI NarI NgoMIV NotI PasI PfoI PspOMI PstI PvuII SacII SfcI SfiI SfoI SmaI StyI TatI TstI XcmI XmaI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AfeI AflII AflIII AgeI AhdI AleI AloI ApaLI ApoI AscI AseI AsiSI BaeI BamHI BcgI BclI BfrBI BglII BmtI BplI BpmI BpuEI BsaI BsaAI BsaBI BsgI BsiWI BsmI BsmBI BspEI BsrDI BsrGI BstAPI BstEII BstZ17I Bsu36I BtgZI ClaI CspCI DraI DraIII DrdI EcoICRI EcoRI EcoRV FalI Hin4I HincII HindIII HpaI KpnI MfeI MluI NcoI NdeI NheI NruI NsiI NspI PacI PciI PflMI PmeI PmlI PpiI PpuMI PshAI PsiI PspXI PsrI PvuI RsrII SacI SalI SanDI SapI SbfI ScaI SexAI SgfI SgrAI SmlI SnaBI SpeI SphI SrfI SspI StuI SwaI TaqII Tth111I XbaI XhoI XmnI ZraI