Result of FASTA (ccds) for
pFN21AA0746
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0746, 979 aa
1>>>pF1KA0746 979 - 979 aa - 979 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2634+/-0.000983; mu= 17.2646+/- 0.060
mean_var=86.6716+/-17.065, 0's: 0 Z-trim(106.2): 9 B-trim: 0 in 0/53
Lambda= 0.137764
statistics sampled from 8864 (8871) to 8864 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.273), width: 16
Scan time: 3.090
The best scores are: opt bits E(32554)
CCDS77907.1 SEL1L3 gene_id:23231|Hs108|chr4 ( 979) 6664 1335.1 0
CCDS75113.1 SEL1L3 gene_id:23231|Hs108|chr4 (1097) 6664 1335.1 0
CCDS47037.1 SEL1L3 gene_id:23231|Hs108|chr4 (1132) 6664 1335.1 0
CCDS9876.1 SEL1L gene_id:6400|Hs108|chr14 ( 794) 479 105.7 3.7e-22
CCDS59443.1 SEL1L2 gene_id:80343|Hs108|chr20 ( 575) 393 88.6 4e-17
>>CCDS77907.1 SEL1L3 gene_id:23231|Hs108|chr4 (979 aa)
initn: 6664 init1: 6664 opt: 6664 Z-score: 7153.3 bits: 1335.1 E(32554): 0
Smith-Waterman score: 6664; 100.0% identity (100.0% similar) in 979 aa overlap (1-979:1-979)
10 20 30 40 50 60
pF1KA0 MVYRDDYFIRHSISVSAVIVRAWITHKYSGRDWNVKWEENLLHAVAKNYTLLQTIPPFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MVYRDDYFIRHSISVSAVIVRAWITHKYSGRDWNVKWEENLLHAVAKNYTLLQTIPPFER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 PFKDHQVCLEWNMGYIWNLRANRIPQCPLENDVVALLGFPYASSGENTGIVKKFPRFRNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 PFKDHQVCLEWNMGYIWNLRANRIPQCPLENDVVALLGFPYASSGENTGIVKKFPRFRNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ELEATRRQRMDYPVFTVSLWLYLLHYCKANLCGILYFVDSNEMYGTPSVFLTEEGYLHIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ELEATRRQRMDYPVFTVSLWLYLLHYCKANLCGILYFVDSNEMYGTPSVFLTEEGYLHIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 MHLVKGEDLAVKTKFIIPLKEWFRLDISFNGGQIVVTTSIGQDLKSYHNQTISFREDFHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MHLVKGEDLAVKTKFIIPLKEWFRLDISFNGGQIVVTTSIGQDLKSYHNQTISFREDFHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 NDTAGYFIIGGSRYVAGIEGFFGPLKYYRLRSLHPAQIFNPLLEKQLAEQIKLYYERCAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 NDTAGYFIIGGSRYVAGIEGFFGPLKYYRLRSLHPAQIFNPLLEKQLAEQIKLYYERCAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 VQEIVSVYASAAKHGGERQEACHLHNSYLDLQRRYGRPSMCRAFPWEKELKDKHPSLFQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 VQEIVSVYASAAKHGGERQEACHLHNSYLDLQRRYGRPSMCRAFPWEKELKDKHPSLFQA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 LLEMDLLTVPRNQNESVSEIGGKIFEKAVKRLSSIDGLHQISSIVPFLTDSSCCGYHKAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LLEMDLLTVPRNQNESVSEIGGKIFEKAVKRLSSIDGLHQISSIVPFLTDSSCCGYHKAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 YYLAVFYETGLNVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYPLDWELSYAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YYLAVFYETGLNVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYPLDWELSYAY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 YSNIATKTPLDQHTLQGDQAYVETIRLKDDEILKVQTKEDGDVFMWLKHEATRGNAAAQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YSNIATKTPLDQHTLQGDQAYVETIRLKDDEILKVQTKEDGDVFMWLKHEATRGNAAAQQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 RLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 RLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALEL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 MKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 VPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 VPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGY
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEERPDLARRYLGVNCVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEERPDLARRYLGVNCVW
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 RYYNFSVFQIDAPSFAYLKMGDLYYYGHQNQSQDLELSVQMYAQAALDGDSQGFFNLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 RYYNFSVFQIDAPSFAYLKMGDLYYYGHQNQSQDLELSVQMYAQAALDGDSQGFFNLALL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 IEEGTIIPHHILDFLEIDSTLHSNNISILQELYERCWSHSNEESFSPCSLAWLYLHLRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 IEEGTIIPHHILDFLEIDSTLHSNNISILQELYERCWSHSNEESFSPCSLAWLYLHLRLL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 WGAILHSALIYFLGTFLLSILIAWTVQYFQSVSASDPPPRPSQASPDTATSTASPAVTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 WGAILHSALIYFLGTFLLSILIAWTVQYFQSVSASDPPPRPSQASPDTATSTASPAVTPA
910 920 930 940 950 960
970
pF1KA0 ADASDQDQPTVTNNPEPRG
:::::::::::::::::::
CCDS77 ADASDQDQPTVTNNPEPRG
970
>>CCDS75113.1 SEL1L3 gene_id:23231|Hs108|chr4 (1097 aa)
initn: 6664 init1: 6664 opt: 6664 Z-score: 7152.6 bits: 1335.1 E(32554): 0
Smith-Waterman score: 6664; 100.0% identity (100.0% similar) in 979 aa overlap (1-979:119-1097)
10 20 30
pF1KA0 MVYRDDYFIRHSISVSAVIVRAWITHKYSG
::::::::::::::::::::::::::::::
CCDS75 SIPVYKKRWKNEKHLHTSRTQIVHVKFPSIMVYRDDYFIRHSISVSAVIVRAWITHKYSG
90 100 110 120 130 140
40 50 60 70 80 90
pF1KA0 RDWNVKWEENLLHAVAKNYTLLQTIPPFERPFKDHQVCLEWNMGYIWNLRANRIPQCPLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RDWNVKWEENLLHAVAKNYTLLQTIPPFERPFKDHQVCLEWNMGYIWNLRANRIPQCPLE
150 160 170 180 190 200
100 110 120 130 140 150
pF1KA0 NDVVALLGFPYASSGENTGIVKKFPRFRNRELEATRRQRMDYPVFTVSLWLYLLHYCKAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NDVVALLGFPYASSGENTGIVKKFPRFRNRELEATRRQRMDYPVFTVSLWLYLLHYCKAN
210 220 230 240 250 260
160 170 180 190 200 210
pF1KA0 LCGILYFVDSNEMYGTPSVFLTEEGYLHIQMHLVKGEDLAVKTKFIIPLKEWFRLDISFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LCGILYFVDSNEMYGTPSVFLTEEGYLHIQMHLVKGEDLAVKTKFIIPLKEWFRLDISFN
270 280 290 300 310 320
220 230 240 250 260 270
pF1KA0 GGQIVVTTSIGQDLKSYHNQTISFREDFHYNDTAGYFIIGGSRYVAGIEGFFGPLKYYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GGQIVVTTSIGQDLKSYHNQTISFREDFHYNDTAGYFIIGGSRYVAGIEGFFGPLKYYRL
330 340 350 360 370 380
280 290 300 310 320 330
pF1KA0 RSLHPAQIFNPLLEKQLAEQIKLYYERCAEVQEIVSVYASAAKHGGERQEACHLHNSYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RSLHPAQIFNPLLEKQLAEQIKLYYERCAEVQEIVSVYASAAKHGGERQEACHLHNSYLD
390 400 410 420 430 440
340 350 360 370 380 390
pF1KA0 LQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVK
450 460 470 480 490 500
400 410 420 430 440 450
pF1KA0 RLSSIDGLHQISSIVPFLTDSSCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RLSSIDGLHQISSIVPFLTDSSCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQG
510 520 530 540 550 560
460 470 480 490 500 510
pF1KA0 SERLSSMNLGYKHYQGIDNYPLDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SERLSSMNLGYKHYQGIDNYPLDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD
570 580 590 600 610 620
520 530 540 550 560 570
pF1KA0 EILKVQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EILKVQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALE
630 640 650 660 670 680
580 590 600 610 620 630
pF1KA0 TEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 TEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKA
690 700 710 720 730 740
640 650 660 670 680 690
pF1KA0 AKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSL
750 760 770 780 790 800
700 710 720 730 740 750
pF1KA0 YYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAET
810 820 830 840 850 860
760 770 780 790 800 810
pF1KA0 GIEVSQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYYYGHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GIEVSQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYYYGHQN
870 880 890 900 910 920
820 830 840 850 860 870
pF1KA0 QSQDLELSVQMYAQAALDGDSQGFFNLALLIEEGTIIPHHILDFLEIDSTLHSNNISILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QSQDLELSVQMYAQAALDGDSQGFFNLALLIEEGTIIPHHILDFLEIDSTLHSNNISILQ
930 940 950 960 970 980
880 890 900 910 920 930
pF1KA0 ELYERCWSHSNEESFSPCSLAWLYLHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ELYERCWSHSNEESFSPCSLAWLYLHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYFQ
990 1000 1010 1020 1030 1040
940 950 960 970
pF1KA0 SVSASDPPPRPSQASPDTATSTASPAVTPAADASDQDQPTVTNNPEPRG
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SVSASDPPPRPSQASPDTATSTASPAVTPAADASDQDQPTVTNNPEPRG
1050 1060 1070 1080 1090
>>CCDS47037.1 SEL1L3 gene_id:23231|Hs108|chr4 (1132 aa)
initn: 6664 init1: 6664 opt: 6664 Z-score: 7152.4 bits: 1335.1 E(32554): 0
Smith-Waterman score: 6664; 100.0% identity (100.0% similar) in 979 aa overlap (1-979:154-1132)
10 20 30
pF1KA0 MVYRDDYFIRHSISVSAVIVRAWITHKYSG
::::::::::::::::::::::::::::::
CCDS47 SIPVYKKRWKNEKHLHTSRTQIVHVKFPSIMVYRDDYFIRHSISVSAVIVRAWITHKYSG
130 140 150 160 170 180
40 50 60 70 80 90
pF1KA0 RDWNVKWEENLLHAVAKNYTLLQTIPPFERPFKDHQVCLEWNMGYIWNLRANRIPQCPLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RDWNVKWEENLLHAVAKNYTLLQTIPPFERPFKDHQVCLEWNMGYIWNLRANRIPQCPLE
190 200 210 220 230 240
100 110 120 130 140 150
pF1KA0 NDVVALLGFPYASSGENTGIVKKFPRFRNRELEATRRQRMDYPVFTVSLWLYLLHYCKAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NDVVALLGFPYASSGENTGIVKKFPRFRNRELEATRRQRMDYPVFTVSLWLYLLHYCKAN
250 260 270 280 290 300
160 170 180 190 200 210
pF1KA0 LCGILYFVDSNEMYGTPSVFLTEEGYLHIQMHLVKGEDLAVKTKFIIPLKEWFRLDISFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LCGILYFVDSNEMYGTPSVFLTEEGYLHIQMHLVKGEDLAVKTKFIIPLKEWFRLDISFN
310 320 330 340 350 360
220 230 240 250 260 270
pF1KA0 GGQIVVTTSIGQDLKSYHNQTISFREDFHYNDTAGYFIIGGSRYVAGIEGFFGPLKYYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GGQIVVTTSIGQDLKSYHNQTISFREDFHYNDTAGYFIIGGSRYVAGIEGFFGPLKYYRL
370 380 390 400 410 420
280 290 300 310 320 330
pF1KA0 RSLHPAQIFNPLLEKQLAEQIKLYYERCAEVQEIVSVYASAAKHGGERQEACHLHNSYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RSLHPAQIFNPLLEKQLAEQIKLYYERCAEVQEIVSVYASAAKHGGERQEACHLHNSYLD
430 440 450 460 470 480
340 350 360 370 380 390
pF1KA0 LQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVK
490 500 510 520 530 540
400 410 420 430 440 450
pF1KA0 RLSSIDGLHQISSIVPFLTDSSCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RLSSIDGLHQISSIVPFLTDSSCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQG
550 560 570 580 590 600
460 470 480 490 500 510
pF1KA0 SERLSSMNLGYKHYQGIDNYPLDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SERLSSMNLGYKHYQGIDNYPLDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD
610 620 630 640 650 660
520 530 540 550 560 570
pF1KA0 EILKVQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EILKVQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALE
670 680 690 700 710 720
580 590 600 610 620 630
pF1KA0 TEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKA
730 740 750 760 770 780
640 650 660 670 680 690
pF1KA0 AKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSL
790 800 810 820 830 840
700 710 720 730 740 750
pF1KA0 YYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAET
850 860 870 880 890 900
760 770 780 790 800 810
pF1KA0 GIEVSQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYYYGHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GIEVSQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYYYGHQN
910 920 930 940 950 960
820 830 840 850 860 870
pF1KA0 QSQDLELSVQMYAQAALDGDSQGFFNLALLIEEGTIIPHHILDFLEIDSTLHSNNISILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QSQDLELSVQMYAQAALDGDSQGFFNLALLIEEGTIIPHHILDFLEIDSTLHSNNISILQ
970 980 990 1000 1010 1020
880 890 900 910 920 930
pF1KA0 ELYERCWSHSNEESFSPCSLAWLYLHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELYERCWSHSNEESFSPCSLAWLYLHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYFQ
1030 1040 1050 1060 1070 1080
940 950 960 970
pF1KA0 SVSASDPPPRPSQASPDTATSTASPAVTPAADASDQDQPTVTNNPEPRG
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SVSASDPPPRPSQASPDTATSTASPAVTPAADASDQDQPTVTNNPEPRG
1090 1100 1110 1120 1130
>>CCDS9876.1 SEL1L gene_id:6400|Hs108|chr14 (794 aa)
initn: 205 init1: 80 opt: 479 Z-score: 511.2 bits: 105.7 E(32554): 3.7e-22
Smith-Waterman score: 482; 26.1% identity (54.4% similar) in 597 aa overlap (387-955:220-793)
360 370 380 390 400 410
pF1KA0 LFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVKRLSSI----DGLHQ-ISSIVPFLTDS
::..:.: : : : :.. ..
CCDS98 GMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKL
190 200 210 220 230 240
420 430 440 450 460 470
pF1KA0 SCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYP
. : :.. :. .: .::.: .: ....: :. :.. .. : :::... ::
CCDS98 TEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQ
250 260 270 280 290 300
480 490 500 510 520
pF1KA0 LDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDD-EILKVQTKE-DGDVFMWLKH
. : . ..: .:... : .: : . :. ::: :. : ... . :.... .
CCDS98 -SCESALTHYRLVANHVASDI-SLTGG-SVVQRIRLPDEVENPGMNSGMLEEDLIQYYQF
310 320 330 340 350 360
530 540 550 560 570 580
pF1KA0 EATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQG
: .:.. :: :.:. . : .:: .: . :.... .: .. :. . . ..
CCDS98 LAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI
370 380 390 400 410 420
590 600 610 620 630 640
pF1KA0 VKKNRRLALELMKKAASKGLHQAVNGLGWYY---HKFKKNYAKAAKYWLKAEEMGNPDAS
: .. . ::. .::::. : . .::: : . . :: : ::. :: :.: :..
CCDS98 VPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQ
430 440 450 460 470 480
650 660 670 680 690 700
pF1KA0 YNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEK
.:: .. .:: :: :. : .::. :.::::. . . .. .:. :. .
CCDS98 LQLGSMYYNGI--GVK-RDYKQALKYFNLASQGGHILAFYNLAQMHASGT--GVMRSCHT
490 500 510 520 530 540
710 720 730 740 750 760
pF1KA0 AVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEER
:: :.: :. : .. . . :.: .:... :.. :.: :: : ::.:.: : : ..:
CCDS98 AVELFKNVCER-GRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQR
550 560 570 580 590 600
770 780 790 800 810 820
pF1KA0 PDLARRYLGVNCVWR----YYNFSVFQIDAPSFAYLKMGDLYYYGHQNQSQDLELSVQMY
.: : .. ..: .. : . . : .:.:: ..:: .. : : . :
CCDS98 EA---SIVGENETYPRALLHWNRAASQ--GYTVARIKLGDYHFYGFGTDV-DYETAFIHY
610 620 630 640 650
830 840 850 860 870
pF1KA0 AQAALDGDS-QGFFNLALLIEEGTIIP---HHILDFLEIDSTLHSN-NISILQEL-----
:. . : :..:::. . :.: : : : .. . . .. .. :
CCDS98 RLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLGV
660 670 680 690 700 710
880 890 900 910 920
pF1KA0 --YERCWSHSN-EESFSPCSLAWLYLHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYF
. . ..: .. :. .. : : : : . . .::: .::. .
CCDS98 VYFLQYIRETNIRDMFTQLDMDQL---LGPEWDLYLMTIIALLLGT-----VIAYRQRQH
720 730 740 750 760
930 940 950 960 970
pF1KA0 QSVSASDPP-PRPSQASPDTATSTASPAVTPAADASDQDQPTVTNNPEPRG
:.. : :: :::. . . :
CCDS98 QDMPAPRPPGPRPAPPQQEGPPEQQPPQ
770 780 790
>>CCDS59443.1 SEL1L2 gene_id:80343|Hs108|chr20 (575 aa)
initn: 293 init1: 106 opt: 393 Z-score: 421.0 bits: 88.6 E(32554): 4e-17
Smith-Waterman score: 404; 27.0% identity (60.1% similar) in 363 aa overlap (347-695:100-456)
320 330 340 350 360 370
pF1KA0 ERQEACHLHNSYLDLQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNE-
::.. :. .::. ... . ..:.:
CCDS59 KKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKSQKQKEE
70 80 90 100 110 120
380 390 400 410 420
pF1KA0 ------SVSEIGG-KIFEKAVKRLSSID-GLHQISSIVPFLTDSSCCGYHKASYYLAVFY
.....:. : .:: . : . :...:.. . . . . : ::. :. .
CCDS59 AYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLS
130 140 150 160 170 180
430 440 450 460 470 480
pF1KA0 ETGLNVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYPLDWELSYAYYSNIATK
:... :: ....: :. :.. .:.: :::.. .:: : . :.. .::...:
CCDS59 SYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGI-NVLQNCEVALSYYKKVADY
190 200 210 220 230 240
490 500 510 520 530 540
pF1KA0 TPLDQHTLQGDQAYVETIRLKD-DEILKVQTK-EDGDVFMWLKHEATRGNAAAQQRLAQM
. . ... . :: .:: . : :. ... : :.... : : ::.. : :.:.
CCDS59 --IADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQL
250 260 270 280 290 300
550 560 570 580 590 600
pF1KA0 LFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAA
. :..:. .. :.... :.: :. . . : . .: .: :.. .. ::
CCDS59 HLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAA
310 320 330 340 350 360
610 620 630 640 650 660
pF1KA0 SKGLHQAVNGLGWYYHKFKK---NYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVP
::: ...::: : . : :::.: ::. :: : : :::...:: .. .: :.
CCDS59 SKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSG--SGI-
370 380 390 400 410 420
670 680 690 700 710 720
pF1KA0 GRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLG
.. :: .::. :.:.:. . . . .: ::
CCDS59 WKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVEKRLTFLKKRRCIQWR
430 440 450 460 470 480
730 740 750 760 770 780
pF1KA0 HVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEERPDLARRYLGVNCVWRY
CCDS59 FSYGIELPFKDIHLARRLYDMAAQTSPDAHIPVLFAVMKLETTHLLRDILFFNFTTRWNW
490 500 510 520 530 540
979 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:44:55 2016 done: Sat Nov 5 06:44:55 2016
Total Scan time: 3.090 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]