FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA1417, 1353 aa 1>>>pF1KA1417 1353 - 1353 aa - 1353 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3672+/-0.00126; mu= 13.3181+/- 0.074 mean_var=178.6693+/-37.510, 0's: 0 Z-trim(104.9): 111 B-trim: 53 in 1/50 Lambda= 0.095951 statistics sampled from 8034 (8134) to 8034 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.25), width: 16 Scan time: 4.170 The best scores are: opt bits E(32554) CCDS34490.1 IBTK gene_id:25998|Hs108|chr6 (1353) 9010 1261.7 0 CCDS75486.1 IBTK gene_id:25998|Hs108|chr6 (1338) 6752 949.1 0 >>CCDS34490.1 IBTK gene_id:25998|Hs108|chr6 (1353 aa) initn: 9010 init1: 9010 opt: 9010 Z-score: 6751.7 bits: 1261.7 E(32554): 0 Smith-Waterman score: 9010; 100.0% identity (100.0% similar) in 1353 aa overlap (1-1353:1-1353) 10 20 30 40 50 60 pF1KA1 MSSPMPDCTSKCRSLKHALDVLSVVTKGSENQIKAFLSSHCYNAATIKDVFGRNALHLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSSPMPDCTSKCRSLKHALDVLSVVTKGSENQIKAFLSSHCYNAATIKDVFGRNALHLVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA1 SCGKKGVLDWLIQKGVDLLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SCGKKGVLDWLIQKGVDLLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA1 SALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA1 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA1 TVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA1 REAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 REAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA1 IYLLADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IYLLADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA1 RSVNSSLKQCRWAYPRQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RSVNSSLKQCRWAYPRQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA1 LHNSSSDVSYVSDINSVYERIRLEKLTFAHRAVSVSTDPSGCNFAILQSDPKTSLYEIPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LHNSSSDVSYVSDINSVYERIRLEKLTFAHRAVSVSTDPSGCNFAILQSDPKTSLYEIPA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA1 VSSSSFFEEFGKLLREADEMDSIHDVTFQVGNRLFPAHKYILAVHSDFFQKLFLSDGNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VSSSSFFEEFGKLLREADEMDSIHDVTFQVGNRLFPAHKYILAVHSDFFQKLFLSDGNTS 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA1 EFTDIYQKDEDSAGCHLFVVEKVHPDMFEYLLQFIYTDTCDFLTHGFKPRIHLNKNPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EFTDIYQKDEDSAGCHLFVVEKVHPDMFEYLLQFIYTDTCDFLTHGFKPRIHLNKNPEEY 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA1 QGTLNSHLNKVNFHEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKKGKNIREDDPVRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QGTLNSHLNKVNFHEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKKGKNIREDDPVRML 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA1 QTVAKKFDFSNLSSRLDGVRFENEKINVIAKNTGNKLKLSQKKCSFLCDVTMKSVDGKEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QTVAKKFDFSNLSSRLDGVRFENEKINVIAKNTGNKLKLSQKKCSFLCDVTMKSVDGKEF 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA1 PCHKCVLCARLEYFHSMLSSSWIEASSCAALEMPIHSDILKVILDYLYTDEAVVIKESQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PCHKCVLCARLEYFHSMLSSSWIEASSCAALEMPIHSDILKVILDYLYTDEAVVIKESQN 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA1 VDFICSVLVVADQLLITRLKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VDFICSVLVVADQLLITRLKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIG 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA1 LNMAALLEARSLDVLSDGVLKDLSEFYRKMIPAMDRRVITPYQDGPDISYLEVEDGDIFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LNMAALLEARSLDVLSDGVLKDLSEFYRKMIPAMDRRVITPYQDGPDISYLEVEDGDIFL 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA1 KEEINMEQNHSETMFKKAKTKAKKKPRKRSDSSGGYNLSDIIQSPSSTGLLKSGKTNSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KEEINMEQNHSETMFKKAKTKAKKKPRKRSDSSGGYNLSDIIQSPSSTGLLKSGKTNSVE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA1 SLPELLTSDSEGSYAGVGSPRDLQSPDFTTGFHSDKIEAKVKPYVNGTSPVYSREDLKPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SLPELLTSDSEGSYAGVGSPRDLQSPDFTTGFHSDKIEAKVKPYVNGTSPVYSREDLKPW 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA1 EKSPILKISAPQPIPSNRIDTTSSASWVAGSFSPVSPPVVDLRTIMEIEESRQKCGATPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EKSPILKISAPQPIPSNRIDTTSSASWVAGSFSPVSPPVVDLRTIMEIEESRQKCGATPK 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA1 SHLGKTVSHGVKLSQKQRKMIALTTKENNSGMNSMETVLFTPSKAPKPVNAWASSLHSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SHLGKTVSHGVKLSQKQRKMIALTTKENNSGMNSMETVLFTPSKAPKPVNAWASSLHSVS 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KA1 SKSFRDFLLEEKKSVTSHSSGDHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SKSFRDFLLEEKKSVTSHSSGDHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KA1 LLDSPNPWLSSSVTAPSMVAPVTFASIVEEELQQEAALIRSREKPLALIQIEEHAIQDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LLDSPNPWLSSSVTAPSMVAPVTFASIVEEELQQEAALIRSREKPLALIQIEEHAIQDLL 1270 1280 1290 1300 1310 1320 1330 1340 1350 pF1KA1 VFYEAFGNPEEFVIVERTPQGPLAVPMWNKHGC ::::::::::::::::::::::::::::::::: CCDS34 VFYEAFGNPEEFVIVERTPQGPLAVPMWNKHGC 1330 1340 1350 >>CCDS75486.1 IBTK gene_id:25998|Hs108|chr6 (1338 aa) initn: 6752 init1: 6752 opt: 6752 Z-score: 5062.5 bits: 949.1 E(32554): 0 Smith-Waterman score: 8879; 98.9% identity (98.9% similar) in 1353 aa overlap (1-1353:1-1338) 10 20 30 40 50 60 pF1KA1 MSSPMPDCTSKCRSLKHALDVLSVVTKGSENQIKAFLSSHCYNAATIKDVFGRNALHLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MSSPMPDCTSKCRSLKHALDVLSVVTKGSENQIKAFLSSHCYNAATIKDVFGRNALHLVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA1 SCGKKGVLDWLIQKGVDLLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SCGKKGVLDWLIQKGVDLLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA1 SALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA1 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA1 TVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA1 REAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 REAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA1 IYLLADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 IYLLADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA1 RSVNSSLKQCRWAYPRQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RSVNSSLKQCRWAYPRQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA1 LHNSSSDVSYVSDINSVYERIRLEKLTFAHRAVSVSTDPSGCNFAILQSDPKTSLYEIPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LHNSSSDVSYVSDINSVYERIRLEKLTFAHRAVSVSTDPSGCNFAILQSDPKTSLYEIPA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA1 VSSSSFFEEFGKLLREADEMDSIHDVTFQVGNRLFPAHKYILAVHSDFFQKLFLSDGNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VSSSSFFEEFGKLLREADEMDSIHDVTFQVGNRLFPAHKYILAVHSDFFQKLFLSDGNTS 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA1 EFTDIYQKDEDSAGCHLFVVEKVHPDMFEYLLQFIYTDTCDFLTHGFKPRIHLNKNPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EFTDIYQKDEDSAGCHLFVVEKVHPDMFEYLLQFIYTDTCDFLTHGFKPRIHLNKNPEEY 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA1 QGTLNSHLNKVNFHEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKKGKNIREDDPVRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QGTLNSHLNKVNFHEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKKGKNIREDDPVRML 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA1 QTVAKKFDFSNLSSRLDGVRFENEKINVIAKNTGNKLKLSQKKCSFLCDVTMKSVDGKEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QTVAKKFDFSNLSSRLDGVRFENEKINVIAKNTGNKLKLSQKKCSFLCDVTMKSVDGKEF 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA1 PCHKCVLCARLEYFHSMLSSSWIEASSCAALEMPIHSDILKVILDYLYTDEAVVIKESQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PCHKCVLCARLEYFHSMLSSSWIEASSCAALEMPIHSDILKVILDYLYTDEAVVIKESQN 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA1 VDFICSVLVVADQLLITRLKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VDFICSVLVVADQLLITRLKEICEVALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIG 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA1 LNMAALLEARSLDVLSDGVLKDLSEFYRKMIPAMDRRVITPYQDGPDISYLEVEDGDIFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LNMAALLEARSLDVLSDGVLKDLSEFYRKMIPAMDRRVITPYQDGPDISYLEVEDGDIFL 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA1 KEEINMEQNHSETMFKKAKTKAKKKPRKRSDSSGGYNLSDIIQSPSSTGLLKSGKTNSVE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 KEEINMEQNHSETMFKKAKTKAKKKPRKRSDSSGGYNLSDIIQSPSST------------ 970 980 990 1000 1030 1040 1050 1060 1070 1080 pF1KA1 SLPELLTSDSEGSYAGVGSPRDLQSPDFTTGFHSDKIEAKVKPYVNGTSPVYSREDLKPW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 ---ELLTSDSEGSYAGVGSPRDLQSPDFTTGFHSDKIEAKVKPYVNGTSPVYSREDLKPW 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 pF1KA1 EKSPILKISAPQPIPSNRIDTTSSASWVAGSFSPVSPPVVDLRTIMEIEESRQKCGATPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EKSPILKISAPQPIPSNRIDTTSSASWVAGSFSPVSPPVVDLRTIMEIEESRQKCGATPK 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 1190 1200 pF1KA1 SHLGKTVSHGVKLSQKQRKMIALTTKENNSGMNSMETVLFTPSKAPKPVNAWASSLHSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SHLGKTVSHGVKLSQKQRKMIALTTKENNSGMNSMETVLFTPSKAPKPVNAWASSLHSVS 1130 1140 1150 1160 1170 1180 1210 1220 1230 1240 1250 1260 pF1KA1 SKSFRDFLLEEKKSVTSHSSGDHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SKSFRDFLLEEKKSVTSHSSGDHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLP 1190 1200 1210 1220 1230 1240 1270 1280 1290 1300 1310 1320 pF1KA1 LLDSPNPWLSSSVTAPSMVAPVTFASIVEEELQQEAALIRSREKPLALIQIEEHAIQDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LLDSPNPWLSSSVTAPSMVAPVTFASIVEEELQQEAALIRSREKPLALIQIEEHAIQDLL 1250 1260 1270 1280 1290 1300 1330 1340 1350 pF1KA1 VFYEAFGNPEEFVIVERTPQGPLAVPMWNKHGC ::::::::::::::::::::::::::::::::: CCDS75 VFYEAFGNPEEFVIVERTPQGPLAVPMWNKHGC 1310 1320 1330 1353 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 14:37:22 2016 done: Mon Nov 7 14:37:23 2016 Total Scan time: 4.170 Total Display time: 0.140 Function used was FASTA [36.3.4 Apr, 2011]