Result of FASTA (omim) for
pFN21AB6401
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6401, 304 aa
1>>>pF1KB6401 304 - 304 aa - 304 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8219+/-0.00033; mu= 5.2061+/- 0.021
mean_var=145.2423+/-29.622, 0's: 0 Z-trim(120.0): 138 B-trim: 0 in 0/54
Lambda= 0.106421
statistics sampled from 34556 (34711) to 34556 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.407), width: 16
Scan time: 5.640
The best scores are: opt bits E(85289)
NP_057399 (OMIM: 608165) PTB domain-containing eng ( 304) 2054 326.3 4.6e-89
XP_016859795 (OMIM: 608165) PREDICTED: PTB domain- ( 304) 2054 326.3 4.6e-89
NP_001239597 (OMIM: 608165) PTB domain-containing ( 291) 1890 301.1 1.7e-81
XP_006712652 (OMIM: 608165) PREDICTED: PTB domain- ( 322) 1890 301.2 1.8e-81
XP_016859793 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 1348 218.0 2.3e-56
XP_016859794 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 1348 218.0 2.3e-56
XP_016859792 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 1348 218.0 2.3e-56
XP_011509631 (OMIM: 608165) PREDICTED: PTB domain- ( 376) 1348 218.0 2.4e-56
XP_006712648 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_006712645 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_006712646 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_006712647 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_006712644 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_006712643 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 1348 218.0 2.4e-56
XP_016859797 (OMIM: 608165) PREDICTED: PTB domain- ( 258) 1155 188.3 1.4e-47
NP_001239598 (OMIM: 608165) PTB domain-containing ( 201) 1152 187.7 1.6e-47
XP_011509634 (OMIM: 608165) PREDICTED: PTB domain- ( 351) 1140 186.0 9.1e-47
XP_011509633 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 1138 185.7 1.2e-46
XP_011509637 (OMIM: 608165) PREDICTED: PTB domain- ( 276) 991 163.1 5.8e-40
XP_016859796 (OMIM: 608165) PREDICTED: PTB domain- ( 276) 991 163.1 5.8e-40
XP_011509635 (OMIM: 608165) PREDICTED: PTB domain- ( 333) 726 122.4 1.2e-27
NP_001191010 (OMIM: 607815) ankyrin repeat and ste ( 254) 306 57.9 2.5e-08
XP_005269089 (OMIM: 607815) PREDICTED: ankyrin rep ( 266) 306 57.9 2.5e-08
NP_001191009 (OMIM: 607815) ankyrin repeat and ste ( 266) 306 57.9 2.5e-08
NP_001191008 (OMIM: 607815) ankyrin repeat and ste ( 290) 306 57.9 2.7e-08
NP_001190994 (OMIM: 607815) ankyrin repeat and ste ( 290) 306 57.9 2.7e-08
NP_001190995 (OMIM: 607815) ankyrin repeat and ste ( 357) 306 58.0 3.3e-08
NP_001190996 (OMIM: 607815) ankyrin repeat and ste ( 394) 306 58.0 3.5e-08
NP_064525 (OMIM: 607815) ankyrin repeat and steril ( 414) 306 58.0 3.7e-08
XP_016875154 (OMIM: 607815) PREDICTED: ankyrin rep ( 425) 306 58.0 3.8e-08
NP_001190999 (OMIM: 607815) ankyrin repeat and ste ( 426) 306 58.0 3.8e-08
XP_016875153 (OMIM: 607815) PREDICTED: ankyrin rep ( 429) 306 58.0 3.8e-08
NP_001190998 (OMIM: 607815) ankyrin repeat and ste ( 450) 306 58.0 3.9e-08
NP_001190997 (OMIM: 607815) ankyrin repeat and ste ( 460) 306 58.0 4e-08
XP_016875152 (OMIM: 607815) PREDICTED: ankyrin rep ( 476) 306 58.1 4.1e-08
XP_016875151 (OMIM: 607815) PREDICTED: ankyrin rep ( 479) 306 58.1 4.2e-08
XP_016875150 (OMIM: 607815) PREDICTED: ankyrin rep ( 479) 306 58.1 4.2e-08
XP_016875149 (OMIM: 607815) PREDICTED: ankyrin rep ( 486) 306 58.1 4.2e-08
NP_858056 (OMIM: 607815) ankyrin repeat and steril ( 510) 306 58.1 4.4e-08
XP_016875148 (OMIM: 607815) PREDICTED: ankyrin rep ( 511) 306 58.1 4.4e-08
XP_006719577 (OMIM: 607815) PREDICTED: ankyrin rep (1184) 306 58.3 8.8e-08
XP_016875147 (OMIM: 607815) PREDICTED: ankyrin rep (1188) 306 58.3 8.9e-08
XP_006719576 (OMIM: 607815) PREDICTED: ankyrin rep (1199) 306 58.3 8.9e-08
XP_006719575 (OMIM: 607815) PREDICTED: ankyrin rep (1200) 306 58.3 8.9e-08
XP_016875146 (OMIM: 607815) PREDICTED: ankyrin rep (1226) 306 58.3 9.1e-08
XP_006719573 (OMIM: 607815) PREDICTED: ankyrin rep (1235) 306 58.3 9.1e-08
NP_690001 (OMIM: 607815) ankyrin repeat and steril (1248) 306 58.3 9.2e-08
XP_016875145 (OMIM: 607815) PREDICTED: ankyrin rep (1250) 306 58.3 9.2e-08
XP_011536873 (OMIM: 607815) PREDICTED: ankyrin rep (1251) 306 58.3 9.2e-08
XP_005269086 (OMIM: 607815) PREDICTED: ankyrin rep (1256) 306 58.3 9.3e-08
>>NP_057399 (OMIM: 608165) PTB domain-containing engulfm (304 aa)
initn: 2054 init1: 2054 opt: 2054 Z-score: 1719.9 bits: 326.3 E(85289): 4.6e-89
Smith-Waterman score: 2054; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
250 260 270 280 290 300
pF1KB6 DSRC
::::
NP_057 DSRC
>>XP_016859795 (OMIM: 608165) PREDICTED: PTB domain-cont (304 aa)
initn: 2054 init1: 2054 opt: 2054 Z-score: 1719.9 bits: 326.3 E(85289): 4.6e-89
Smith-Waterman score: 2054; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
250 260 270 280 290 300
pF1KB6 DSRC
::::
XP_016 DSRC
>>NP_001239597 (OMIM: 608165) PTB domain-containing engu (291 aa)
initn: 1890 init1: 1890 opt: 1890 Z-score: 1584.1 bits: 301.1 E(85289): 1.7e-81
Smith-Waterman score: 1890; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
:::::::::::::::::::::::::::::::::::::::::
NP_001 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQRQRWRGSKWD
250 260 270 280 290
pF1KB6 DSRC
>>XP_006712652 (OMIM: 608165) PREDICTED: PTB domain-cont (322 aa)
initn: 1890 init1: 1890 opt: 1890 Z-score: 1583.5 bits: 301.2 E(85289): 1.8e-81
Smith-Waterman score: 1890; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPL
:::::::::::::::::::::::::::::::::::::::::
XP_006 PVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQVTILIDWPINDLFHFDMGQ
250 260 270 280 290 300
pF1KB6 DSRC
XP_006 RECYVPKLWFPSIIFAIKTRLK
310 320
>>XP_016859793 (OMIM: 608165) PREDICTED: PTB domain-cont (366 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.9 bits: 218.0 E(85289): 2.3e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_016 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_016 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_016 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQRQRW
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_016 RGSKWD
>>XP_016859794 (OMIM: 608165) PREDICTED: PTB domain-cont (366 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.9 bits: 218.0 E(85289): 2.3e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_016 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_016 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_016 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQRQRW
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_016 RGSKWD
>>XP_016859792 (OMIM: 608165) PREDICTED: PTB domain-cont (366 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.9 bits: 218.0 E(85289): 2.3e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_016 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_016 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_016 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQRQRW
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_016 RGSKWD
>>XP_011509631 (OMIM: 608165) PREDICTED: PTB domain-cont (376 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.7 bits: 218.0 E(85289): 2.4e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_011 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_011 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_011 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQFIYG
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_011 RIQTDTNYMKLIEKRQ
370
>>XP_006712648 (OMIM: 608165) PREDICTED: PTB domain-cont (379 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.7 bits: 218.0 E(85289): 2.4e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_006 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_006 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_006 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_006 MGLTLEGTVFCLDPLDSRC
370
>--
initn: 310 init1: 310 opt: 310 Z-score: 271.4 bits: 58.6 E(85289): 2.2e-08
Smith-Waterman score: 310; 100.0% identity (100.0% similar) in 43 aa overlap (262-304:337-379)
240 250 260 270 280 290
pF1KB6 PTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLE
::::::::::::::::::::::::::::::
XP_006 PTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLE
310 320 330 340 350 360
300
pF1KB6 GTVFCLDPLDSRC
:::::::::::::
XP_006 GTVFCLDPLDSRC
370
>>XP_006712645 (OMIM: 608165) PREDICTED: PTB domain-cont (379 aa)
initn: 1370 init1: 1339 opt: 1348 Z-score: 1132.7 bits: 218.0 E(85289): 2.4e-56
Smith-Waterman score: 1584; 77.7% identity (77.7% similar) in 336 aa overlap (1-261:1-336)
10 20 30 40 50 60
pF1KB6 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETEN
130 140 150 160 170 180
190 200
pF1KB6 MELKNKVQDLENQLRITQVSAPP-------------------------------------
:::::::::::::::::::::::
XP_006 MELKNKVQDLENQLRITQVSAPPLLHNMSDHEQHVFQRCSSSFWRSNGDSSPCLNISSIS
190 200 210 220 230 240
210 220
pF1KB6 --------------------------------------AGSMTPKSPSTDIFDMIPFSPI
::::::::::::::::::::::
XP_006 VTPINSPDSRLSLGLLIPPPSKCGFPKPVSESSIPRPHAGSMTPKSPSTDIFDMIPFSPI
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB6 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
::::::::::::::::::::::::::::::::::::
XP_006 SHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFK
310 320 330 340 350 360
290 300
pF1KB6 MGLTLEGTVFCLDPLDSRC
XP_006 MGLTLEGTVFCLDPLDSRC
370
>--
initn: 310 init1: 310 opt: 310 Z-score: 271.4 bits: 58.6 E(85289): 2.2e-08
Smith-Waterman score: 310; 100.0% identity (100.0% similar) in 43 aa overlap (262-304:337-379)
240 250 260 270 280 290
pF1KB6 PTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLE
::::::::::::::::::::::::::::::
XP_006 PTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLE
310 320 330 340 350 360
300
pF1KB6 GTVFCLDPLDSRC
:::::::::::::
XP_006 GTVFCLDPLDSRC
370
304 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:48:42 2016 done: Fri Nov 4 20:48:43 2016
Total Scan time: 5.640 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]