FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB3014, 1010 aa 1>>>pF1KB3014 1010 - 1010 aa - 1010 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5763+/-0.000995; mu= 19.6293+/- 0.060 mean_var=65.9747+/-13.375, 0's: 0 Z-trim(103.2): 26 B-trim: 0 in 0/51 Lambda= 0.157901 statistics sampled from 7267 (7278) to 7267 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.571), E-opt: 0.2 (0.224), width: 16 Scan time: 3.390 The best scores are: opt bits E(32554) CCDS13627.1 GART gene_id:2618|Hs108|chr21 (1010) 6593 1511.6 0 CCDS13628.1 GART gene_id:2618|Hs108|chr21 ( 433) 2839 656.3 3.9e-188 >>CCDS13627.1 GART gene_id:2618|Hs108|chr21 (1010 aa) initn: 6593 init1: 6593 opt: 6593 Z-score: 8107.0 bits: 1511.6 E(32554): 0 Smith-Waterman score: 6593; 99.9% identity (100.0% similar) in 1010 aa overlap (1-1010:1-1010) 10 20 30 40 50 60 pF1KB3 MAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB3 FCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB3 TAQWKAFTKPEEACSFILSADFPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQEKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TAQWKAFTKPEEACSFILSADFPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQEKAF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB3 GAAGETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GAAGETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB3 QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNGPKVLEFNCRFGDPECQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNGPKVLEFNCRFGDPECQV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB3 ILPLLKSDLYEVIQSTLDGLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ILPLLKSDLYEVIQSTLDGLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB3 QALGLEVFHAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QALGLEVFHAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB3 IGFRAIAFLQQPRSLTYKESGVDIAAGNMLVKKIQPLAKATSRSGCKVDLGGFAGLFDLK .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VGFRAIAFLQQPRSLTYKESGVDIAAGNMLVKKIQPLAKATSRSGCKVDLGGFAGLFDLK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB3 AAGFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AAGFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSC 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB3 GKLDLSVTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GKLDLSVTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB3 HLERITEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 HLERITEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB3 IYSHSLLPVLRSGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 IYSHSLLPVLRSGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB3 HLSEEEMARTFNCGVGAVLVVSKEQTEQILRDIQQHKEEAWVIGSVVARAEGSPRVKVKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 HLSEEEMARTFNCGVGAVLVVSKEQTEQILRDIQQHKEEAWVIGSVVARAEGSPRVKVKN 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB3 LIESMQINGSVLKNGSLTNHFSFEKKKARVAVLISGTGSNLQALIDSTREPNSSAQIDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LIESMQINGSVLKNGSLTNHFSFEKKKARVAVLISGTGSNLQALIDSTREPNSSAQIDIV 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB3 ISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILS 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB3 GPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEA 910 920 930 940 950 960 970 980 990 1000 1010 pF1KB3 VPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEE :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEE 970 980 990 1000 1010 >>CCDS13628.1 GART gene_id:2618|Hs108|chr21 (433 aa) initn: 2839 init1: 2839 opt: 2839 Z-score: 3491.1 bits: 656.3 E(32554): 3.9e-188 Smith-Waterman score: 2839; 99.8% identity (100.0% similar) in 433 aa overlap (1-433:1-433) 10 20 30 40 50 60 pF1KB3 MAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB3 FCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FCKEKKIEFVVVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB3 TAQWKAFTKPEEACSFILSADFPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQEKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TAQWKAFTKPEEACSFILSADFPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQEKAF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB3 GAAGETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GAAGETIVIEELLDGEEVSCLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB3 QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNGPKVLEFNCRFGDPECQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNGPKVLEFNCRFGDPECQV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB3 ILPLLKSDLYEVIQSTLDGLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ILPLLKSDLYEVIQSTLDGLLCTSLPVWLENHTALTVVMASKGYPGDYTKGVEITGFPEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB3 QALGLEVFHAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QALGLEVFHAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYRKD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB3 IGFRAIAFLQQPRSLTYKESGVDIAAGNMLVKKIQPLAKATSRSGCKVDLGGFAGLFDLK .:::::::::::: CCDS13 VGFRAIAFLQQPR 430 1010 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:00:53 2016 done: Mon Nov 7 04:00:54 2016 Total Scan time: 3.390 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]