FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6160, 116 aa 1>>>pF1KE6160 116 - 116 aa - 116 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9829+/-0.000471; mu= 12.8199+/- 0.029 mean_var=63.0438+/-12.355, 0's: 0 Z-trim(116.2): 5 B-trim: 0 in 0/53 Lambda= 0.161530 statistics sampled from 16832 (16836) to 16832 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.847), E-opt: 0.2 (0.517), width: 16 Scan time: 1.520 The best scores are: opt bits E(32554) CCDS12940.1 GALP gene_id:85569|Hs108|chr19 ( 116) 779 188.5 7.7e-49 >>CCDS12940.1 GALP gene_id:85569|Hs108|chr19 (116 aa) initn: 779 init1: 779 opt: 779 Z-score: 990.3 bits: 188.5 E(32554): 7.7e-49 Smith-Waterman score: 779; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE6 MAPPSVPLVLLLVLLLSLAETPASAPAHRGRGGWTLNSAGYLLGPVLHLPQMGDQDGKRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAPPSVPLVLLLVLLLSLAETPASAPAHRGRGGWTLNSAGYLLGPVLHLPQMGDQDGKRE 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 TALEILDLWKAIDGLPYSHPPQPSKRNVMETFAKPEIGDLGMLSMKIPKEEDVLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 TALEILDLWKAIDGLPYSHPPQPSKRNVMETFAKPEIGDLGMLSMKIPKEEDVLKS 70 80 90 100 110 116 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:58:23 2016 done: Tue Nov 8 09:58:23 2016 Total Scan time: 1.520 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]