Result of FASTA (omim) for
pFN21AE5101
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5101, 95 aa
1>>>pF1KE5101 95 - 95 aa - 95 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3000+/-0.000272; mu= 13.7920+/- 0.017
mean_var=45.4231+/- 9.159, 0's: 0 Z-trim(118.1): 34 B-trim: 1623 in 2/47
Lambda= 0.190299
statistics sampled from 30694 (30728) to 30694 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.36), width: 16
Scan time: 4.070
The best scores are: opt bits E(85289)
NP_001158308 (OMIM: 606683) FXYD domain-containing ( 95) 615 175.1 1.5e-44
NP_001158303 (OMIM: 606683) FXYD domain-containing ( 95) 615 175.1 1.5e-44
NP_001158309 (OMIM: 606683) FXYD domain-containing ( 95) 615 175.1 1.5e-44
NP_071286 (OMIM: 606683) FXYD domain-containing io ( 95) 615 175.1 1.5e-44
NP_001158304 (OMIM: 606683) FXYD domain-containing ( 95) 615 175.1 1.5e-44
NP_001265647 (OMIM: 602359) phospholemman precurso ( 92) 258 77.1 4.6e-15
NP_005022 (OMIM: 602359) phospholemman precursor [ ( 92) 258 77.1 4.6e-15
XP_016882363 (OMIM: 602359) PREDICTED: phospholemm ( 92) 258 77.1 4.6e-15
NP_001265646 (OMIM: 602359) phospholemman precurso ( 92) 258 77.1 4.6e-15
NP_068702 (OMIM: 602359) phospholemman precursor [ ( 92) 258 77.1 4.6e-15
XP_016882364 (OMIM: 602359) PREDICTED: phospholemm ( 110) 258 77.2 5.3e-15
XP_016882365 (OMIM: 602359) PREDICTED: phospholemm ( 110) 258 77.2 5.3e-15
NP_001129483 (OMIM: 604996) FXYD domain-containing ( 87) 193 59.2 1e-09
XP_016882366 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 193 59.2 1e-09
XP_016882367 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 193 59.2 1e-09
NP_005962 (OMIM: 604996) FXYD domain-containing io ( 87) 193 59.2 1e-09
NP_001129479 (OMIM: 604996) FXYD domain-containing ( 144) 193 59.4 1.6e-09
NP_067614 (OMIM: 154020,601814) sodium/potassium-t ( 64) 188 57.8 2.1e-09
NP_001671 (OMIM: 154020,601814) sodium/potassium-t ( 66) 188 57.8 2.1e-09
NP_775183 (OMIM: 616926) FXYD domain-containing io ( 89) 156 49.1 1.2e-06
NP_001171892 (OMIM: 616926) FXYD domain-containing ( 89) 156 49.1 1.2e-06
NP_071289 (OMIM: 606684) FXYD domain-containing io ( 80) 145 46.0 8.9e-06
NP_001129480 (OMIM: 604996) FXYD domain-containing ( 96) 137 43.9 4.7e-05
NP_068710 (OMIM: 604996) FXYD domain-containing io ( 113) 137 43.9 5.4e-05
XP_005259053 (OMIM: 604996) PREDICTED: FXYD domain ( 113) 137 43.9 5.4e-05
NP_001129484 (OMIM: 604996) FXYD domain-containing ( 113) 137 43.9 5.4e-05
XP_011525334 (OMIM: 604996) PREDICTED: FXYD domain ( 170) 137 44.0 7.6e-05
NP_001307842 (OMIM: 606669) FXYD domain-containing ( 147) 125 40.7 0.00066
NP_001158077 (OMIM: 606669) FXYD domain-containing ( 178) 125 40.8 0.00077
NP_054883 (OMIM: 606669) FXYD domain-containing io ( 178) 125 40.8 0.00077
NP_659003 (OMIM: 606669) FXYD domain-containing io ( 178) 125 40.8 0.00077
>>NP_001158308 (OMIM: 606683) FXYD domain-containing ion (95 aa)
initn: 615 init1: 615 opt: 615 Z-score: 920.9 bits: 175.1 E(85289): 1.5e-44
Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
70 80 90
pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
:::::::::::::::::::::::::::::::::::
NP_001 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
>>NP_001158303 (OMIM: 606683) FXYD domain-containing ion (95 aa)
initn: 615 init1: 615 opt: 615 Z-score: 920.9 bits: 175.1 E(85289): 1.5e-44
Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
70 80 90
pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
:::::::::::::::::::::::::::::::::::
NP_001 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
>>NP_001158309 (OMIM: 606683) FXYD domain-containing ion (95 aa)
initn: 615 init1: 615 opt: 615 Z-score: 920.9 bits: 175.1 E(85289): 1.5e-44
Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
70 80 90
pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
:::::::::::::::::::::::::::::::::::
NP_001 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
>>NP_071286 (OMIM: 606683) FXYD domain-containing ion tr (95 aa)
initn: 615 init1: 615 opt: 615 Z-score: 920.9 bits: 175.1 E(85289): 1.5e-44
Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
70 80 90
pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
:::::::::::::::::::::::::::::::::::
NP_071 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
>>NP_001158304 (OMIM: 606683) FXYD domain-containing ion (95 aa)
initn: 615 init1: 615 opt: 615 Z-score: 920.9 bits: 175.1 E(85289): 1.5e-44
Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR
10 20 30 40 50 60
70 80 90
pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
:::::::::::::::::::::::::::::::::::
NP_001 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN
70 80 90
>>NP_001265647 (OMIM: 602359) phospholemman precursor [H (92 aa)
initn: 318 init1: 238 opt: 258 Z-score: 391.5 bits: 77.1 E(85289): 4.6e-15
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84)
10 20 30 40 50
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
.::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_001 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
10 20 30 40 50
60 70 80 90
pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
::::.:.:::. :. : .::. .. :
NP_001 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_005022 (OMIM: 602359) phospholemman precursor [Homo (92 aa)
initn: 318 init1: 238 opt: 258 Z-score: 391.5 bits: 77.1 E(85289): 4.6e-15
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84)
10 20 30 40 50
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
.::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_005 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
10 20 30 40 50
60 70 80 90
pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
::::.:.:::. :. : .::. .. :
NP_005 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>XP_016882363 (OMIM: 602359) PREDICTED: phospholemman i (92 aa)
initn: 318 init1: 238 opt: 258 Z-score: 391.5 bits: 77.1 E(85289): 4.6e-15
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84)
10 20 30 40 50
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
.::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..:
XP_016 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
10 20 30 40 50
60 70 80 90
pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
::::.:.:::. :. : .::. .. :
XP_016 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_001265646 (OMIM: 602359) phospholemman precursor [H (92 aa)
initn: 318 init1: 238 opt: 258 Z-score: 391.5 bits: 77.1 E(85289): 4.6e-15
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84)
10 20 30 40 50
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
.::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_001 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
10 20 30 40 50
60 70 80 90
pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
::::.:.:::. :. : .::. .. :
NP_001 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
>>NP_068702 (OMIM: 602359) phospholemman precursor [Homo (92 aa)
initn: 318 init1: 238 opt: 258 Z-score: 391.5 bits: 77.1 E(85289): 4.6e-15
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84)
10 20 30 40 50
pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
.::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_068 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
10 20 30 40 50
60 70 80 90
pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
::::.:.:::. :. : .::. .. :
NP_068 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
60 70 80 90
95 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 21:05:05 2016 done: Mon Nov 7 21:05:06 2016
Total Scan time: 4.070 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]