FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5101, 95 aa 1>>>pF1KE5101 95 - 95 aa - 95 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.2959+/-0.00053; mu= 13.9436+/- 0.032 mean_var=47.4115+/- 9.378, 0's: 0 Z-trim(111.6): 16 B-trim: 6 in 1/49 Lambda= 0.186266 statistics sampled from 12483 (12498) to 12483 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.384), width: 16 Scan time: 1.500 The best scores are: opt bits E(32554) CCDS8387.1 FXYD6 gene_id:53826|Hs108|chr11 ( 95) 615 171.6 6.4e-44 CCDS73400.1 FXYD2 gene_id:100533181|Hs108|chr11 ( 144) 463 130.9 1.8e-31 CCDS58184.1 FXYD2 gene_id:100533181|Hs108|chr11 ( 112) 361 103.4 2.6e-23 CCDS12445.1 FXYD1 gene_id:5348|Hs108|chr19 ( 92) 258 75.7 4.7e-15 >>CCDS8387.1 FXYD6 gene_id:53826|Hs108|chr11 (95 aa) initn: 615 init1: 615 opt: 615 Z-score: 902.0 bits: 171.6 E(32554): 6.4e-44 Smith-Waterman score: 615; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95) 10 20 30 40 50 60 pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 10 20 30 40 50 60 70 80 90 pF1KE5 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN ::::::::::::::::::::::::::::::::::: CCDS83 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 70 80 90 >>CCDS73400.1 FXYD2 gene_id:100533181|Hs108|chr11 (144 aa) initn: 641 init1: 458 opt: 463 Z-score: 678.6 bits: 130.9 E(32554): 1.8e-31 Smith-Waterman score: 463; 85.9% identity (91.8% similar) in 85 aa overlap (1-83:1-85) 10 20 30 40 50 60 pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 10 20 30 40 50 60 70 80 90 pF1KE5 CKCSFNQKPR--APGDEEAQVENLITANATEPQKAEN :::::::::: :: ..: . . . CCDS73 CKCSFNQKPRNRAPESRELKCSHQVEGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGL 70 80 90 100 110 120 >>CCDS58184.1 FXYD2 gene_id:100533181|Hs108|chr11 (112 aa) initn: 367 init1: 357 opt: 361 Z-score: 532.1 bits: 103.4 E(32554): 2.6e-23 Smith-Waterman score: 361; 65.3% identity (78.9% similar) in 95 aa overlap (1-91:1-95) 10 20 30 40 50 pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILS-- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILRPQ 10 20 30 40 50 60 60 70 80 90 pF1KE5 --RRCKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN :. . .. : . .. ..: ... .:: CCDS58 EMRKPRWRTSSPPMQQSPRKQRTEVQPSGGRRQPQGGRGPVLLWQKIPLWGQ 70 80 90 100 110 >>CCDS12445.1 FXYD1 gene_id:5348|Hs108|chr19 (92 aa) initn: 318 init1: 238 opt: 258 Z-score: 383.7 bits: 75.7 E(32554): 4.7e-15 Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (4-83:7-84) 10 20 30 40 50 pF1KE5 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL .::: .::. . ::. :: ::: ::::.:.:::::.: .:: .:::..: CCDS12 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL 10 20 30 40 50 60 70 80 90 pF1KE5 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN ::::.:.:::. :. : .::. .. : CCDS12 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 60 70 80 90 95 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:05:04 2016 done: Mon Nov 7 21:05:05 2016 Total Scan time: 1.500 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]