Restriction map for pFN21AF0417
 (Circular) (Six-base) MAPSORT of: pFN21AF0417.seq  Check: 2074  from: 1  to: 6322



pFN21AF0417  6322 bp

 With 182 enzymes: SgfI * 

                        October 20, 2009 10:35  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:   2073    3520    2073 
   Size:       1447    4875
 
AatII G_ACGT'C

Cuts at:    278     331     414     600    1536    4132     278 
   Size:         53      83     186     936    2596    2468

  Fragments arranged by size: 

                2596    2468     936     186      83      53
 
AccI GT'mk_AC

Cuts at:   1937    3665    1937 
   Size:       1728    4594
 
Acc65I G'GTAC_C

Cuts at:   3643    3643 
   Size:       6322
 
AclI AA'CG_TT

Cuts at:   1563    4449    4822    1563 
   Size:       2886     373    3063

  Fragments arranged by size: 

                3063    2886     373
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:   1632    2536    4385    5769    6037    1632 
   Size:        904    1849    1384     268    1917

  Fragments arranged by size: 

                1917    1849    1384     904     268
 
AfeI AGC'GCT

Cuts at:   2324    2324 
   Size:       6322
 
AflII C'TTAA_G

Cuts at:    820    1017     820 
   Size:        197    6125
 
AflIII A'CryG_T

Cuts at:   1203    2578    2580    5221    6198    1203 
   Size:       1375       2    2641     977    1327

  Fragments arranged by size: 

                2641    1375    1327     977       2
 
AgeI A'CCGG_T

Cuts at:   5153    5153 
   Size:       6322
 
AhdI GACnn_n'nnGTC

Cuts at:   5051    5051 
   Size:       6322
 
AleI CACnn'nnGTG

Cuts at:   1166    1166 
   Size:       6322
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1184    2579    1184 
   Size:       1395    4927
 
AlwNI CAG_nnn'CTG

Cuts at:   2662    4065    5637    2662 
   Size:       1403    1572    3347

  Fragments arranged by size: 

                3347    1572    1403
 
ApaI G_GGCC'C

Cuts at:   2892    2928    3163    3184    3373    2892 
   Size:         36     235      21     189    5841

  Fragments arranged by size: 

                5841     235     189      36      21
 
ApaLI G'TGCA_C

Cuts at:   2462    4379    5535    2462 
   Size:       1917    1156    3249

  Fragments arranged by size: 

                3249    1917    1156
 
ApoI r'AATT_y

Cuts at:   1493    3631    3857    4009    6118    1493 
   Size:       2138     226     152    2109    1697

  Fragments arranged by size: 

                2138    2109    1697     226     152
 
AseI AT'TA_AT

Cuts at:    160    1032    4876     160 
   Size:        872    3844    1606

  Fragments arranged by size: 

                3844    1606     872
 
AsiSI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       6322
 
AvaI C'yCGr_G

Cuts at:   1870    1943    2885    2943    3017    3115    3156    3162    3214 
   Size:         73     942      58      74      98      41       6      52

Cuts at:   3214    3313    3647    1870 
   Size:         99     334    4545

  Fragments arranged by size: 

                4545     942     334      99      98      74      73      58
                  52      41       6
 
BaeI ACnnnnGTAyCnnnnnnn_nnnnn'

Cuts at:   2567    2600    2567 
   Size:         33    6289
 
BamHI G'GATC_C

Cuts at:   2071    2760    3062    3652    4019    2071 
   Size:        689     302     590     367    4374

  Fragments arranged by size: 

                4374     689     590     367     302
 
BanI G'GyrC_C

Cuts at:    618     943    1160    1787    2135    2878    2953    3350    3643 
   Size:        325     217     627     348     743      75     397     293

Cuts at:   3643    5098     618 
   Size:       1455    1842

  Fragments arranged by size: 

                1842    1455     743     627     397     348     325     293
                 217      75
 
BanII G_rGCy'C

Cuts at:   1391    2376    2892    2928    2981    3163    3184    3373    3641 
   Size:        985     516      36      53     182      21     189     268

Cuts at:   3641    1391 
   Size:       4072

  Fragments arranged by size: 

                4072     985     516     268     189     182      53      36
                  21
 
BbeI G_GCGC'C

Cuts at:   2957    2957 
   Size:       6322
 
BbsI GAAGACnn'nnnn_

Cuts at:    928    1899    2308     928 
   Size:        971     409    4942

  Fragments arranged by size: 

                4942     971     409
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1903    1937    4513    4547    1903 
   Size:         34    2576      34    3678

  Fragments arranged by size: 

                3678    2576      34      34
 
BciVI GTATCCnnnnn_n'

Cuts at:   3579    4214    5424    3579 
   Size:        635    1210    4477

  Fragments arranged by size: 

                4477    1210     635
 
BclI T'GATC_A

Cuts at:   1548    1548 
   Size:       6322
 
BfrBI ATG'CAT

Cuts at:   3045    3045 
   Size:       6322
 
BglI GCCn_nnn'nGGC

Cuts at:    136     243     365     436    1067    1672    2009    2673    2814 
   Size:        107     122      71     631     605     337     664     141

Cuts at:   2814    2887    4933     136 
   Size:         73    2046    1525

  Fragments arranged by size: 

                2046    1525     664     631     605     337     141     122
                 107      73      71
 
BglII A'GATC_T

Cuts at:   2265    6317    2265 
   Size:       4052    2270
 
BlpI GC'TnA_GC

Cuts at:   3739    3739 
   Size:       6322
 
Bme1580I G_kGCm'C

Cuts at:   1790    2466    2883    2892    2928    3163    3184    3373    4383 
   Size:        676     417       9      36     235      21     189    1010

Cuts at:   4383    5539    1790 
   Size:       1156    2573

  Fragments arranged by size: 

                2573    1156    1010     676     417     235     189      36
                  21       9
 
BmgBI CAC'GTC

Cuts at:   1318    1318 
   Size:       6322
 
BmrI ACTGGGnnnn_n'

Cuts at:    442     858     911     994    1393    1417    3185    3614    4053 
   Size:        416      53      83     399      24    1768     429     439

Cuts at:   4053    5011     442 
   Size:        958    1753

  Fragments arranged by size: 

                1768    1753     958     439     429     416     399      83
                  53      24
 
BmtI G_CTAG'C

Cuts at:   1056    1056 
   Size:       6322
 
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   2236    2236 
   Size:       6322
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    2254    3274    3280    3431    4982    1239 
   Size:       1015    1020       6     151    1551    2579

  Fragments arranged by size: 

                2579    1551    1020    1015     151       6
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:   2116    4447    5312    5610    2116 
   Size:       2331     865     298    2828

  Fragments arranged by size: 

                2828    2331     865     298
 
BsaI GGTCTCn'nnnn_

Cuts at:    882    1499    2438    4985     882 
   Size:        617     939    2547    2219

  Fragments arranged by size: 

                2547    2219     939     617
 
BsaAI yAC'GTr

Cuts at:    493    1204    2581    4113     493 
   Size:        711    1377    1532    2702

  Fragments arranged by size: 

                2702    1532    1377     711
 
BsaBI GATnn'nnATC

Cuts at:   2270    6316    2270 
   Size:       4046    2276
 
BsaHI Gr'CG_yC

Cuts at:    275     328     411     597    1533    2954    4129    4511    5146 
   Size:         53      83     186     936    1421    1175     382     635

Cuts at:   5146     275 
   Size:       1451

  Fragments arranged by size: 

                1451    1421    1175     936     635     382     186      83
                  53
 
BsaWI w'CCGG_w

Cuts at:   2074    2902    4755    5153    5427    5574    5985    2074 
   Size:        828    1853     398     274     147     411    2411

  Fragments arranged by size: 

                2411    1853     828     411     398     274     147
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:   1178    1208    1373    1403    2069    2099    2837    2867    3247 
   Size:         30     165      30     666      30     738      30     380

Cuts at:   3247    3277    1178 
   Size:         30    4223

  Fragments arranged by size: 

                4223     738     666     380     165      30      30      30
                  30      30
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:   1186    2456    3428    1186 
   Size:       1270     972    4080

  Fragments arranged by size: 

                4080    1270     972
 
BseYI C'CCAG_C

Cuts at:   2041    2723    2911    3026    3110    3497    5525    6021    2041 
   Size:        682     188     115      84     387    2028     496    2342

  Fragments arranged by size: 

                2342    2028     682     496     387     188     115      84
            
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:   1163    1736    1163 
   Size:        573    5749
 
BsiEI CG_ry'CG

Cuts at:   1540    1815    2001    3772    4533    5561    1540 
   Size:        275     186    1771     761    1028    2301

  Fragments arranged by size: 

                2301    1771    1028     761     275     186
 
BsiHKAI G_wGCw'C

Cuts at:   2217    2466    3552    3558    4383    4468    5539    2217 
   Size:        249    1086       6     825      85    1071    3000

  Fragments arranged by size: 

                3000    1086    1071     825     249      85       6
 
BsmI GAATG_Cn'

Cuts at:   3833    3926    3833 
   Size:         93    6229
 
Bsp1286I G_dGCh'C

Cuts at:   1391    1790    2217    2376    2466    2883    2892    2928    2981 
   Size:        399     427     159      90     417       9      36      53

Cuts at:   2981    3163    3184    3373    3552    3558    3641    4383    4468 
   Size:        182      21     189     179       6      83     742      85

Cuts at:   4468    5539    1391 
   Size:       1071    2174

  Fragments arranged by size: 

                2174    1071     742     427     417     399     189     182
                 179     159      90      85      83      53      36      21
                   9       6
 
BspEI T'CCGG_A

Cuts at:   2074    2902    5985    2074 
   Size:        828    3083    2411

  Fragments arranged by size: 

                3083    2411     828
 
BspHI T'CATG_A

Cuts at:   4211    5941    4211 
   Size:       1730    4592
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:    844    2073    2905    3520    3677     844 
   Size:       1229     832     615     157    3489

  Fragments arranged by size: 

                3489    1229     832     615     157
 
BsrBI CCG'CTC

Cuts at:   1394    1823    2125    2220    3103    4209    1394 
   Size:        429     302      95     883    1106    3507

  Fragments arranged by size: 

                3507    1106     883     429     302      95
 
BsrDI GCAATG_nn'

Cuts at:     65    1248    4817    4991      65 
   Size:       1183    3569     174    1396

  Fragments arranged by size: 

                3569    1396    1183     174
 
BsrFI r'CCGG_y

Cuts at:   1700    1810    2024    3071    3446    4966    5153    1700 
   Size:        110     214    1047     375    1520     187    2869

  Fragments arranged by size: 

                2869    1520    1047     375     214     187     110
 
BsrGI T'GTAC_A

Cuts at:     96      96 
   Size:       6322
 
BssHII G'CGCG_C

Cuts at:   1925    1925 
   Size:       6322
 
BssSI C'ACGA_G

Cuts at:   3543    3551    3557    4382    5394    3543 
   Size:          8       6     825    1012    4471

  Fragments arranged by size: 

                4471    1012     825       8       6
 
BstAPI GCAn_nnn'nTGC

Cuts at:    794     794 
   Size:       6322
 
BstBI TT'CG_AA

Cuts at:   5126    5126 
   Size:       6322
 
BstEII G'GTnAC_C

Cuts at:   1184    3507    1184 
   Size:       2323    3999
 
BstXI CCAn_nnnn'nTGG

Cuts at:   2188    2863    2188 
   Size:        675    5647
 
BstYI r'GATC_y

Cuts at:   1972    2071    2265    2760    3062    3652    4019    4404    4421 
   Size:         99     194     495     302     590     367     385      17

Cuts at:   4421    5873    5959    5971    6317    1972 
   Size:       1452      86      12     346    1977

  Fragments arranged by size: 

                1977    1452     590     495     385     367     346     302
                 194      99      86      17      12
 
Bsu36I CC'TnA_GG

Cuts at:   2055    3345    2055 
   Size:       1290    5032
 
BtgI C'CryG_G

Cuts at:    513    1065    2115    3572    3586     513 
   Size:        552    1050    1457      14    3249

  Fragments arranged by size: 

                3249    1457    1050     552      14
 
BtgZI GCGATGnnnnnnnnnn'nnnn_

Cuts at:    487    1170    1226     487 
   Size:        683      56    5583

  Fragments arranged by size: 

                5583     683      56
 
BtsI GCAGTG_nn'

Cuts at:   3838    4632    4652    3838 
   Size:        794      20    5508

  Fragments arranged by size: 

                5508     794      20
 
ClaI AT'CG_AT

Cuts at:   1554    1554 
   Size:       6322
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:    529     564     529 
   Size:         35    6287
 
DraI TTT'AAA

Cuts at:   3626    3626 
   Size:       6322
 
DrdI GACnn_nn'nnGTC

Cuts at:    809    1316    5329     809 
   Size:        507    4013    1802

  Fragments arranged by size: 

                4013    1802     507
 
EaeI y'GGCC_r

Cuts at:      8      62    1487    1537    1812    1830    2533    2775    3033 
   Size:         54    1425      50     275      18     703     242     258

Cuts at:   3033    3104    3769    4658    6287       8 
   Size:         71     665     889    1629      43

  Fragments arranged by size: 

                1629    1425     889     703     665     275     258     242
                  71      54      50      43      18
 
EagI C'GGCC_G

Cuts at:   1537    1812    3769    1537 
   Size:        275    1957    4090

  Fragments arranged by size: 

                4090    1957     275
 
EarI CTCTTCn'nnn_

Cuts at:   1353    2052    2595    2684    2969    4252    1353 
   Size:        699     543      89     285    1283    3423

  Fragments arranged by size: 

                3423    1283     699     543     285      89
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:    387    1451    1589    2040    3433    4909    5283    5429     387 
   Size:       1064     138     451    1393    1476     374     146    1280

  Fragments arranged by size: 

                1476    1393    1280    1064     451     374     146     138
            
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    1632    2254    2536    3274    3280    3431    4385    4982 
   Size:        393     622     282     738       6     151     954     597

Cuts at:   4982    5769    6037    1239 
   Size:        787     268    1524

  Fragments arranged by size: 

                1524     954     787     738     622     597     393     282
                 268     151       6
 
EcoO109I rG'GnC_Cy

Cuts at:   2059    2185    2238    2924    3088    3119    3180    3181    3232 
   Size:        126      53     686     164      31      61       1      51

Cuts at:   3232    3242    3249    3330    3369    3370    2059 
   Size:         10       7      81      39       1    5011

  Fragments arranged by size: 

                5011     686     164     126      81      61      53      51
                  39      31      10       7       1       1
 
EcoRI G'AATT_C

Cuts at:   3631    4009    3631 
   Size:        378    5944
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:   3475    3475 
   Size:       6322
 
FspI TGC'GCA

Cuts at:   4828    4828 
   Size:       6322
 
HaeII r_GCGC'y

Cuts at:   1678    2103    2326    2784    2957    5469    1678 
   Size:        425     223     458     173    2512    2531

  Fragments arranged by size: 

                2531    2512     458     425     223     173
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:   1373    1405    1540    1572    2837    2869    3247    3279    4963 
   Size:         32     135      32    1265      32     378      32    1684

Cuts at:   4963    4995    5037    5069    1373 
   Size:         32      42      32    2626

  Fragments arranged by size: 

                2626    1684    1265     378     135      42      32      32
                  32      32      32      32
 
HincII GTy'rAC

Cuts at:    669    1657    1938    3666    3912     669 
   Size:        988     281    1728     246    3079

  Fragments arranged by size: 

                3079    1728     988     281     246
 
HindIII A'AGCT_T

Cuts at:    748     748 
   Size:       6322
 
HpaI GTT'AAC

Cuts at:   3912    3912 
   Size:       6322
 
KasI G'GCGC_C

Cuts at:   2953    2953 
   Size:       6322
 
KpnI G_GTAC'C

Cuts at:   3647    3647 
   Size:       6322
 
MfeI C'AATT_G

Cuts at:   3921    3921 
   Size:       6322
 
MluI A'CGCG_T

Cuts at:   6198    6198 
   Size:       6322
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:   1305    2289    5436    5620    1305 
   Size:        984    3147     184    2007

  Fragments arranged by size: 

                3147    2007     984     184
 
MscI TGG'CCA

Cuts at:     10      64    1489    1832    2535      10 
   Size:         54    1425     343     703    3797

  Fragments arranged by size: 

                3797    1425     703     343      54
 
MslI CAynn'nnrTG

Cuts at:    518    1166    2615    3044    4280    4639    4798     518 
   Size:        648    1449     429    1236     359     159    2042

  Fragments arranged by size: 

                2042    1449    1236     648     429     359     159
 
MspA1I CmG'CkG

Cuts at:   1606    2232    2643    2758    2934    2960    3339    3738    4415 
   Size:        626     411     115     176      26     379     399     677

Cuts at:   4415    5563    5808    1606 
   Size:       1148     245    2120

  Fragments arranged by size: 

                2120    1148     677     626     411     399     379     245
                 176     115      26
 
NaeI GCC'GGC

Cuts at:   2026    3073    2026 
   Size:       1047    5275
 
NarI GG'CG_CC

Cuts at:   2954    2954 
   Size:       6322
 
NcoI C'CATG_G

Cuts at:    513    1065     513 
   Size:        552    5770
 
NdeI CA'TA_TG

Cuts at:    387     387 
   Size:       6322
 
NgoMIV G'CCGG_C

Cuts at:   2024    3071    2024 
   Size:       1047    5275
 
NheI G'CTAG_C

Cuts at:   1052    1052 
   Size:       6322
 
NotI GC'GGCC_GC

Cuts at:   3769    3769 
   Size:       6322
 
NsiI A_TGCA'T

Cuts at:   3047    3047 
   Size:       6322
 
NspI r_CATG'y

Cuts at:   1132    1229    2470    2624    3045    3680    5225    1132 
   Size:         97    1241     154     421     635    1545    2229

  Fragments arranged by size: 

                2229    1545    1241     635     421     154      97
 
PasI CC'CwG_GG

Cuts at:   1348    2063    1348 
   Size:        715    5607
 
PciI A'CATG_T

Cuts at:   5221    5221 
   Size:       6322
 
PflMI CCAn_nnn'nTGG

Cuts at:   1108    1108 
   Size:       6322
 
PfoI T'CCnGG_A

Cuts at:   2283    2820    3006    2283 
   Size:        537     186    5599

  Fragments arranged by size: 

                5599     537     186
 
PmeI GTTT'AAAC

Cuts at:   3626    3626 
   Size:       6322
 
PmlI CAC'GTG

Cuts at:   2581    2581 
   Size:       6322
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   4391    4423    5904    5936    4391 
   Size:         32    1481      32    4777

  Fragments arranged by size: 

                4777    1481      32      32
 
PpuMI rG'GwC_Cy

Cuts at:   2059    3242    3330    2059 
   Size:       1183      88    5051

  Fragments arranged by size: 

                5051    1183      88
 
PshAI GACnn'nnGTC

Cuts at:   1613    1613 
   Size:       6322
 
PsiI TTA'TAA

Cuts at:   3892    3892 
   Size:       6322
 
PspOMI G'GGCC_C

Cuts at:   2888    2924    3159    3180    3369    2888 
   Size:         36     235      21     189    5841

  Fragments arranged by size: 

                5841     235     189      36      21
 
PstI C_TGCA'G

Cuts at:    830    2390    3096    3359    3378    3674     830 
   Size:       1560     706     263      19     296    3478

  Fragments arranged by size: 

                3478    1560     706     296     263      19
 
PvuI CG_AT'CG

Cuts at:   2001    2001 
   Size:       6322
 
PvuII CAG'CTG

Cuts at:   2960    2960 
   Size:       6322
 
SalI G'TCGA_C

Cuts at:   1936    3664    1936 
   Size:       1728    4594
 
SapI GCTCTTCn'nnn_

Cuts at:   2052    2969    2052 
   Size:        917    5405
 
SbfI CC_TGCA'GG

Cuts at:   3359    3378    3674    3359 
   Size:         19     296    6007

  Fragments arranged by size: 

                6007     296      19
 
ScaI AGT'ACT

Cuts at:   4570    6282    4570 
   Size:       1712    4610
 
SfcI C'TryA_G

Cuts at:    826    1045    2386    2572    3092    3355    3374    3670    4805 
   Size:        219    1341     186     520     263      19     296    1135

Cuts at:   4805    5486    5677     826 
   Size:        681     191    1471

  Fragments arranged by size: 

                1471    1341    1135     681     520     296     263     219
                 191     186      19
 
SfiI GGCCn_nnn'nGGCC

Cuts at:   2673    2673 
   Size:       6322
 
SfoI GGC'GCC

Cuts at:   2955    2955 
   Size:       6322
 
SgfI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       6322
 
SgrAI Cr'CCGG_yG

Cuts at:   1700    3071    1700 
   Size:       1371    4951
 
SmaI CCC'GGG

Cuts at:   1872    2887    3019    3117    3158    3164    3216    3315    3649 
   Size:       1015     132      98      41       6      52      99     334

Cuts at:   3649    1872 
   Size:       4545

  Fragments arranged by size: 

                4545    1015     334     132      99      98      52      41
                   6
 
SmlI C'TyrA_G

Cuts at:    820    1017    1943    2095    4426    5327    5589     820 
   Size:        197     926     152    2331     901     262    1553

  Fragments arranged by size: 

                2331    1553     926     901     262     197     152
 
SnaBI TAC'GTA

Cuts at:    493    4113     493 
   Size:       3620    2702
 
SpeI A'CTAG_T

Cuts at:    152     152 
   Size:       6322
 
SphI G_CATG'C

Cuts at:   1132    3680    1132 
   Size:       2548    3774
 
SrfI GCCC'GGGC

Cuts at:   3164    3315    3164 
   Size:        151    6171
 
SspI AAT'ATT

Cuts at:      5      52    4246       5 
   Size:         47    4194    2081

  Fragments arranged by size: 

                4194    2081      47
 
StuI AGG'CCT

Cuts at:   1517    2606    2676    1517 
   Size:       1089      70    5163

  Fragments arranged by size: 

                5163    1089      70
 
StyI C'CwwG_G

Cuts at:    513    1065    2181    2856    3237    3602    3761     513 
   Size:        552    1116     675     381     365     159    3074

  Fragments arranged by size: 

                3074    1116     675     552     381     365     159
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:    325    1580    2123    3124    4349    4366    4519    4704    5149 
   Size:       1255     543    1001    1225      17     153     185     445

Cuts at:   5149     325 
   Size:       1498

  Fragments arranged by size: 

                1498    1255    1225    1001     543     445     185     153
                  17
 
TatI w'GTAC_w

Cuts at:     96     370     450     483     534    1977    4568    6280      96 
   Size:        274      80      33      51    1443    2591    1712     138

  Fragments arranged by size: 

                2591    1712    1443     274     138      80      51      33
            
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   2069    2101    6282    6314    2069 
   Size:         32    4181      32    2077

  Fragments arranged by size: 

                4181    2077      32      32
 
Tth111I GACn'n_nGTC

Cuts at:   1316    3535    1316 
   Size:       2219    4103
 
XbaI T'CTAG_A

Cuts at:   3658    3658 
   Size:       6322
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:   2513    2513 
   Size:       6322
 
XhoI C'TCGA_G

Cuts at:   1943    1943 
   Size:       6322
 
XmaI C'CCGG_G

Cuts at:   1870    2885    3017    3115    3156    3162    3214    3313    3647 
   Size:       1015     132      98      41       6      52      99     334

Cuts at:   3647    1870 
   Size:       4545

  Fragments arranged by size: 

                4545    1015     334     132      99      98      52      41
                   6
 
XmnI GAAnn'nnTTC

Cuts at:   4451    4451 
   Size:       6322
 
ZraI GAC'GTC

Cuts at:    276     329     412     598    1534    4130     276 
   Size:         53      83     186     936    2596    2468

  Fragments arranged by size: 

                2596    2468     936     186      83      53
 

 Enzymes that do cut:

     AarI    AatII     AccI   Acc65I     AclI     AcuI     AfeI    AflII
   AflIII     AgeI     AhdI     AleI     AlfI    AlwNI     ApaI    ApaLI
     ApoI     AseI    AsiSI     AvaI     BaeI    BamHI     BanI    BanII
     BbeI     BbsI     BcgI    BciVI     BclI    BfrBI     BglI    BglII
     BlpI Bme1580I    BmgBI     BmrI     BmtI     BplI     BpmI    BpuEI
     BsaI    BsaAI    BsaBI    BsaHI    BsaWI    BsaXI    BseRI    BseYI
     BsgI    BsiEI  BsiHKAI     BsmI Bsp1286I    BspEI    BspHI    BspMI
    BsrBI    BsrDI    BsrFI    BsrGI   BssHII    BssSI   BstAPI    BstBI
   BstEII    BstXI    BstYI   Bsu36I     BtgI    BtgZI     BtsI     ClaI
    CspCI     DraI     DrdI     EaeI     EagI     EarI     EciI  Eco57MI
 EcoO109I    EcoRI     FalI     FspI    HaeII    Hin4I   HincII  HindIII
     HpaI     KasI     KpnI     MfeI     MluI     MmeI     MscI     MslI
   MspA1I     NaeI     NarI     NcoI     NdeI   NgoMIV     NheI     NotI
     NsiI     NspI     PasI     PciI    PflMI     PfoI     PmeI     PmlI
     PpiI    PpuMI    PshAI     PsiI   PspOMI     PstI     PvuI    PvuII
     SalI     SapI     SbfI     ScaI     SfcI     SfiI     SfoI     SgfI
    SgrAI     SmaI     SmlI    SnaBI     SpeI     SphI     SrfI     SspI
     StuI     StyI    TaqII     TatI     TstI  Tth111I     XbaI     XcmI
     XhoI     XmaI     XmnI     ZraI

 Enzymes that do not cut: 

     AloI     AscI    AvrII    BbvCI   Bpu10I    BsiWI    BsmBI  BstZ17I
   DraIII  EcoICRI    EcoNI    EcoRV     FseI    FspAI     NruI     PacI
    PspXI     PsrI    RsrII     SacI    SacII    SanDI    SexAI     SwaI
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