FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1104, 161 aa 1>>>pF1KE1104 161 - 161 aa - 161 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0986+/-0.000538; mu= 13.4471+/- 0.033 mean_var=62.7017+/-12.581, 0's: 0 Z-trim(113.7): 4 B-trim: 0 in 0/52 Lambda= 0.161970 statistics sampled from 14289 (14291) to 14289 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.439), width: 16 Scan time: 2.110 The best scores are: opt bits E(32554) CCDS43365.1 TIFAB gene_id:497189|Hs108|chr5 ( 161) 1088 261.7 1.4e-70 >>CCDS43365.1 TIFAB gene_id:497189|Hs108|chr5 (161 aa) initn: 1088 init1: 1088 opt: 1088 Z-score: 1380.7 bits: 261.7 E(32554): 1.4e-70 Smith-Waterman score: 1088; 100.0% identity (100.0% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE1 MEKPLTVLRVSLYHPTLGPSAFANVPPRLQHDTSPLLLGRGQDAHLQLQLPRLSRRHLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MEKPLTVLRVSLYHPTLGPSAFANVPPRLQHDTSPLLLGRGQDAHLQLQLPRLSRRHLSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EPYLEKGSALLAFCLKALSRKGCVWVNGLTLRYLEQVPLSTVNRVSFSGIQMLVRVEEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EPYLEKGSALLAFCLKALSRKGCVWVNGLTLRYLEQVPLSTVNRVSFSGIQMLVRVEEGT 70 80 90 100 110 120 130 140 150 160 pF1KE1 SLEAFVCYFHVSPSPLIYRPEAEETDEWEGISQGQPPPGSG ::::::::::::::::::::::::::::::::::::::::: CCDS43 SLEAFVCYFHVSPSPLIYRPEAEETDEWEGISQGQPPPGSG 130 140 150 160 161 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:03:16 2016 done: Mon Nov 7 04:03:17 2016 Total Scan time: 2.110 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]