Result of FASTA (ccds) for
pFN21AB8348
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8348, 479 aa
1>>>pF1KB8348 479 - 479 aa - 479 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2263+/-0.00084; mu= 10.2605+/- 0.051
mean_var=134.1142+/-26.215, 0's: 0 Z-trim(111.7): 72 B-trim: 0 in 0/52
Lambda= 0.110748
statistics sampled from 12548 (12622) to 12548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.736), E-opt: 0.2 (0.388), width: 16
Scan time: 3.310
The best scores are: opt bits E(32554)
CCDS13658.1 ERG gene_id:2078|Hs108|chr21 ( 479) 3340 544.9 7e-155
CCDS46648.1 ERG gene_id:2078|Hs108|chr21 ( 486) 3322 542.0 5.2e-154
CCDS46649.1 ERG gene_id:2078|Hs108|chr21 ( 387) 2726 446.7 2e-125
CCDS58789.1 ERG gene_id:2078|Hs108|chr21 ( 363) 1650 274.8 1.1e-73
CCDS82674.1 ERG gene_id:2078|Hs108|chr21 ( 455) 1650 274.9 1.3e-73
CCDS13657.1 ERG gene_id:2078|Hs108|chr21 ( 462) 1650 274.9 1.3e-73
CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 ( 386) 1274 214.7 1.4e-55
CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 ( 419) 1274 214.8 1.5e-55
CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11 ( 452) 1274 214.8 1.6e-55
CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 ( 259) 1267 213.5 2.2e-55
CCDS2428.1 FEV gene_id:54738|Hs108|chr2 ( 238) 611 108.7 7.2e-24
CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11 ( 354) 599 106.9 3.7e-23
CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21 ( 469) 453 83.6 4.9e-16
CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11 ( 225) 445 82.1 6.7e-16
CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11 ( 441) 445 82.3 1.1e-15
CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11 ( 485) 445 82.3 1.2e-15
CCDS13575.1 GABPA gene_id:2551|Hs108|chr21 ( 454) 408 76.4 7e-14
CCDS12600.1 ERF gene_id:2077|Hs108|chr19 ( 548) 407 76.3 9.1e-14
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7 ( 454) 405 75.9 9.8e-14
CCDS1164.1 ETV3 gene_id:2117|Hs108|chr1 ( 143) 390 73.2 2e-13
CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19 ( 249) 394 74.0 2e-13
CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19 ( 342) 394 74.1 2.6e-13
CCDS44250.1 ETV3 gene_id:2117|Hs108|chr1 ( 512) 396 74.5 2.9e-13
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7 ( 374) 393 74.0 3.2e-13
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7 ( 419) 393 74.0 3.5e-13
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7 ( 437) 393 74.0 3.6e-13
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7 ( 459) 393 74.0 3.7e-13
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7 ( 477) 393 74.0 3.8e-13
CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19 ( 155) 380 71.6 6.6e-13
CCDS30893.1 ETV3L gene_id:440695|Hs108|chr1 ( 361) 385 72.7 7.5e-13
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3 ( 510) 379 71.8 1.9e-12
CCDS14283.1 ELK1 gene_id:2002|Hs108|chrX ( 428) 369 70.2 5e-12
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17 ( 207) 363 69.0 5.5e-12
CCDS4819.1 ETV7 gene_id:51513|Hs108|chr6 ( 341) 366 69.6 5.9e-12
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17 ( 445) 363 69.2 1e-11
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17 ( 484) 363 69.2 1.1e-11
CCDS59165.1 ELK1 gene_id:2002|Hs108|chrX ( 95) 351 66.9 1.1e-11
CCDS56425.1 ETV7 gene_id:51513|Hs108|chr6 ( 317) 358 68.3 1.3e-11
CCDS9060.1 ELK3 gene_id:2004|Hs108|chr12 ( 407) 353 67.6 2.8e-11
CCDS1457.1 ELK4 gene_id:2005|Hs108|chr1 ( 405) 346 66.5 6.2e-11
CCDS1456.1 ELK4 gene_id:2005|Hs108|chr1 ( 431) 346 66.5 6.5e-11
>>CCDS13658.1 ERG gene_id:2078|Hs108|chr21 (479 aa)
initn: 3340 init1: 3340 opt: 3340 Z-score: 2894.1 bits: 544.9 E(32554): 7e-155
Smith-Waterman score: 3340; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
370 380 390 400 410 420
430 440 450 460 470
pF1KB8 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
430 440 450 460 470
>>CCDS46648.1 ERG gene_id:2078|Hs108|chr21 (486 aa)
initn: 3322 init1: 3322 opt: 3322 Z-score: 2878.5 bits: 542.0 E(32554): 5.2e-154
Smith-Waterman score: 3322; 99.6% identity (99.8% similar) in 478 aa overlap (2-479:9-486)
10 20 30 40 50
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
:. :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
430 440 450 460 470 480
pF1KB8 HLGTYY
::::::
CCDS46 HLGTYY
>>CCDS46649.1 ERG gene_id:2078|Hs108|chr21 (387 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2365.3 bits: 446.7 E(32554): 2e-125
Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 387 aa overlap (93-479:1-387)
70 80 90 100 110 120
pF1KB8 RVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
::::::::::::::::::::::::::::::
CCDS46 MVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
10 20 30
130 140 150 160 170 180
pF1KB8 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB8 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB8 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB8 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB8 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
280 290 300 310 320 330
430 440 450 460 470
pF1KB8 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
340 350 360 370 380
>>CCDS58789.1 ERG gene_id:2078|Hs108|chr21 (363 aa)
initn: 2553 init1: 1650 opt: 1650 Z-score: 1436.5 bits: 274.8 E(32554): 1.1e-73
Smith-Waterman score: 2509; 93.8% identity (93.8% similar) in 387 aa overlap (93-479:1-363)
70 80 90 100 110 120
pF1KB8 RVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
::::::::::::::::::::::::::::::
CCDS58 MVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
10 20 30
130 140 150 160 170 180
pF1KB8 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB8 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
::::::::::::::::::::::::::::::::::::::::::
CCDS58 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNT------------------
100 110 120 130
250 260 270 280 290 300
pF1KB8 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ------DLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
140 150 160 170 180
310 320 330 340 350 360
pF1KB8 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
190 200 210 220 230 240
370 380 390 400 410 420
pF1KB8 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
250 260 270 280 290 300
430 440 450 460 470
pF1KB8 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
310 320 330 340 350 360
>>CCDS82674.1 ERG gene_id:2078|Hs108|chr21 (455 aa)
initn: 3167 init1: 1650 opt: 1650 Z-score: 1435.1 bits: 274.9 E(32554): 1.3e-73
Smith-Waterman score: 3123; 95.0% identity (95.0% similar) in 479 aa overlap (1-479:1-455)
10 20 30 40 50 60
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNT----------------
190 200 210 220
250 260 270 280 290 300
pF1KB8 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 --------DLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
230 240 250 260 270
310 320 330 340 350 360
pF1KB8 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
340 350 360 370 380 390
430 440 450 460 470
pF1KB8 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
400 410 420 430 440 450
>>CCDS13657.1 ERG gene_id:2078|Hs108|chr21 (462 aa)
initn: 3149 init1: 1650 opt: 1650 Z-score: 1435.0 bits: 274.9 E(32554): 1.3e-73
Smith-Waterman score: 3105; 94.6% identity (94.8% similar) in 478 aa overlap (2-479:9-462)
10 20 30 40 50
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
:. :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNT---------
190 200 210 220 230
240 250 260 270 280 290
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
:::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ---------------DLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
240 250 260 270
300 310 320 330 340 350
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB8 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
340 350 360 370 380 390
420 430 440 450 460 470
pF1KB8 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
400 410 420 430 440 450
pF1KB8 HLGTYY
::::::
CCDS13 HLGTYY
460
>>CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 (386 aa)
initn: 1751 init1: 1210 opt: 1274 Z-score: 1111.5 bits: 214.7 E(32554): 1.4e-55
Smith-Waterman score: 1761; 64.6% identity (80.1% similar) in 407 aa overlap (78-479:10-386)
50 60 70 80 90 100
pF1KB8 SPRVPQQDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSY
.:.:: .:::.: .:.::. .. :::.::
CCDS59 MEGGLAGERARESPVDCSVSKCSKLVGGGESNPMNYNSY
10 20 30
110 120 130 140 150 160
pF1KB8 MEEKHMPPP-NMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGK
:.::. ::: ::::::::::::::::::. .:::::::::.:::.: ... .:::.:::
CCDS59 MDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGK
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB8 ELCKMTKDDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGG
:::::.:.:: : : ::...::::: ::::. :
CCDS59 ELCKMNKEDFLRATTLYNTEVLLSHLSYLRESSL--------------------------
100 110 120 130
230 240 250 260 270 280
pF1KB8 AAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQ-PSPSTVPKTED
:. ::. . . ..:.... : :. ::.:: :.. . .:. . .:. :. .
CCDS59 LAY---NTTSHTDQSSRLSVKEDPSYDSVRRGAW-GNNMNSGLNKSPPLGGAQTISKNTE
140 150 160 170 180
290 300 310 320 330 340
pF1KB8 QRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPD
:::: ::::::::::::::::::::::::::::::::::.:.::::::::::::::::::
CCDS59 QRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPD
190 200 210 220 230 240
350 360 370 380 390 400
pF1KB8 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS59 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTE
250 260 270 280 290 300
410 420 430 440 450 460
pF1KB8 SSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNT-
::.::::::. :: ::::: ::.::: ::: ..::::::::.: . ::.:::::::::
CCDS59 SSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPN
310 320 330 340 350 360
470
pF1KB8 --RLPTSHMPSHLGTYY
: :..:.:::::.::
CCDS59 VPRHPNTHVPSHLGSYY
370 380
>>CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 (419 aa)
initn: 1866 init1: 1210 opt: 1274 Z-score: 1111.0 bits: 214.8 E(32554): 1.5e-55
Smith-Waterman score: 1910; 63.5% identity (79.9% similar) in 452 aa overlap (33-479:1-419)
10 20 30 40 50 60
pF1KB8 STIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQPPA
::::.: :::: :..: :::.:..:: .
CCDS53 MTASGSPDYGQPHKINPLPPQQEWINQP-V
10 20
70 80 90 100 110 120
pF1KB8 RVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPP-NMTTN
::..: : . ..::::.:: .:::.: .:.::. .. :::.:::.::. ::: :::::
CCDS53 RVNVKREYD--HMNGSRESPVDCSVSKCSKLVGGGESNPMNYNSYMDEKNGPPPPNMTTN
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB8 ERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTP
:::::::::::::. .:::::::::.:::.: ... .:::.::::::::.:.:: : :
CCDS53 ERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATT
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB8 SYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEAT
::...::::: ::::. : :. ::. . . .
CCDS53 LYNTEVLLSHLSYLRESSL--------------------------LAY---NTTSHTDQS
150 160 170
250 260 270 280 290 300
pF1KB8 QRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQ-PSPSTVPKTEDQRPQLDPYQILGPTS
.:.... : :. ::.:: :.. . .:. . .:. :. .:::: ::::::::::
CCDS53 SRLSVKEDPSYDSVRRGAW-GNNMNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTS
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB8 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::::
CCDS53 SRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
240 250 260 270 280 290
370 380 390 400 410 420
pF1KB8 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
::::::::::::::::::::::::::::::::::::::::::: :::.::::::. :: :
CCDS53 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPS
300 310 320 330 340 350
430 440 450 460 470
pF1KB8 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNT---RLPTSHMPSHLGT
:::: ::.::: ::: ..::::::::.: . ::.::::::::: : :..:.:::::.
CCDS53 YHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSHLGS
360 370 380 390 400 410
pF1KB8 YY
::
CCDS53 YY
>>CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11 (452 aa)
initn: 1888 init1: 1210 opt: 1274 Z-score: 1110.5 bits: 214.8 E(32554): 1.6e-55
Smith-Waterman score: 2033; 63.7% identity (80.2% similar) in 485 aa overlap (1-479:1-452)
10 20 30 40 50
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTP-HLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQ
: .::::::::::.:::::. :::. :: :..::::.: :::: :..: :::.:..:
CCDS44 MDGTIKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWINQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 PPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPP-NM
: .::..: : . ..::::.:: .:::.: .:.::. .. :::.:::.::. ::: ::
CCDS44 P-VRVNVKREYD--HMNGSRESPVDCSVSKCSKLVGGGESNPMNYNSYMDEKNGPPPPNM
70 80 90 100 110
120 130 140 150 160 170
pF1KB8 TTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQR
::::::::::::::::. .:::::::::.:::.: ... .:::.::::::::.:.:: :
CCDS44 TTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 LTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYP
: ::...::::: ::::. : :. ::. .
CCDS44 ATTLYNTEVLLSHLSYLRESSL--------------------------LAY---NTTSHT
180 190 200
240 250 260 270 280 290
pF1KB8 EATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQ-PSPSTVPKTEDQRPQLDPYQILG
. ..:.... : :. ::.:: :.. . .:. . .:. :. .:::: :::::::
CCDS44 DQSSRLSVKEDPSYDSVRRGAW-GNNMNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILG
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB8 PTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSK
:::::::::::::::::::::::::::.:.::::::::::::::::::::::::::::::
CCDS44 PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSK
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB8 PNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPY
:::::::::::::::::::::::::::::::::::::::::::::: :::.::::::. :
CCDS44 PNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISY
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB8 MGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNT---RLPTSHMPSH
: ::::: ::.::: ::: ..::::::::.: . ::.::::::::: : :..:.:::
CCDS44 MPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSH
390 400 410 420 430 440
pF1KB8 LGTYY
::.::
CCDS44 LGSYY
450
>>CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 (259 aa)
initn: 1309 init1: 1210 opt: 1267 Z-score: 1107.9 bits: 213.5 E(32554): 2.2e-55
Smith-Waterman score: 1267; 72.5% identity (86.5% similar) in 251 aa overlap (233-479:10-259)
210 220 230 240 250 260
pF1KB8 LTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTG
::. . . ..:.... : :. ::.:: :
CCDS59 MDPGSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAW-G
10 20 30
270 280 290 300 310 320
pF1KB8 HGHPTPQSKAAQ-PSPSTVPKTEDQRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELL
.. . .:. . .:. :. .:::: :::::::::::::::::::::::::::::::
CCDS59 NNMNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELL
40 50 60 70 80 90
330 340 350 360 370 380
pF1KB8 SDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKV
:::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKV
100 110 120 130 140 150
390 400 410 420 430 440
pF1KB8 HGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVT
:::::::::::::::::::::: :::.::::::. :: ::::: ::.::: ::: ..:::
CCDS59 HGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVT
160 170 180 190 200 210
450 460 470
pF1KB8 SSSFFAAPNPYWNSPTGGIYPNT---RLPTSHMPSHLGTYY
:::::.: . ::.::::::::: : :..:.:::::.::
CCDS59 SSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSHLGSYY
220 230 240 250
479 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:10:56 2016 done: Sat Nov 5 02:10:57 2016
Total Scan time: 3.310 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]