FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0237, 158 aa 1>>>pF1KE0237 158 - 158 aa - 158 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4079+/-0.000656; mu= 6.2241+/- 0.040 mean_var=187.8329+/-37.487, 0's: 0 Z-trim(118.2): 2 B-trim: 0 in 0/52 Lambda= 0.093581 statistics sampled from 19043 (19045) to 19043 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.851), E-opt: 0.2 (0.585), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS33145.1 CYS1 gene_id:192668|Hs108|chr2 ( 158) 1065 154.1 3.3e-38 >>CCDS33145.1 CYS1 gene_id:192668|Hs108|chr2 (158 aa) initn: 1065 init1: 1065 opt: 1065 Z-score: 799.4 bits: 154.1 E(32554): 3.3e-38 Smith-Waterman score: 1065; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE0 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 VAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 VAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG 70 80 90 100 110 120 130 140 150 pF1KE0 NVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREYCR :::::::::::::::::::::::::::::::::::::: CCDS33 NVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREYCR 130 140 150 158 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:09:27 2016 done: Mon Nov 7 04:09:27 2016 Total Scan time: 2.320 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]